© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0251900.1
CGCAATCATCAGACGCTACAAATTGCAAATTGCTTACATGATACGCTACTTCAACAAATCTACCTGCATTACAGTTAGGCGAGAAAAGGATTAACTATGTTACACTACTGTTACAACTTACAAGTGAACCGATCTGCGGTCGCTAAATCTGACTTTCTTCACCAACTCCATTCGAATGTATTGCCAGCAGCACTGCATTGAACCACCTCTATGAACTTGAATCTGCATTCTTAGCTATAACAAAACTATCTTCTAGGCTCTTATCCATAGGGGTGTCATTTCTGTCACTACTGGAATCCGACAAGGTGGTATCATCATCATCAGAGGCCGAATCAAAGCTAGATCTCTTCCTCGTATCGTTGACTCTCCTCCCTTTCAGTTCAAGACGCCTGCATTTCCGAGCCTTGCGTTTGCCCCTTGGCAGAATTTCATGGTGTGATTCAGCATTTGTGTCTTCTGGACCCCTTTTAGCCTCTTTATTTGTCTTCTCGGTTGCCAGTACATCTGCTGACAAAGAGTCACTTTCCTCTACCTTCCGGCGCTTGTTTGGATTCATCATTGCAGCCTGGTCAACAAGGTGAGCCCAGTCATTCCTGTTCCTAAGACAATCGTTAACAGCATGTAAATAGTTGGGGTATGCATTGTTTTCCACGTTGGGTTTACTTAAATCCCCCCAATGCTGGCGAATAGCGTTGCACAGTTCACCATATGTTATGTTTGTATTTTTGCTAATGATTTCCTCAATCAACCCAGGTAAATCATGTGAAACACCTCTATCTATTGGAGCATCATTTCCTACGCCAGAGGTGGCTCCAGTTGAACAAATGCCACGATTTCTCTGTTCTGATTCTATATTTTCAGTAAATTTGCATGAGTCTTTTGCAGCAAGGACACGTTCTGTGCTACTATCTCTATGCCTCCGTTCAACACTAGACACCTTTCCTGTCTTCTTGGTCTCATCATTATCTCTCCATGCATCATCTTTGTTCCTCTTCTTTAAGACCAGTGCTTGATCCCTTCCTCCATGTGCTGAAGACCGTTTTGAGAACACACTAGCTCCAGTTGGATGTAGCATCTGCATGGTAGATGCTTGATGACAACGTGGCACCCTTGGTACTCTGGGGGAGCTGTTCAATTGTTGATGTAATAACAATGCAAGCTGTTCATCGCTCAATGAAGCTGTTGTTTCAGTAGATTGCAGCTCAGCCGATGCTGAACTATTGGAAGTGTCCTGTGTGATATGAATAGAGCGGTGGTGGATCTTGTCCTTTCTTTGGTAAAAGCTCAAAGGCATTGCCTTATTACGAGAATGTAAGGGTGCCACTTCACCTTGTAATGACCCTGGTGGAGCGTTTCCTTCAGTTGATGTCTTTTGCAACTGCTCCTTTGGCACTATAAATCTATTTTTGGCAGAAGATACATATGTTCTACTTCCTTGAGATGATTTTGGCGCAGACGGAACAAAGCCTTTCAATTGAACTTTATCAGAGGATCTTGTGCGATCCTGGGAACTCTCAGATTTTTTTGCAAAATCATTTTCGCTGTCAGCGGATGAGACCAACCTTGTCTGATCCTTCTTTACCAAACGAACAGTAGTTTCTTCTGATGATGGTTCTAAACTTGAGTTTGGATGCTCTGGTATTGTGTGCATCGGATTTTGTGTTTCAGACTTTGGATGTTGATAAACTAAGTCAGATGCTAACTTGGACGAATGCCTCTGAAGGGTTGATAACATTGCAGTATCTTGTTTTCCACTTTTATGCTCATCACTTACAAACTGGATAGCCTCGGTTCTCTCATGATCATCTGTAGATGCTTCCTTCTTGATAGTCAATGATTCTGACTGGTTAGTCTGTAAATCCGGTACACCACCAACAACCAGAAGATTTGAAGTTTGATTTGATTGCTTCTGAAGATCCAGACCCTCATTCATTTTCTCAGGAGCAGCATCGCTCTGGACATCTCCATTTGATCGTTTGGCATCATCCCTTTTCACAACTCCATTCGATCTTACTCCAGTCTGTAAACCTACATTTTGATTCCCGTCTAGTCCTTCATACACGCTACCCTTCACAAATCGTGAGTGCACTTCTTGCTCTGCTACAGCTGCCGTTGTTGCAACTCCTGAGGATATCACCAATCGCTTGGACTCCTTAGGTTCATATTTCTTTAGCATCCCAGTAATTTCCTTCGAGGCAGAGCACTTCTTATCCCCACTTCGTTCTGAGGATGAAGCCCTCTTCTTCTTAGCTTCAACAAGCACGTGCAAATCAGAATTTACCATGTTTGTTTTGGCATGCTGATCCTCACTAGCTGGCACATCAAAATCCCTTTTCTTCTCACAACCATTGTCCCAAGTATCAGGCTCTACAATGCTAATGGATGTTCCTCTCTTCTTTGCATCACTTGGTGGAGATGTCCTCTTTGCGTCATCGTCCACAGAGTGCTCAACGCCATCCACCTTATCGCCGCAAATGCTCAGCGTCCTGACATAATTCTTGTCCTTGTGTATGGCTCCAAGGCGGAGAGGGAACCTAGTCTCTGCCTTTTCCTTGCGCTTCTCTCTAGCCAGCGCAAATAGAGCGTTGGCACCGTCCTTGTCATCAGCCCAGTAGGGGAATTCGCAGTAGCGGAAGCCGAATCTCTTGGGTACGTACCCAGCACAGCGCCATAGGGCGGACGAGAATACAGGGGAGGGTGCGGCGCTGCGGAATAGGGCGGTGTCTGTACCGCCTGGAAGCCCGTGGACATGGACACGGGAGGGGAGAGGGACTTCAGCCCATCGGCGGTACAACGGCCGTGGGCGGTGGGTGGGCAGCTCGGCCAGGAGCTCGGCGACCTCAGCCTCGTCGGCGGAGGAGGGGGCGCGCTTGGCCTTGCAGTTGTGGCAAGAGAAAGAGATGTGCACGCCGCGGACGTAGCGGGCGCACCGCGTGTGCACCCAGACGTTGCACTCGTCGCAGCTCACCATCTCCTCCCCGTCGTCGTACGTGATGCCGCACGAGCAGTCCACCGTCCACGAGCCATCCCCCCAATCATCGGCGGGCGCCGGAGCGGGCGTGGTGGCGGCTGCGGCGGTGGTGATGTGGGCGGCGGGCGGCCGCTCCAGACGGTGCAAGCGGCCCCCCTTCATCGGCGGCGAGTAGAGGGAAACCCTAATTTCGACTCCCCTTCGGATCTAAGCAAGCAAAAGAGCGGGTGAAGCGAGGCAAGGATGCAACCGGTGCTGTAACCAAATCATACTTACATGCGATTCCTCGGGCTGCACATCGACACCCTGCGCCCTCGGTAAGCCCCGAACTGCCGAATCGAGCACTGCACCACCAGGTCGAGGCGGAAAATCGGCGGGACGGGGTGGTGGAGAGACGAGAGGCAGCCGCCGGAGCGGGTTGCCACCACCAAACCTTGTCGATTCCAGAGATTGGGCAGACAATCTCCCACACAAAGGGGAGGAGGAATACAGGAGACACGGACGACGGCGGCGGCAGAGGACGGCGGCGACGCGGAGGGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0251900.1 | 4 | 8118436 | G | A |
| Osa04LNT0251900.1 | 4 | 8118724 | A | G |
| Osa04LNT0251900.1 | 4 | 8118988 | T | C |
| Osa04LNT0251900.1 | 4 | 8119320 | T | C |
| Osa04LNT0251900.1 | 4 | 8119679 | C | T |
| Osa04LNT0251900.1 | 4 | 8120918 | G | A |
| Osa04LNT0251900.1 | 4 | 8120926 | C | T |
| Osa04LNT0251900.1 | 4 | 8121662 | T | C |
| Osa04LNT0251900.1 | 4 | 8121665 | C | T |
| Osa04LNT0251900.1 | 4 | 8121690 | T | A |
| Osa04LNT0251900.1 | 4 | 8122070 | T | C |
| Osa04LNT0251900.1 | 4 | 8123117 | C | T |
| Osa04LNT0251900.1 | 4 | 8123209 | T | C |
| Osa04LNT0251900.1 | 4 | 8123224 | T | A |
| Osa04LNT0251900.1 | 4 | 8123692 | A | G |
| Osa04LNT0251900.1 | 4 | 8123810 | A | T |
| Osa04LNT0251900.1 | 4 | 8123857 | T | C |
| Osa04LNT0251900.1 | 4 | 8124087 | G | C |
| Osa04LNT0251900.1 | 4 | 8125157 | T | A |
| Osa04LNT0251900.1 | 4 | 8125286 | C | T |
| Osa04LNT0251900.1 | 4 | 8126092 | A | G |
| Osa04LNT0251900.1 | 4 | 8126285 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0251900.1 | osa-miR5529 | Translation | 4.0 | 17.56 | 1 | 21 |
| Osa04LNT0251900.1 | osa-miR5803 | Cleavage | 5.0 | 22.349 | 1 | 24 |
| Osa04LNT0251900.1 | osa-miR5814 | Translation | 4.0 | 16.564 | 1 | 24 |
| Osa04LNT0251900.1 | osa-miR7692-5p | Translation | 5.0 | 16.855 | 1 | 24 |
| Osa04LNT0251900.1 | osa-miR399d | Translation | 4.0 | 15.214 | 1 | 21 |
| Osa04LNT0251900.1 | osa-miR399h | Translation | 5.0 | 15.214 | 1 | 21 |
| Osa04LNT0251900.1 | osa-miR399i | Translation | 5.0 | 15.214 | 1 | 21 |
| Osa04LNT0251900.1 | osa-miR399j | Translation | 4.0 | 15.214 | 1 | 21 |
| Osa04LNT0251900.1 | osa-miR440 | Translation | 4.5 | 14.429 | 1 | 24 |
| Osa04LNT0251900.1 | osa-miR444a-3p.2 | Cleavage | 4.5 | 22.463 | 1 | 21 |
| Osa04LNT0251900.1 | osa-miR1423-3p | Translation | 5.0 | 15.231 | 1 | 21 |
| Osa04LNT0251900.1 | osa-miR444d.2 | Cleavage | 4.5 | 22.463 | 1 | 21 |
| Osa04LNT0251900.1 | osa-miR444e | Cleavage | 4.5 | 22.463 | 1 | 21 |
| Osa04LNT0251900.1 | osa-miR1852 | Cleavage | 3.5 | 11.131 | 1 | 21 |
| Osa04LNT0251900.1 | osa-miR5071 | Translation | 4.0 | 22.171 | 1 | 21 |
| Osa04LNT0251900.1 | osa-miR5075 | Cleavage | 2.5 | 23.25 | 1 | 21 |
| Osa04LNT0251900.1 | osa-miR5492 | Cleavage | 4.5 | 9.27 | 1 | 21 |
| Osa04LNT0251900.1 | osa-miR5511 | Cleavage | 4.5 | 14.873 | 1 | 21 |
| Osa04LNT0251900.1 | osa-miR2098-3p | Translation | 4.0 | 8.486 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0251900.1 | 4 | spp4-2 | Morphological trait | Panicle/flower | RG449 | CDO456 |
| Osa04LNT0251900.1 | 4 | An8-glum | Morphological trait | Panicle/flower | nan | nan |
| Osa04LNT0251900.1 | 4 | nan | Morphological trait | Root | RM261 | RZ69 |
| Osa04LNT0251900.1 | 4 | nan | Morphological trait | Root | RM261 | RZ69 |
| Osa04LNT0251900.1 | 4 | qCCFJ-4 | Physiological trait | Source activity | RM261 | RM3785 |
| Osa04LNT0251900.1 | 4 | qSNP-4a | Morphological trait | Panicle/flower | RM401 | RM335 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)