© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0023200.1
CACACACAATTGTTCTGAGCAAACTATTGAAAACACTTGCCAAAATAATAAAGGAACAATCCATTTTTTCAGTAATACTAACTCCTTATATTAAAGGAATTAGAACAAAGACATTTATTTCGGACAGTATGTTGGGAGGTGTAGCATGTATTAGATCTTCCTTTTATCGTTCTTCTTGCGAGCGTCCCCCAAGATTGCAGCTAACTTCCTTCTAAAATTTTTTATATCTTCATGCGTGTATTCCTTCGACAACCTATTGCCTTGACAGTGCTCCATGTTTTTTAATACAAACAGCCCACATGAGACAAGATCTCCTTGTAATGGCAAATTCTGTACGACCGTGACTTCCCAGGAAGTAATTTTTTGGTCAGGCCATTGAGTTGGTATGTGCTTTTCATCTGGTTCCAACATCTGAAAATATTGCTCTACTCCTTCTAGAACTTTTCTTAGTTCCTTGTGTTGTGTGGATGAATTCGCCACGGAGTCAAGCACTTGGATGATGCGGCGTTTGGCGTGTATGACTGCCTGGTACCAATGGTTTTTCTTTTATGTTCATGGGGAGGAAAATCATATCATGCTTTAGATATCTATTTGCCGTTGCTTTAGCCATTGCCCGATCGATGATGTCTTTGGAAACGTAGTGTTCGCCATCTCTTTGTAGCAACCTTGTTATTAACGGTTTCTCTGGGAACACCGTACCTTCTGCCCTAGTCCTTGTACCTTCCTTCATATCTTTCTCACGTAGACAAGTAACGTATGCATCGATTATATGATCATCCAAATAGCTCATGCTTGATTCAGTCACCGGATTAGTCAGAATTTGCGTTGTTTTTTGGGAAATTGAGACATCATCGATATGCACCACTAGTTGTGATTCTGGTGCACTCATTATACTTTTAATGGTTTCCTCATCTTCTGCGGTGCACTTGAACTCATTGGATATTAAATTATGTGCTTGCGCATTCTTTGGTTTCTTCTTTGTAGCCCCTAAATTGTAGACGAAATCAGTATTTGATTTAATTGTTGATTTACGCAGTCTTCGTGTTGATCCTGAAAGTGACTTGGCAATGACAGGCGTTTGAGTTGGTGGGTTTGGTTTCTTTTTTTTTAATTATATGTGTTTCTTTGTTGGAACTTTTGCAAACATTTGGCTTAGAGTTCTTGGAAGTTGTTGATATTGTCTTTTCCTCTTTGAATGCAGCTATTATGTTGGTGAGTGATTGAATTTGGTTATGCATGGACTGTTGATTCTGTTTCATCTCCTTCATCTCCTTTCCTTGCTGTTCTATCAGCATGATTAGTTTTCGGGTCAGCGTCTCAGTTTCTGGGCTATCCTTGTGTGAAGTGGCATGTGTTGTGCTGTCGACGCGTTGTTCTGATGTTTTTATCTCGCTGTCACTTGCTATGTCTTGGACATTTTATTAGTATGGATGCATGATTCTGATTGTTTGCTCTTCTCGCTGTCATTTGTTACGTCTTGGACATCCTTATCAGTAGGGATACATGATTCTGATTGTTTGCTCTCTTCGCTGTCTCTTGTTATGTCTTGGACATTCTTATCTTTTCGGATTTGTGAGGATTTGGAGCATTCTATAGCAAGTGTGATGTCGTCAACAATCTAGTACAGAATAACTCATTGACGTTAGCTGGTCGAAAATAGTGCTTTGGTAGATGGTAAAAAAGTTAGCTTCCTGAGACTAGTCGTCTGTGTGCCCATTTGATGCTGTTCCCTTCCTTGTTACTTCAGGATGACAAACTACTTCCCTTTACCATTGTATTATCTTTTTTTTTGCCTTGTGCTTGTCCCAGTATTGAATAAGTGGTTTGTCGCGCATAGTATAATCTATGGTTGGATCCAAATTGTCAGCTCGTAGCTTCTCCCAGTACCATAACTGCAACAAGTACAATTGAGTAAAAACAACTTGTCTTTTGTTGGTACAAAATAATAATTGTGCAGTTGCATTACCTACAAAAGTGGTAGGTTTCCTTCAAGATTGACTCCTTTTTTTATTAATTTTTTTTAATGCTTTTCATTAGGTGGTTTAAAGTCAAGCTTGTCCAGTTAATTGCACTGATTGCATTGACATCCTCTACAAAATTTAGGTATGCCAAGCTTACATACCTTTGAGTAGTTGGGCACAGGAAAACACCGATTGATCACAAAGAGCACAAAACGGCGAATGAAATTGTCGTCATATATACCTTTGTTTGTTTGAAAATACTATTGCAAAGAAGATAATTTTATATGTGCCCCTTGCTTAGATGCTGTCTTGAATTCATCAAACAAGTCCATATTCTTGGTCTTTGGTGGTTCAAATATTTCTTCTCCTTGTGATGGCAGGTCAAGCAAATGCTCAGCGTCCCTACTGGATAGACTCAGATAGCTGCCTTGGATGTTGAATGCTTCAGCCTTTGTATCAAATTGGTTTGTAATCCACATGCACAAAATACGGTGTACATTTATCCTATGCATCTTCAGCAATCCTCCGAAGCCACATTTGTGTACAGCTTCTCATTGAGAAATACTGAAGGTTGCGATGAGGTCATAAAGGGCATGAATAGAGCATATCTGTGTGCTCTGTTTTTGGGGCTTATTTTGTTTGAAAACCTGCTCTGGTTCGTAGATTGTTGTAGTTTCATCCATTGCGGTTTGCTTCATCATATCTTCTAAGTCTTGTAGCTGACGGGCGATCGAAACGTCGAGATT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0023200.1 | 1 | 20408358 | T | C |
| Osa01LNT0023200.1 | 1 | 20408452 | A | G |
| Osa01LNT0023200.1 | 1 | 20409059 | A | G |
| Osa01LNT0023200.1 | 1 | 20409129 | T | C |
| Osa01LNT0023200.1 | 1 | 20409353 | T | A |
| Osa01LNT0023200.1 | 1 | 20409354 | A | G |
| Osa01LNT0023200.1 | 1 | 20409928 | C | T |
| Osa01LNT0023200.1 | 1 | 20410047 | G | A |
| Osa01LNT0023200.1 | 1 | 20410413 | A | G |
| Osa01LNT0023200.1 | 1 | 20410613 | A | G |
| Osa01LNT0023200.1 | 1 | 20411688 | A | G |
| Osa01LNT0023200.1 | 1 | 20411797 | C | T |
| Osa01LNT0023200.1 | 1 | 20412654 | C | T |
| Osa01LNT0023200.1 | 1 | 20412885 | A | G |
| Osa01LNT0023200.1 | 1 | 20413138 | A | G |
| Osa01LNT0023200.1 | 1 | 20413272 | T | C |
| Osa01LNT0023200.1 | 1 | 20413325 | A | G |
| Osa01LNT0023200.1 | 1 | 20413379 | T | G |
| Osa01LNT0023200.1 | 1 | 20413927 | T | C |
| Osa01LNT0023200.1 | 1 | 20414285 | T | C |
| Osa01LNT0023200.1 | 1 | 20414900 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0023200.1 | osa-miR5538 | Cleavage | 3.5 | 17.745 | 1 | 22 |
| Osa01LNT0023200.1 | osa-miR5806 | Cleavage | 5.0 | 15.784 | 1 | 21 |
| Osa01LNT0023200.1 | osa-miR812v | Translation | 4.0 | 15.948 | 1 | 24 |
| Osa01LNT0023200.1 | osa-miR156a | Translation | 4.5 | 12.409 | 1 | 20 |
| Osa01LNT0023200.1 | osa-miR156b-5p | Translation | 4.5 | 12.409 | 1 | 20 |
| Osa01LNT0023200.1 | osa-miR156c-5p | Translation | 4.5 | 12.409 | 1 | 20 |
| Osa01LNT0023200.1 | osa-miR156d | Translation | 4.5 | 12.409 | 1 | 20 |
| Osa01LNT0023200.1 | osa-miR156e | Translation | 4.5 | 12.409 | 1 | 20 |
| Osa01LNT0023200.1 | osa-miR156f-5p | Translation | 4.5 | 12.409 | 1 | 20 |
| Osa01LNT0023200.1 | osa-miR156g-5p | Translation | 4.5 | 12.409 | 1 | 20 |
| Osa01LNT0023200.1 | osa-miR156h-5p | Translation | 4.5 | 12.409 | 1 | 20 |
| Osa01LNT0023200.1 | osa-miR156i | Translation | 4.5 | 12.409 | 1 | 20 |
| Osa01LNT0023200.1 | osa-miR156j-5p | Translation | 4.5 | 12.409 | 1 | 20 |
| Osa01LNT0023200.1 | osa-miR319a-3p | Translation | 4.0 | 14.266 | 1 | 21 |
| Osa01LNT0023200.1 | osa-miR535-5p | Cleavage | 4.5 | 11.188 | 1 | 21 |
| Osa01LNT0023200.1 | osa-miR815a | Translation | 3.5 | 12.683 | 1 | 21 |
| Osa01LNT0023200.1 | osa-miR815b | Translation | 3.5 | 12.683 | 1 | 21 |
| Osa01LNT0023200.1 | osa-miR815c | Translation | 3.5 | 12.683 | 1 | 21 |
| Osa01LNT0023200.1 | osa-miR1875 | Translation | 5.0 | 15.071 | 1 | 24 |
| Osa01LNT0023200.1 | osa-miR2867-3p | Translation | 4.5 | 12.457 | 1 | 20 |
| Osa01LNT0023200.1 | osa-miR2923 | Translation | 4.5 | 15.784 | 1 | 22 |
| Osa01LNT0023200.1 | osa-miR5080 | Translation | 5.0 | 12.325 | 1 | 21 |
| Osa01LNT0023200.1 | osa-miR5487 | Cleavage | 5.0 | 6.804 | 1 | 21 |
| Osa01LNT0023200.1 | osa-miR5489 | Translation | 3.5 | 10.715 | 1 | 21 |
| Osa01LNT0023200.1 | osa-miR2275c | Cleavage | 4.5 | 11.847 | 1 | 23 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0023200.1 | 1 | qNVB-1-1 | Morphological trait | Culm/leaf | R2159 | C178 |
| Osa01LNT0023200.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0023200.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0023200.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0023200.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0023200.1 | 1 | nan | Morphological trait | Root | RM23 | RM306 |
| Osa01LNT0023200.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0023200.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)