© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0023300.1
GAAGAATGTATCTCTGCTACCAACATTGACAACTTTCACATGTACATCACACAAAACTGTAGACCGTCTTGATATATATTCCTATGATATTTTTTTTAAAAAAAAAAAAGAAGCTTAGCTTATCTTCCACTTAGATAGGACCGAGATGAACCTGATACTGAATGAGCCGAACGTGCGGACAGCAACCGAGACTGTTCGCCTTGTTTGATATCCTCAAAGGCCTCGACATCCAAAAATGGAGGATCACTCAAGATAATCTCCACATCATGCCTGTGGCTTCTCAGCAACTCCACAACCTTCGTCATTGTAGGCCTGTCGCCAGCGTTTGCTTGGGTGCATGACAGCCCAATCTGCACGACATGCATGACCTCATCCCTGATGGTATCCTCGTAGATGCTGCGGTCAGCGATCATTTCTACTGCTTTGTTCTTGTAGTGGTTCCATACCTTTGTTAACAAGAAGTGACCTCCATGTGAACCAATTGAGCCGCTACATCTTTGTCCTGTTACAAGCTCAAGAACCAGAATACCATAGCTGTAGACATCAGCCTTCTCTGTAAGATGGCCATGTGCCAAATATTCAGGAGCCATGTATCCTAGTGTTCCAGCAACACCCGTGGTGAGATGAGTTCTATCCTCTCCAAAAGCTCTTGCAAGGCCAAAATCTGTTATCTTGGGCTTAAACTTATCATCCAATAAAATATTACTGGCTTTGATATCTCTGTGGATAATCCTTGTTTCTGACTCCTCATGGAGGTAAGAAAGTCCCTCCGCTATGCCTTGAATGATATCAACCCTCAAATTCCAGGTTAAATTTCTGCTACGACTTGCATCAAACAAGAAGAGATCGAGGCTCTTGTTGAAGTAGTATTCATAAACAAGCAGGCTCTCTGGACCATTCACGCTGCAACCAAGCAGCTTAACTAGATTCTTATGACGAACTTGACTTATGAGTTCAACTTCGTTGAAAAATTGATCAACCCACTCCCTTGTATTTAGGAATAGCCTCTTCACAGCAACTTGTTTTCCATCCAAAAGAATAGCCTTGAACACAGCTCCATAGCTCCCTTGACCAAGTTTGTTTGCTGGATCAAAATAGTTTGTTGCTTTCCTTAACTCTTCGTATTTGAAATTTAAACTGGATTGTGCAATTCTCACAGGGACTCCATCTCCGTAAATATCTATGAATGATTTGGACCTTTTCTTGTTCCTAAAAATTTTCTTCTTCCATGCCAGAAAAACAACAATGAAAACAATAACAAAGGCACCAAGGGAAGAACCCAATAGTATCCAAACAACGTCATTATGCCCTGCACATTTGATGAGAGAGAATTATTAGTACAAAAAGAAAAAAGAATGACTCAAGCAGTACAGAGTAACTGGACAACAATGATTTGGCGTGTGTTGGTCAAATTAAGGTACCGAATGAACTTTTGGAAAAATAAGTCCTGACAAGTGACAACACAAACAGGAATAATTCATGGGTGTCCCCAGTAACAGATTGTAAAAGAACAACACAAAATGGTGTTAATGAGAGTACTTTTTCCTTTCCTAACGACCCCAGGAAACTTACATGTAAAAAGAAGAAGAATCACACAGAGGACAGGAATATTAGTAATACCTATGTGCTTTTAATATAGCTTTGTGAGCTTTTGTTCAGCTCTGTAAGTCTGCATACGAATAGTTTGACAGTTCCATGCAGAAAATGTAGAAAATGCTTAGGTCAAAACTGATCCAAAACCGGTTAGTTTGTTGCCGGTTTTGATAACTGATATAACTGGTTTTGAAAACTGACAACCCTCCGTTAATAAATTCTACAGGGCAAAGAAAATTGTATTCATATTTGGGCACTCCCATAGTAGAGTATTCAGTCAAAAAAGTAAAGCTTGTGGATACTTTGCTCCTGCACTTTAGTCAAGCATTTCCTTTTACTATTGTTTTAGGTGGTGTTTTTTTCTCCTGATGATGAAGATGAAGATGAAGATTAAGTTTTTTACACAAAACGAGGTGGTATTTATGTATGATTGATTGAGTTTTAATTATTATAAACTTGAAAAATATATTAATATGATATTTTAGAGCATATAAAGTTTTCACACGAAACACACCGTTTAGCAGTTTGAAAAGCATGCCACAATAATCTTAATCTTCATCCAACTCTTGTTGGAGAAAAAAACGGGACCTTAGCATGAATGCATATGATAAACCGCTGGAAAATGTCAAGATTGGGTGGCATCGAATTACAATTGAATTTAAGAACGCTGCAAAGTGGCAACCGAAAAGTCAATTATGCCGTCTGAATCTCAGCTTTTTCGAAGACTTTAACTACTAGTAGAACGCTTGAAACAGTAGTGACCTTCCGAAATTGAGAGAGAGAAATCGAATCGAATTTGCATTTACTTGATGATCCTGATCCGGCAGTGGAGTTGAGATTCCAGAAGAGGCGCGTGGAGTAGCGGAGGTAGCAGCCGGTGTAGAGCGCGCGGCCCTCCGCGGCGGCGGGCGCGCACCGCGCCGCGGCGGCCGCGGCAGCGCGGAGGCACTGGCCGCAGGCGGTGGCGTTGAGGCTCCCCCAGCACTGCGCGAGCGCGAACGCCGTGGCGCCGCCGGCGGACGCCGACCCCACCGCGTACCCGTCGCCACCCCCCGGCACCGCGGCGGAGGCGGCGACGCCCGTGACGTTGGCGAGCGCGGCGCGCACCGCGTCGGCGAACCCGCGCGGGTTGGCGCCGGTGTAGTTGCCTCCGCCCGCGCCGCCGCCGCCGACGACGCCGCAGGTGACGGCGTCGTCGGGGCCGAGGGTTTCGGAGAAGAAGGAGTAGTTGGCGTAGCGGCCGAAGCAGCCGTCGAGGTAGAGGCGGCCGCCGGCGCTCGGGTAGCACTTGGGGAGGAGGGACCTGACCTCGGCGAAGCAGAGCTTGCAGTCGACGGGGGAGAGGTCGCGGTAGCACTGGCCGAGGCCGAAGACGGCGTTGGGGTTGAGCCCCGCCGTGGTGCCGACGGCGGAGGTGCCGAAGCCGTTGGCGCTGACGTTGCTATTGAGGTCGTCCATGGCGGGCACGAAGTTGTCCGCCAGCGCGGGCCCCGACACCGCCCCGCCAGGCGCGCACTCCTGCCTCGCCACCGCCGTCCTCGGGTCCCCCGCCGCCCCGCCGCACAGGCACAGCAGCGCGAGGAGGAGGAGGAGAAGCAGCGCGGCCAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0023300.1 | 1 | 20465483 | T | C |
| Osa01LNT0023300.1 | 1 | 20465680 | G | T |
| Osa01LNT0023300.1 | 1 | 20465735 | A | T |
| Osa01LNT0023300.1 | 1 | 20467380 | C | T |
| Osa01LNT0023300.1 | 1 | 20467516 | T | C |
| Osa01LNT0023300.1 | 1 | 20467937 | C | T |
| Osa01LNT0023300.1 | 1 | 20468133 | C | T |
| Osa01LNT0023300.1 | 1 | 20469189 | T | C |
| Osa01LNT0023300.1 | 1 | 20464939 | G | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0023300.1 | osa-miR5542 | Cleavage | 5.0 | 9.361 | 1 | 21 |
| Osa01LNT0023300.1 | osa-miR1437b-5p | Cleavage | 4.5 | 14.828 | 1 | 21 |
| Osa01LNT0023300.1 | osa-miR396c-3p | Translation | 4.0 | 14.43 | 1 | 21 |
| Osa01LNT0023300.1 | osa-miR167d-5p | Translation | 5.0 | 11.168 | 1 | 21 |
| Osa01LNT0023300.1 | osa-miR167e-5p | Translation | 5.0 | 11.168 | 1 | 21 |
| Osa01LNT0023300.1 | osa-miR167f | Translation | 5.0 | 11.168 | 1 | 21 |
| Osa01LNT0023300.1 | osa-miR167g | Translation | 5.0 | 11.168 | 1 | 21 |
| Osa01LNT0023300.1 | osa-miR167h-5p | Translation | 5.0 | 11.168 | 1 | 21 |
| Osa01LNT0023300.1 | osa-miR167i-5p | Translation | 5.0 | 11.168 | 1 | 21 |
| Osa01LNT0023300.1 | osa-miR408-5p | Cleavage | 3.5 | 19.605 | 1 | 21 |
| Osa01LNT0023300.1 | osa-miR167j | Translation | 5.0 | 11.168 | 1 | 21 |
| Osa01LNT0023300.1 | osa-miR414 | Cleavage | 3.0 | 12.622 | 1 | 21 |
| Osa01LNT0023300.1 | osa-miR1423-3p | Cleavage | 5.0 | 22.052 | 1 | 21 |
| Osa01LNT0023300.1 | osa-miR1432-5p | Cleavage | 4.5 | 15.334 | 1 | 21 |
| Osa01LNT0023300.1 | osa-miR2105 | Cleavage | 4.5 | 17.092 | 1 | 20 |
| Osa01LNT0023300.1 | osa-miR3981-3p | Translation | 5.0 | 16.025 | 1 | 21 |
| Osa01LNT0023300.1 | osa-miR5495 | Cleavage | 4.5 | 11.682 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0023300.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0023300.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0023300.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0023300.1 | 1 | nan | Morphological trait | Root | RM23 | RM306 |
| Osa01LNT0023300.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0023300.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0023300.1 | 1 | qNVB-1-1 | Morphological trait | Culm/leaf | R2159 | C178 |
| Osa01LNT0023300.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)