© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0254600.1
TTTAAATTTTATGCCAAAATTTAAATTCTAAAAGAGTAGCTTGAAGTGACTGGACCTGGTTCGAGGCCAGTTCATGCCTTCCTGGCTGAAACTAAGCAGGGAATACATTTTCTTCTGCAATTACGTTGAAAAAGACATAAGACATAATTGGGTTCCTGATCGAAGCTACAGTGGAACGATGACATATCCTTCCTCCCAAAGAATATATACACATTTCATGATGTTTGTTTCAACTTACAATCAATAGTGTTCCCGCGTATCTAATCTAACCCAGGAGGGGTCTGTATTATAACAGTAATCTTGCAGGCTTATCTTTTTTTTTCAGTAAATTTTAGCATCTCCACGGAAAATATGGTGGTCAGGTGGATGCAGTTACAAGTGCTGGAATTTCACAGCTACCGTTGGTCAGTGATGAATATCTAGGCGGCAATAATGAATCCATATCAGCAAAATGTCCCTCCTCGATGTATGCCTCCTTACCTATTGGTGCGTCAAGGACAGAGTTTGGTATCGCGTCAAGAGTCTCCTCTAAGAAGGATTCAAGTGTCTTGCAATGACGCAGTGTAGAGTCAGCCTTGCGTTTCCAAAGGCCATTGCCAGGTTCCGAGTGGAATAAATTTAACAATGGCTTGACAAGTTGTCTCACGTTTGGTCTGCTGGGGCCATATTGGCCCATTATTGAATCACCATAAACCTGGTAGCTCTCAAGGATCTGGCGACGAGAAGAGCGTCTTGTCGGCATCCCATAGACTTCACTGTCCACATGCCCCAGCATGTTCCATGGATTATTATATGCAGCCCGGCCAACCATAACTCGATGTGCACCTTGTCTTATGGATGCAGTGACTTGATCAATAGTAGTTATACCTCCATTTAGAGTAAACTGCACATCTGGGAAGTCCCGCAATAAAGCAAAGTAGTATTCATATTTTAAAGGAGGAACGTTCCGATTTTCTGCAGGACTGAGGCCACTTAGCAATGCCTTCCGGGCATGAATAATGAAATGCCTAGTTGGTGATTTTGAAACAACCTTATCTACAAATTCACAAAGTTCTTCGTAGGAGTCACGATCATCAACACCAATTCTGCACTTAACGCTGACTGGGACATTACAATTGGCAGCAATAGCTGACATAGCATCCCCTACAAACTCTGGATCAAACATTAAGCGAGCACCGAAGCAACCATGACCAGCAACTTTGCCACTGGGGCAGCCACAGTTTAGGTTGATCTCATCGTACGAATAAGCATTTGCCAGTTCAGTTGCCTTCGCTAAGTTATCCAGATTACTTCCACCAATTTGCAACACAATAGGATGCTGTTCAGCAGGAAACGCTAAAAATCTATCCAAGTTATCTTTCTGATGCACGATGGTCTCCGCGACCACCATCTCCGTGTAGAGCCACGCGTGCTTCGAGATCAGCCGCGCGAGCGTCCGGTAGTGGTTGTCCGTCCAGTCCATCATCGGCGCCACGCTGAACAGCGGAGGAAGGTGCCCGCCACCTCCAGTCGCGGAGGAGCTCGCCGCGCGAGCGCGGGCGCGACACGGGCCCACGCCGCGAGCGCGCTGCGGCGGCAGGAGCGAGGCGCCGCGGATGCTGCCGGGCGCGGCCAGCGGAGGGCGCAGGGAGTGCCTCGCCACCGCCGCAGCCGACCTCACCGCGATGGCCATGCGAGCTGAGCTCTTTCTCTCTCCCGCATACGGCCGCCGCCACCTCCGCCGCCGCTGCCGCCGCCTCTCCTTGGGAAGGGTACGGGCCGCTGCGGGTGAGGAGGAGAACGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0254600.1 | 4 | 11813800 | A | G |
| Osa04LNT0254600.1 | 4 | 11814031 | A | G |
| Osa04LNT0254600.1 | 4 | 11801101 | T | A |
| Osa04LNT0254600.1 | 4 | 11801924 | G | A |
| Osa04LNT0254600.1 | 4 | 11802518 | T | G |
| Osa04LNT0254600.1 | 4 | 11802818 | T | C |
| Osa04LNT0254600.1 | 4 | 11803412 | C | T |
| Osa04LNT0254600.1 | 4 | 11803628 | T | G |
| Osa04LNT0254600.1 | 4 | 11804043 | A | T |
| Osa04LNT0254600.1 | 4 | 11804254 | G | C |
| Osa04LNT0254600.1 | 4 | 11804326 | A | T |
| Osa04LNT0254600.1 | 4 | 11804408 | A | G |
| Osa04LNT0254600.1 | 4 | 11807034 | T | C |
| Osa04LNT0254600.1 | 4 | 11808237 | A | G |
| Osa04LNT0254600.1 | 4 | 11808278 | T | C |
| Osa04LNT0254600.1 | 4 | 11808519 | T | C |
| Osa04LNT0254600.1 | 4 | 11808646 | T | C |
| Osa04LNT0254600.1 | 4 | 11808647 | T | C |
| Osa04LNT0254600.1 | 4 | 11808870 | T | C |
| Osa04LNT0254600.1 | 4 | 11809522 | A | G |
| Osa04LNT0254600.1 | 4 | 11810326 | G | C |
| Osa04LNT0254600.1 | 4 | 11810569 | A | G |
| Osa04LNT0254600.1 | 4 | 11811194 | C | T |
| Osa04LNT0254600.1 | 4 | 11811251 | A | G |
| Osa04LNT0254600.1 | 4 | 11811450 | A | G |
| Osa04LNT0254600.1 | 4 | 11812915 | A | G |
| Osa04LNT0254600.1 | 4 | 11813183 | A | C |
| Osa04LNT0254600.1 | 4 | 11813674 | G | A |
| Osa04LNT0254600.1 | 4 | 11813682 | A | G |
| Osa04LNT0254600.1 | 4 | 11814695 | C | G |
| Osa04LNT0254600.1 | 4 | 11814742 | A | G |
| Osa04LNT0254600.1 | 4 | 11807860 | T | C |
| Osa04LNT0254600.1 | 4 | 11806886 | A | G |
| Osa04LNT0254600.1 | 4 | 11807098 | A | G |
| Osa04LNT0254600.1 | 4 | 11813721 | G | A |
| Osa04LNT0254600.1 | 4 | 11807037 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0254600.1 | osa-miR5539a | Cleavage | 4.5 | 10.959 | 1 | 22 |
| Osa04LNT0254600.1 | osa-miR5539b | Cleavage | 4.5 | 10.959 | 1 | 22 |
| Osa04LNT0254600.1 | osa-miR166e-3p | Translation | 4.5 | 19.399 | 1 | 21 |
| Osa04LNT0254600.1 | osa-miR166k-3p | Translation | 5.0 | 19.399 | 1 | 21 |
| Osa04LNT0254600.1 | osa-miR166l-3p | Translation | 5.0 | 19.399 | 1 | 21 |
| Osa04LNT0254600.1 | osa-miR166m | Translation | 5.0 | 19.399 | 1 | 21 |
| Osa04LNT0254600.1 | osa-miR530-5p | Translation | 5.0 | 19.522 | 1 | 20 |
| Osa04LNT0254600.1 | osa-miR1874-3p | Cleavage | 4.0 | 13.628 | 1 | 24 |
| Osa04LNT0254600.1 | osa-miR2929 | Translation | 5.0 | 18.151 | 1 | 21 |
| Osa04LNT0254600.1 | osa-miR5522 | Translation | 5.0 | 16.829 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0254600.1 | 4 | qCCFJ-4 | Physiological trait | Source activity | RM261 | RM3785 |
| Osa04LNT0254600.1 | 4 | qSNP-4a | Morphological trait | Panicle/flower | RM401 | RM335 |
| Osa04LNT0254600.1 | 4 | spp4-2 | Morphological trait | Panicle/flower | RG449 | CDO456 |
| Osa04LNT0254600.1 | 4 | gwt4a | Morphological trait | Seed | RG788 | RG190 |
| Osa04LNT0254600.1 | 4 | gwt4a | Morphological trait | Seed | RG788 | RG190 |
| Osa04LNT0254600.1 | 4 | nan | Morphological trait | Panicle/flower | RG788 | RZ69 |
| Osa04LNT0254600.1 | 4 | qPEN-4 | Morphological trait | Panicle/flower | RG190 | RG908 |
| Osa04LNT0254600.1 | 4 | An8-glum | Morphological trait | Panicle/flower | nan | nan |
| Osa04LNT0254600.1 | 4 | nan | Morphological trait | Root | RZ69 | RG449 |
| Osa04LNT0254600.1 | 4 | nan | Morphological trait | Root | RZ69 | RG449 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)