© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0254700.1
GGTTGATAAATTGGATGGTTGCTAATAACATCATCAGGTTGCTGTGACAATATGATCTTTCTGCAAGAAAAGGTTGCAGTTATAGTGATGAAGTTGTGAGCCAAAAGGCAGAATAAAGGCACAGTGACATCTGTCACGCTGATGGTACTGAAGTACGCAAATCTGTTTACAAATTGTAGCATTTTTTTGTCATTTTTCAGTTGAGGTAGATGTGAGAGGCGACGTCTTGGATGAGCTAGTTGAAGCCCTAAAGCAGCCTGGTTTGAGCACCTGCAAACAAAACCACACCTCCAGCTGTCAATCAATCAGCTTCCAAATTTGCCAAAATTACTATAAGAAAATCTTGCAATGGTCAAGCACGTTTAATACACGTCTAATAAAACCATTTTCTATATACAGACTTAGAACATATTGTTTTTCTCAATTTTATCAAAATTATCTAATTGAATGTTGTGATTTGTCAGATACACATTAAAACAAAACCCTGCTGAAATTATCTGAACTTCGCATACCACCTGCTGAATCACTGTAAAACAAAAACATTTTTTTCTCTGAACCTTGATGTTCATCGCCAAAGTTGGGTTAGGCAGTATCCAACACATGGGCCTAAATTGTCCCTTTAGGCAATATACATACATATGAGGTAGTGTAAGAGATACATTACAGAAGAAATTTGGAGAGCAGCAACATTTACAGTGCTCTCCTGTCTAAACAAATCGTTCCTTGCTTCAATTATCTTTGGACATGTGGTCTATATATACTCTGTACATTTCAATAATCTTGAGACATGTTGTCTATACTCAGTCCATTACAATGCTCTCCAGTCCAAACAGGTGAAATGGATTGAAGCCATAACTCCTACTACGAGTATATGAAATAAGAGTATTAACAATGTATATATTTCTTACCAACAATATTGTAGATATGCAGTGATCCTTGTGGCAGTGCAATTCAAATATGGTATCTAAAATATGGGTAATTATCATAACAGGATAAACAAGCTACAAAGGATTTATGCCACATGTAAATTTACTTAATTAACTTGCAATGTCAACTGGCTGAAATAATAATTTTTCGAGATGATTACAGCACTTTAAAAGCAATAGCTTCAAAGGCTAACAACAAAAACACTATAGCTGATAAAAAAGGTACGGTAAATTATATTTCTTGCCTTCAATAGTAGAAAAGAAATAGAACTGCATTGACAAATGAAAGATGTCCAGAAATCTCAAAACTTTTTTACATATCTAGCTATCAAAGTCACATATATGCCCATTCCAGTCAAATATATGATTAAATTAAGAAATGCACAAATTGGAATACCCAGAAACTGCATCACATTAGTTTGAGCTACCATGTAATAATAATCTACTGCCACATGGGAATATGATATTGAAAATTAGCCTAAGAACAAAAGTACAGTGGAGCCCAAGAACTAATTGCCTATAGGATAAGCCCCAACCACAGGATGGCATCCATGGTCTAGCTTTGTGGTCTGCCAAAACATTTACGTGTTTTCCTCTAACAGAGCTCACCTTCACCTGCAACAATCAGGCCTCAGGACCAGAGGGGAAGTCACAGTTCCATAGCATCTCATGAGTACATGGTGTTTGAATATGTGACAATGAAGTGGACCATTGCTACAGGCCTAAGGAAGAACCAGCTCCAACAGGGGAAGAACATAAGCACTCCAGAGCCATTTCTTCAATTCAGGGGTTCCTATCAATGAAAACTTCTCAATCTCAGATGATTCACATTGCTAGCGTTCACCTTTAGAATGAATATCCTACTCTGCTCTTTTCAGCTTGGAATTTCCTCCTTGAGCAGCACCATGGAAGCCCGGTAGTCGCAGCTCTGCTCCTGTCGTCACGCCAGATCGCAGGTGGAGTTCATGGCAGCGATGGATCCACGGCTCCGATGGTGGCGGTTGCAGGCGGAGTAGGGAACCGGTGGCGGCGAGGAATTGAGGAGGCAGCGGGGAAGGCGCGACGGTGGTGAAGCGCGAACGCGCGCGAGGGGAACCCGCAGAGGGGGAAAGCGCGGCGGTAGTGAGGCACGGATGCGGGGGGAAGGGCGCCGGTGGGATGCGTAGACACGGGGTGGGGAACGCCCAACGGCGGTGGGGAGGCACGGTCAGGGGTGGAGGCGGGGAGGAGTGCGCCCGGCGGTTTGGGGATAGGACGGGGAAGAGCGCTAATCCAATCGCTATTTTGCTGTAACCGCTGTTTACTCGAGGTATGAGAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0254700.1 | 4 | 12033522 | G | A |
| Osa04LNT0254700.1 | 4 | 12034333 | T | C |
| Osa04LNT0254700.1 | 4 | 12034553 | A | G |
| Osa04LNT0254700.1 | 4 | 12035902 | C | T |
| Osa04LNT0254700.1 | 4 | 12036177 | G | A |
| Osa04LNT0254700.1 | 4 | 12036372 | C | G |
| Osa04LNT0254700.1 | 4 | 12036789 | T | C |
| Osa04LNT0254700.1 | 4 | 12037290 | A | C |
| Osa04LNT0254700.1 | 4 | 12037734 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0254700.1 | osa-miR166a-3p | Cleavage | 5.0 | 17.49 | 1 | 21 |
| Osa04LNT0254700.1 | osa-miR166b-3p | Cleavage | 5.0 | 17.49 | 1 | 21 |
| Osa04LNT0254700.1 | osa-miR166c-3p | Cleavage | 5.0 | 17.49 | 1 | 21 |
| Osa04LNT0254700.1 | osa-miR166d-3p | Cleavage | 5.0 | 17.49 | 1 | 21 |
| Osa04LNT0254700.1 | osa-miR166e-3p | Cleavage | 4.5 | 17.49 | 1 | 21 |
| Osa04LNT0254700.1 | osa-miR166f | Cleavage | 5.0 | 17.49 | 1 | 21 |
| Osa04LNT0254700.1 | osa-miR159f | Cleavage | 5.0 | 14.995 | 1 | 21 |
| Osa04LNT0254700.1 | osa-miR166j-3p | Cleavage | 5.0 | 17.49 | 1 | 21 |
| Osa04LNT0254700.1 | osa-miR1850.2 | Translation | 5.0 | 10.012 | 1 | 21 |
| Osa04LNT0254700.1 | osa-miR1854-3p | Translation | 4.0 | 14.205 | 1 | 22 |
| Osa04LNT0254700.1 | osa-miR2118c | Cleavage | 5.0 | 16.532 | 1 | 22 |
| Osa04LNT0254700.1 | osa-miR2118q | Cleavage | 5.0 | 16.532 | 1 | 22 |
| Osa04LNT0254700.1 | osa-miR2863b | Cleavage | 3.5 | 16.295 | 1 | 21 |
| Osa04LNT0254700.1 | osa-miR5080 | Cleavage | 5.0 | 20.406 | 1 | 21 |
| Osa04LNT0254700.1 | osa-miR5145 | Cleavage | 5.0 | 15.809 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0254700.1 | 4 | qPEN-4 | Morphological trait | Panicle/flower | RG190 | RG908 |
| Osa04LNT0254700.1 | 4 | An8-glum | Morphological trait | Panicle/flower | nan | nan |
| Osa04LNT0254700.1 | 4 | nan | Morphological trait | Root | RZ69 | RG449 |
| Osa04LNT0254700.1 | 4 | nan | Morphological trait | Root | RZ69 | RG449 |
| Osa04LNT0254700.1 | 4 | qCCFJ-4 | Physiological trait | Source activity | RM261 | RM3785 |
| Osa04LNT0254700.1 | 4 | qSNP-4a | Morphological trait | Panicle/flower | RM401 | RM335 |
| Osa04LNT0254700.1 | 4 | gwt4a | Morphological trait | Seed | RG788 | RG190 |
| Osa04LNT0254700.1 | 4 | nan | Morphological trait | Panicle/flower | RG788 | RZ69 |
| Osa04LNT0254700.1 | 4 | gwt4a | Morphological trait | Seed | RG788 | RG190 |
| Osa04LNT0254700.1 | 4 | spp4-2 | Morphological trait | Panicle/flower | RG449 | CDO456 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)