© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0255200.1
GATGTGAAAAGAATCAGTGCACAACATAAAGCTTGTTATTTCTTTGCTTCCCTACCCATGGCATCAGCAACATACATATATGAATATTTATTTAGAAATACATAAAGTAAACTAACATTGTGACAAAGTAATAGTAATGACATTCCCTACTACAGAGAGAAACAAAGAAGATGGTATTATAGGTGTCAGGATAGCTAAAACCAGCACCTATAGTGCTTTTTCTGCCCACACATGCACCCTCGATAAAAATCGGCACCTATAGTATTACTATCAGTCAGAAGAGCCGACACCTATAATATATTATAGGTCCCAGTTTTTACGAACCTACACATACACTCATATTATAGGTATTAGTTTATTTAAAAATGAACACCTACTAAAAAAACCAGAAGGTGCCGACCGAACCAACCAACCTTATCTGCTCCCAGTCAGCATTATCCCCACAGTTCTCCTCCACACTGCTGCCGCACTCACCCCCTTCTCCTCCGTCCTCCACATCCTAGACACACTCCCACCCGCCCCCTACCGCGGCCTCTCCCCACCTGCCTCCACCGTGCCTCCTCCCCACCGTGGCGGCAACAGAGATGACTACTCTGCTCTCCTAGCCGACGGATCCAGGCGATGGCGATGACCCTCTCTGATCCGCCAGATCTGGCTGGAGGGGAAGTGGCAGGCTCCCCATATAGAGGCAACGGCGGCGCCCTTCCCTCTGCAATGATGTAGCAATTATGGTTTGTCCCCCATCTAACTTTTTCTCATTGTCTGTAGAATACCTGCCATTGTCAGCAATGCTAAGGACGGTACAACCGGTGGCTGGCTCGTGATCCAACTATTGCAAGGGTCAAAACTATACTGATAAAACTATCTCATACTCGGAGAAAACTACTAGTTCAGAGAACAACTGCTTCTTATGCTCGGTGCCTTTCTTCATGCAACCAACCAAATCGACCATGGAAAACTCAGTCATACTCCATCCATTGACCACTGAGAGAAACATTATCAATTATAAGGCATGGTACTGCGTCAACCTGGCTCAATGAGGCGCCAGCCCATTTTCCACGGGCTTTTCTCTTTTGCCCCTCCCCTCTATCTTCTTTGTCATGGGCCAGAAATCACCAGATAAGAGCGATATGACGCTGAAACATACAACTGGGCAGCACAAAGACCTACTTTGGAATACAACCTGCCCTTGCCAAAGCTCTTGTTTACATTTTTACTATGGGATAAGCCCCAACAACGAATGGCATCCATGGTCCTTGCAGTCTTCCAAAACACTTATATTTTTTTATTAGAACTCAGCATAGGCAGCAATAGTCAGGCCTCAGGACCAGAGCAGAAGCATTATACCGTGTCATCTGGAGCTTGGGCAACACATTGATCATGTCAAGGAACAAATCATGTCCAACGAACCATCTATTAGCAGCATTTCATCGAACACCTTTTGGACATGAGAATCAATGATCCTTTTGTCCCTAATAATCCTGAAAATAGACTTCACTGATGGGGGAGGGGATAAGATCAGCTGGCCACATCGGGCTTGAGGGCCGGATCACGTGGGTGACATCTGAGTGGCAGGAGTGCAGGAGGCAGCGCCGTGGTTGAGGTCGAATCGTGTCGTGACAGCGCGGTGATTGGACGGCGATGCGGGCGGAGTGGAGGAGGCAGCGGCGGGTATTACCGGTGGAAGATGGACAGCGACGGCGGAGACCGCGAGGAGGACCGGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0255200.1 | 4 | 13086290 | A | T |
| Osa04LNT0255200.1 | 4 | 13086379 | T | C |
| Osa04LNT0255200.1 | 4 | 13088073 | T | C |
| Osa04LNT0255200.1 | 4 | 13088135 | T | C |
| Osa04LNT0255200.1 | 4 | 13088657 | A | G |
| Osa04LNT0255200.1 | 4 | 13088708 | A | G |
| Osa04LNT0255200.1 | 4 | 13087899 | A | G |
| Osa04LNT0255200.1 | 4 | 13086842 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0255200.1 | osa-miR1319b | Cleavage | 1.5 | 17.874 | 1 | 24 |
| Osa04LNT0255200.1 | osa-miR6245 | Cleavage | 2.5 | 19.185 | 1 | 21 |
| Osa04LNT0255200.1 | osa-miR6252 | Cleavage | 4.5 | 13.109 | 1 | 23 |
| Osa04LNT0255200.1 | osa-miR390-3p | Translation | 5.0 | 12.388 | 1 | 20 |
| Osa04LNT0255200.1 | osa-miR528-3p | Cleavage | 5.0 | 20.125 | 1 | 21 |
| Osa04LNT0255200.1 | osa-miR1857-5p | Translation | 3.5 | 11.116 | 1 | 21 |
| Osa04LNT0255200.1 | osa-miR1862a | Cleavage | 3.5 | 8.399 | 1 | 24 |
| Osa04LNT0255200.1 | osa-miR1862b | Cleavage | 3.5 | 8.399 | 1 | 24 |
| Osa04LNT0255200.1 | osa-miR1862c | Cleavage | 3.5 | 8.399 | 1 | 24 |
| Osa04LNT0255200.1 | osa-miR1876 | Translation | 5.0 | 13.159 | 1 | 24 |
| Osa04LNT0255200.1 | osa-miR1319a | Cleavage | 4.0 | 14.798 | 1 | 24 |
| Osa04LNT0255200.1 | osa-miR2929 | Cleavage | 5.0 | 12.64 | 1 | 21 |
| Osa04LNT0255200.1 | osa-miR1862f | Cleavage | 4.0 | 8.399 | 1 | 20 |
| Osa04LNT0255200.1 | osa-miR1862f | Cleavage | 4.0 | 12.669 | 1 | 20 |
| Osa04LNT0255200.1 | osa-miR1862g | Cleavage | 4.0 | 8.399 | 1 | 20 |
| Osa04LNT0255200.1 | osa-miR1862g | Cleavage | 4.0 | 12.669 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0255200.1 | 4 | qCCFJ-4 | Physiological trait | Source activity | RM261 | RM3785 |
| Osa04LNT0255200.1 | 4 | qSNP-4a | Morphological trait | Panicle/flower | RM401 | RM335 |
| Osa04LNT0255200.1 | 4 | nan | Morphological trait | Panicle/flower | RG788 | RZ69 |
| Osa04LNT0255200.1 | 4 | gwt4a | Morphological trait | Seed | RG788 | RG190 |
| Osa04LNT0255200.1 | 4 | gwt4a | Morphological trait | Seed | RG788 | RG190 |
| Osa04LNT0255200.1 | 4 | spp4-2 | Morphological trait | Panicle/flower | RG449 | CDO456 |
| Osa04LNT0255200.1 | 4 | An8-glum | Morphological trait | Panicle/flower | nan | nan |
| Osa04LNT0255200.1 | 4 | qPEN-4 | Morphological trait | Panicle/flower | RG190 | RG908 |
| Osa04LNT0255200.1 | 4 | nan | Morphological trait | Root | RZ69 | RG449 |
| Osa04LNT0255200.1 | 4 | nan | Morphological trait | Root | RZ69 | RG449 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)