© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0255300.1
GAGTAATTTCCGCGCTCAACTACTCCCTTTCTCTGCAACAAGTTATAAGCTTATCATTCTTACATGGCAACAAGCCAACAGCAAAATCGCTGAGGATGAATACCAATGTCATACAAAAAATTGTGTTGGAATTGACAGCAAGTGAGACCAATCGAATGGAGAATATATCCACATCTACAAAATTGTTACTCTAAAGTGAAAGCCCTTCTGGGTTGTGTGCTTCAATGTCAACATGTTTAATCCCAGGCACAATCTTTTGGATCTCTGACTCCAGCCGATCCACTTCATACCCAAGAGCTTCGACTACATCCTCACCGTAGTTAGACATGACCCTTATTAACTCCGTATCATCCTTGGACAATGAAGCCTCCCGGAACTGTTTTGCCCATTCTCCACGTCCAGTCCTTTCCAAATAATTCTGCACCAGGACTACTCCATTGAAATCAATTTCAGCTTTGAATCTAAAGAATCCTGGTCCAATCACCTCACTTTTGCAATCATAAAGAGCATCTACAACCGGATCAGCCTTCAGAAACTCAAGAACACGCTGCATGTCATGATCATCAATAGCCCTTCCAATTAAAGCATGCCTGTTTCTCTGGATTAGAAAAATAGCAACCATTCCCAGTAAGTTGCCAACAATGATGGAGCCAATTGGATCATACATAGCATTGCCTGTGGTTTGAACAGCCACCAAAGATGCTCCAGCAATTGCAAGACCTGTAACAGCAGCACCATCTTCAGTCATGACAGCAACTGAAGTTGGATCATGACCACGCCAGATGTAGTCCCTGATACTCATTCCTTCTGCTGCTGCACCCTTCCTAACAGCCTTTATAGCAACCAGCAGTGAAGCACCTTCAATTAGGAAGGACCCACCAATCACTAATGCAGCATAGTGGATGTTCTCAGGGGGCTGTCAAATAAATGTGTCACGATATAACAACTGTAGTTAGGTAACAAAGATTTTCTAATAAGATGGAGTGCATGTGTAAAATCTTTTGGTGAATCAAATGATACATTTGCATCATACTTGCGAATTCCATAAGTTTTGAACTCCATGCACAATGGTAGCACCTGAACCCAAACAAAATATTCCAACTGCAGATATCAAGGACCATACAAATCTTTCTTTTGAATAACCATAGCTGCAGAAAGAGAAATTAAGACATGGGGCAGGCAGCATGTCAGTTTATGGCATATCACAAATAGCCTTACCACTGATTCTATTGTGAGTAGCATTTAGTGGTATACTGGCATGACAATGAATAACAGGATTCCCTGTTTATCTTCAATTCAAGACAATTTTACTCTGGTGAAAATAACTGATTTTCCATGCAGAAATGGGACTAAATTTATGGTACAGAGAAAATAACAGTAATGAAAGAAAGTGATATTTATATGTCAACAAAGCAGCATTTCCAAATTGACAATCGATACATACGGGTGTAGAGCATCTGGAGCACGTCTTGAGCTGCTCAAGCCATATGCAAGAAGAGCCTGGTTAGCGAAGTCTGCAACTGAGTGCACTAGCTCAGCTAGCATAACATGACTAGATGTTGAAAGCCATACACCAAACTTCAACGAAAAGACAAGAAAATTACACCACAGTGCTGTGTTAACCGCTCGATGGCTGTGCTCATCGTCAAAGTGCGCCTTCTTCTTCGCCTTGGCGACACGAAGAGAATAACTGCGGGAGAGGGTGAGCCGTACGGGAGGCGCGTCGGCGACGGGGCCGCGCGGCGGCGACGGGGCCGGGGGGAGGGCCCGCGCCCGCGCCCGCCACCGGCTTAGCCCTAGGACCCCCGAGGCGAGGAGCGGGCGGGGCGAGAAGGGAGGAGGGGGCGACGGGTGGTCGTGGTCGTGGTGGTCGCCGCTGCGGCGGGAGAGGAGGAGGAGGTGGTGGAGAGGGTAGGGCGAGGAGGGGAGGCGGGGGAGGGAGGAGGAGGATGAGGAGGAGGAGCTAGACGAGGAGAGGAGGCGGAGGCGGAGGGCCGCGGCGGCGGCGAATGGGCGGCGCATTTAGGGGTAGGGGTGACGGCGGCGGCGGCGAGGCTGCTGCTGCGGCGGCCGCGGGCGGGGCGCGGCTTCCATGCGAGGGAAGCGATAGAAAAAGGAAGCGGGGGGAGTTTGGGCTTGGTTGGGGCGTGGAGAGTGGAGAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0255300.1 | 4 | 13178222 | G | A |
| Osa04LNT0255300.1 | 4 | 13177181 | G | C |
| Osa04LNT0255300.1 | 4 | 13177372 | A | G |
| Osa04LNT0255300.1 | 4 | 13177679 | A | G |
| Osa04LNT0255300.1 | 4 | 13178063 | A | G |
| Osa04LNT0255300.1 | 4 | 13178089 | A | G |
| Osa04LNT0255300.1 | 4 | 13178519 | G | A |
| Osa04LNT0255300.1 | 4 | 13178561 | A | G |
| Osa04LNT0255300.1 | 4 | 13179056 | A | G |
| Osa04LNT0255300.1 | 4 | 13179522 | G | T |
| Osa04LNT0255300.1 | 4 | 13179805 | T | C |
| Osa04LNT0255300.1 | 4 | 13181557 | C | G |
| Osa04LNT0255300.1 | 4 | 13181836 | T | C |
| Osa04LNT0255300.1 | 4 | 13181886 | A | G |
| Osa04LNT0255300.1 | 4 | 13181937 | T | G |
| Osa04LNT0255300.1 | 4 | 13182282 | A | G |
| Osa04LNT0255300.1 | 4 | 13182293 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0255300.1 | osa-miR5537 | Cleavage | 5.0 | 12.93 | 1 | 22 |
| Osa04LNT0255300.1 | osa-miR156c-3p | Cleavage | 5.0 | 21.997 | 1 | 22 |
| Osa04LNT0255300.1 | osa-miR156g-3p | Cleavage | 5.0 | 21.997 | 1 | 22 |
| Osa04LNT0255300.1 | osa-miR169p | Translation | 4.5 | 12.356 | 1 | 22 |
| Osa04LNT0255300.1 | osa-miR172a | Translation | 5.0 | 17.121 | 1 | 21 |
| Osa04LNT0255300.1 | osa-miR172d-3p | Translation | 5.0 | 17.121 | 1 | 21 |
| Osa04LNT0255300.1 | osa-miR414 | Cleavage | 4.5 | 4.144 | 1 | 21 |
| Osa04LNT0255300.1 | osa-miR2093-5p | Cleavage | 5.0 | 14.985 | 1 | 20 |
| Osa04LNT0255300.1 | osa-miR2105 | Cleavage | 4.5 | 15.4 | 1 | 20 |
| Osa04LNT0255300.1 | osa-miR2878-3p | Cleavage | 3.5 | 15.183 | 1 | 24 |
| Osa04LNT0255300.1 | osa-miR2878-3p | Translation | 4.0 | 10.671 | 1 | 24 |
| Osa04LNT0255300.1 | osa-miR168b | Translation | 4.5 | 18.614 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0255300.1 | 4 | qPEN-4 | Morphological trait | Panicle/flower | RG190 | RG908 |
| Osa04LNT0255300.1 | 4 | An8-glum | Morphological trait | Panicle/flower | nan | nan |
| Osa04LNT0255300.1 | 4 | nan | Morphological trait | Root | RZ69 | RG449 |
| Osa04LNT0255300.1 | 4 | nan | Morphological trait | Root | RZ69 | RG449 |
| Osa04LNT0255300.1 | 4 | qCCFJ-4 | Physiological trait | Source activity | RM261 | RM3785 |
| Osa04LNT0255300.1 | 4 | qSNP-4a | Morphological trait | Panicle/flower | RM401 | RM335 |
| Osa04LNT0255300.1 | 4 | gwt4a | Morphological trait | Seed | RG788 | RG190 |
| Osa04LNT0255300.1 | 4 | gwt4a | Morphological trait | Seed | RG788 | RG190 |
| Osa04LNT0255300.1 | 4 | spp4-2 | Morphological trait | Panicle/flower | RG449 | CDO456 |
| Osa04LNT0255300.1 | 4 | nan | Morphological trait | Panicle/flower | RG788 | RZ69 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)