© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0255900.1
AGACCGAGACCGAGGTGGAAGCATTAATTTTTCATATACCTTAACACAATGTACTTTTACCTATATGTTACTCCATACTACATATACTGCTTTTAGAAATGTTTGTAAATGTTTCAGAACTGTGATTTCATTTCATGTTATCATCAGAATACCCGCCCTGCTTACATTTGACAAGGGTGACAGTAGAGATATGAAGAGACTCAAGTGAAGTTCAGAAAACAGTTTTCAGGCATACGCTACAACGTGTCCAATCGGAAACTGATCAACAGATTCATTTGGCGTTGCCAGCAATCTCTCCCCATGTCACGTATCTCGCCGCAATTGAAGCCCTCAATACCTTGTATGGAAGAAACCTGTATTTTGTGGGCATAGTAACAGATGCCAAACATGGCCATTTTTCTCCAGCAAAAACTTTGTACATTTGCAAGTACAGTCCACTGCCAGGCCAATGTAGAGTAGGCCTATTTTCTTCTAGACCATTTGTTGTGGTTTTCTTCAGTTAGTAGGGCAACTGGCAGGGGATTTCTCCAGCACAGATTGCTCACGTTTCCATTGGAGGTGATAACCAGGGATCTGCCTTGGACTCACCCCTTTCTGGATGGGTGGTGAGTTCCATGACTGTAGAGGCCTCCCGATCGGTTGAACAGATGCCAGAAAACCTGGAGGTGCTTCGGCTTTGCGCATTACTGTTAGAACTCTTGAGAAAAATGATGACCCACTCAATGATACTGCCTTCTCAACAGATTCCTTGTCAGTGAAAGTAACAAATGCAGCCCCTTTAGGGTGCCCAGAAATTGCATCTGTCAATATATTTATCTTAAGCACAGTGCCGCACTTCATAAAATGCCCTGACAATGCTTCCTTTGTTGCTGCAAAATGTACATTTGTCACGAGAACAGTTCTGGAGTCAGCATCCTCATCTAGATTAGCATGGGGACCTGATGATAGGAAACCTTGCTTCACATTGTTTATCTGTGCCTGCTTGGAACGAAGCTTGAGCACATCCAGTTCCACTTGTTTGAGCTTTAGTTTCACATCCAGCATTTCATTTTTCATAGGCTTGTTACAGCAATTTCCACCATCTTCATGTACAGAAGATCCTGTCTTAGATTGCGCTGGGCTGCTAACTTGCTGACTTTGCAAAACTTCAGTCTCTAAATTTCTCCGTGTAGCTAGTTGACCCAATTTGCTAGATCCTGGTACTTGTCCTTTTGTTGATTTACTCACATGGCATGCTGACTCAGAGACTGCTGTTACTGAGCTCTTCACTTCAGATATGAATTCATTCTGACTTTGTAGTGGAACACTTCTTGCTGGCAAATTTGGACTGGACTTTTGGCGAATAACATCTCTAACTTGAAGCTGATTACGCTCAATATCACCAAAATTTATCCGACCAATCAACCTGCTTCTATTGGACTTCTCTGTGTGCTCATGTGCTTGTACTGTGTTGACATCTTGATAGCTTCTGGGAAATCTTCTGGAATTTGCTATATCAAATAAATCTCCTTCTGTACTTGAGTTCATACGGCATCTTAGCTCATGCTCAGTGACCATTAACTTCGCCTTCTTATGTAGTCCATTTTGAACATGCATGTCATCATCTTCTGTAGCACAAATACGATCCTTTATGGCAGGCTTTCCTAGCCTATCCCAAACATTGCCACGTTTTTTAATAGATTCTGGATCTAGCACATCATCACTTCTTACAGCCAAAGGAAACCGTCTTGCAGAAGCATTTCTTCCAATGCACACTTCATGGCGGAGTTCATCTTGTGGCAATGCTTGTGCTGTCCTTACAGCTACACCAGACTTCAGTGTGGAGAAATTTCTGCCACTTGATGATCTCTGATCTTTCTTCTGATGTTGGCCCTCCCAATAACATTGATCGTCAACCAACTTTTCAGGAGTAACAGTAACCGTCGAGCTAATGTGGCGTCGGGCCACATTTTGTCCTTCAGTTGAGTCATGCTTCTGAAGAGTATGATGCTCTTGAGGTGATGAGATATCTGAATTGACCAGCCGGTAACCATTATTTGTATTTGAAATGATTTCCGGTAAATTCTGGTAACTGGCAGCAACCGATCCGGCCCAGGAAACCTTGATGGACACTGATGATCATAAGACAATGCGATAAGATTCTTACAATGAAAGTATCCTCGGATAGCGCATTTGCAACCTGAAGATTTTTCTTGGTACTACGGTTCCGGATCTCATTTGTCAGACCATGCTGGATGCTAGAATTGTCAGCCAATGTTAAAGCCTTTTTACTGAGGTAACCCCAAAGCCATGAAACAAATTTTGCACTATCATCACCAAGGAAGGCCTCCAAGTCATCACGTGCTTGGTACTGGTGTTTCCCATTACAGACTAGAATGACAATGTATTCCGCGAGGATGTCGTCGGTGTAGCTGCCGAGGAAGCGGGGGAGCACGTCGGCGACGGCGGCGCGGAGGGCGTCGGCGTCCGGCGAGAGGCGGTCCATGCGGAAGGAGCGCTCCCCGGCGGCGAAGAGGCGCAGGCTCCGGCGCAGCAGCTGCTCCTCCGCCTCCGCCGCCGCCTCCCGCCCCATCGCCTCCGAATCTCCTGGTCGCGGGCGGCGGCGGCGGCGATAGGCGGCGCCTCTGCTGCTCAACGAGGGAGAGAGAGACGTGGCAGGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0255900.1 | 4 | 13825624 | T | C |
| Osa04LNT0255900.1 | 4 | 13821909 | A | T |
| Osa04LNT0255900.1 | 4 | 13822025 | C | T |
| Osa04LNT0255900.1 | 4 | 13822364 | A | G |
| Osa04LNT0255900.1 | 4 | 13822610 | A | G |
| Osa04LNT0255900.1 | 4 | 13824073 | G | A |
| Osa04LNT0255900.1 | 4 | 13824754 | A | G |
| Osa04LNT0255900.1 | 4 | 13824903 | A | G |
| Osa04LNT0255900.1 | 4 | 13826576 | C | T |
| Osa04LNT0255900.1 | 4 | 13827530 | A | G |
| Osa04LNT0255900.1 | 4 | 13827686 | C | T |
| Osa04LNT0255900.1 | 4 | 13827938 | A | G |
| Osa04LNT0255900.1 | 4 | 13828399 | G | A |
| Osa04LNT0255900.1 | 4 | 13828476 | A | C |
| Osa04LNT0255900.1 | 4 | 13829202 | T | C |
| Osa04LNT0255900.1 | 4 | 13829280 | G | A |
| Osa04LNT0255900.1 | 4 | 13829844 | C | G |
| Osa04LNT0255900.1 | 4 | 13825684 | T | C |
| Osa04LNT0255900.1 | 4 | 13822577 | A | G |
| Osa04LNT0255900.1 | 4 | 13824742 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0255900.1 | osa-miR5802 | Cleavage | 3.5 | 16.531 | 1 | 24 |
| Osa04LNT0255900.1 | osa-miR5823 | Cleavage | 4.0 | 19.57 | 1 | 24 |
| Osa04LNT0255900.1 | osa-miR5837.2 | Translation | 5.0 | 10.247 | 1 | 21 |
| Osa04LNT0255900.1 | osa-miR6249a | Cleavage | 5.0 | 17.708 | 1 | 21 |
| Osa04LNT0255900.1 | osa-miR6249b | Cleavage | 5.0 | 17.708 | 1 | 21 |
| Osa04LNT0255900.1 | osa-miR166j-5p | Translation | 5.0 | 19.438 | 1 | 21 |
| Osa04LNT0255900.1 | osa-miR1428a-5p | Cleavage | 4.5 | 15.516 | 1 | 21 |
| Osa04LNT0255900.1 | osa-miR1854-5p | Cleavage | 4.0 | 16.429 | 1 | 21 |
| Osa04LNT0255900.1 | osa-miR1880 | Cleavage | 4.5 | 23.48 | 1 | 24 |
| Osa04LNT0255900.1 | osa-miR2874 | Cleavage | 5.0 | 16.853 | 1 | 24 |
| Osa04LNT0255900.1 | osa-miR3979-5p | Cleavage | 4.5 | 24.053 | 1 | 20 |
| Osa04LNT0255900.1 | osa-miR5340 | Cleavage | 4.5 | 16.238 | 1 | 23 |
| Osa04LNT0255900.1 | osa-miR5340 | Translation | 5.0 | 16.712 | 1 | 23 |
| Osa04LNT0255900.1 | osa-miR5503 | Cleavage | 5.0 | 13.285 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0255900.1 | 4 | An8-glum | Morphological trait | Panicle/flower | nan | nan |
| Osa04LNT0255900.1 | 4 | nan | Morphological trait | Root | RZ69 | RG449 |
| Osa04LNT0255900.1 | 4 | nan | Morphological trait | Root | RZ69 | RG449 |
| Osa04LNT0255900.1 | 4 | qCCFJ-4 | Physiological trait | Source activity | RM261 | RM3785 |
| Osa04LNT0255900.1 | 4 | gwt4a | Morphological trait | Seed | RG788 | RG190 |
| Osa04LNT0255900.1 | 4 | gwt4a | Morphological trait | Seed | RG788 | RG190 |
| Osa04LNT0255900.1 | 4 | spp4-2 | Morphological trait | Panicle/flower | RG449 | CDO456 |
| Osa04LNT0255900.1 | 4 | nan | Morphological trait | Panicle/flower | RG788 | RZ69 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)