© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0257200.1
AAATTATTTTTTTCCTTAATATGCTGTACGGCATATTATCAGAGTATATTCAAAAGATGGGGGCCTGATATCATTCCTAGAACCTCCCAAAAGCACATTCAGCCATAGTATTTTCTCACCAGTCACCACATCATTACATTACATTACACTACACACTCGGGTACATTGTGTAGCGTACAATGTTTCCTTTTCAGTTCTCTCGAGTGGTCAGAGAACACCATCTAAACACCCCTACCCTTTTTCCCTCTTTGGTGAAAAGAATTTAAATCAAATGAATTTCCACTAGAGTCCGTGTCATACACCGGAGTTAGAATATTAGATAGCTGTACACCATTGTTACCAGCAACACAGCCAAATGCTTCTGCCAATGAAACCTCCATCCTGAGGAGATGTTGTGAGCGTCAACAGTGTATGTTGCCCCTGTCTGTTCATCCTTAATTTTAATGCTAGAGGAACAGTTGTACTCAGTCCAGCCAATGACTTGATTTTCCAGGTCATAGACAACTAACTTATTTGAAAGGACCAGATCTCCCAAAAGCACCATACCCTTCCCATCCTTTGATTGTAATCCACCATTTTGGAATCCAACACAATATAAGTTATCCCCATTTTCGAAGAAGTAATCGTGTGGATACACATTCAAAGGAAGATCATTCTCAAAATGGAAAGTGATCTTTGGAAAGTCATCATCCACTCTCCCAACATACTGGAAACACAGGAATTCTTGAACATTATGGAAGGTTATATCCTTATGCTTGGCAAATACCGCAAGCATTATTTCCTTGTAAACTATCTCCGGAAGGTATGTTAAGGTCGTACCACTATCAATTATGGTACCCTTCTTTTCGCCTGTATCAAACATATGTGACGGAAGCTTTAGTGCAGTACCACCAACATCAATTGACTTGAGGTTTACATTGTAGTGTGGCATATTGGGCACCAATGGTGTTGTTTTGACTTTTGGTTGCACCACATTTCCAATAGCGAAAATTCCACCGCCGTTTATAGTATCCAAACAATGAGCAAATATCTTCTTCACCTTCCCTGCAGCAGATAACTGTGATAGCATTGACGTATTTGATTGACCGAACCCTATAATTCCATCAAGGGCTTGGTTTGAACTGCCTAAATCCCCACCTTGCTGAGAACCACACCCAAATGTGACGGTGGAGTTGGCGGGTCGTGTCTGCCCATCCCCGGACACCTGATCAAACTGCAGGAGGTCGGACACGAAGTACCCTGTGGTGGAGCTACCGTCACCATACGTGACGCTGTACTCACAGGGCAAGCTGGTGGTGCACCCGGGCAGCAAGCCCCCGTAGGTGGCGGCGCAGAACCCCTGATCGCACGAAACCTTGCTCCCAGTAGACGAGTCCTTGGGGTCATACAGCGTCAGCTCTAGCCCGAGGCCGCTCTTGCGTGGGCATCGATCGCAGGAGATGCAGTTCACCCAGAGGATGTCGCTGCCGGTGTCCACCTGCACGTAGTACCGCTTGGTCGGCGTCCCGATCCCGATCTCCGTGTAGTACAGCCCGGTGTCGGTGGGGAGGCCGAGGCCGCCGAGGGGGATGTCGGCGGCAGCGAGGAGCCTCCCCCTGCGGCTCCCGTCGTGCGCTCGGTACGCCTCCGCCGCCGCCCCCGCACCACCGGCGGGGAGGCTGCGGCGCACGTGGAACACCCCTGTTGCTTCCGCCCCCGCTCCCTCCACCGCCGCCAGCATTACCGCCGCCGCGACGACGACGACGACGAGGAGCAGCGCCACCGCTGGCGCTGGCGCGGGCGGGCGGTCCATCGTGGGAGTGCGGCGGCGGGCGGCGGCGGCGGCGAGAATCGCTGCTGCCTTATGCCACCGGCCCTTCCCTCCTCCTCCTCCGGCTCCGCCTCCGCCTCCGCGGGTGAGCTTGAGGTTAATTGGGGGAGCGGAAAAGGTGGGGGAAGGGAGGGAGGGAGGGAAGAAGGGGGGGAAAGGGAGCGGGTGGCGGTGGGGTGGCCTCCTCCGCCCGGGGATGCGGGGGGAGGGAGACGGAGACGGAGACGGGCCGACGACGCGAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0257200.1 | 4 | 15846613 | G | A |
| Osa04LNT0257200.1 | 4 | 15845972 | G | A |
| Osa04LNT0257200.1 | 4 | 15846017 | G | A |
| Osa04LNT0257200.1 | 4 | 15846103 | T | C |
| Osa04LNT0257200.1 | 4 | 15846148 | C | T |
| Osa04LNT0257200.1 | 4 | 15846152 | A | G |
| Osa04LNT0257200.1 | 4 | 15846970 | C | T |
| Osa04LNT0257200.1 | 4 | 15847778 | T | C |
| Osa04LNT0257200.1 | 4 | 15847867 | T | C |
| Osa04LNT0257200.1 | 4 | 15847976 | A | G |
| Osa04LNT0257200.1 | 4 | 15848298 | G | A |
| Osa04LNT0257200.1 | 4 | 15848937 | A | G |
| Osa04LNT0257200.1 | 4 | 15849116 | G | A |
| Osa04LNT0257200.1 | 4 | 15849306 | A | G |
| Osa04LNT0257200.1 | 4 | 15849388 | A | T |
| Osa04LNT0257200.1 | 4 | 15849747 | T | C |
| Osa04LNT0257200.1 | 4 | 15849765 | A | C |
| Osa04LNT0257200.1 | 4 | 15850255 | C | G |
| Osa04LNT0257200.1 | 4 | 15850778 | T | G |
| Osa04LNT0257200.1 | 4 | 15851287 | A | C |
| Osa04LNT0257200.1 | 4 | 15851572 | C | T |
| Osa04LNT0257200.1 | 4 | 15852076 | C | G |
| Osa04LNT0257200.1 | 4 | 15852155 | T | C |
| Osa04LNT0257200.1 | 4 | 15852491 | T | C |
| Osa04LNT0257200.1 | 4 | 15852557 | C | A |
| Osa04LNT0257200.1 | 4 | 15852364 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0257200.1 | osa-miR418 | Cleavage | 3.5 | 3.733 | 1 | 21 |
| Osa04LNT0257200.1 | osa-miR426 | Translation | 5.0 | 24.103 | 1 | 21 |
| Osa04LNT0257200.1 | osa-miR2055 | Cleavage | 3.5 | 18.02 | 1 | 21 |
| Osa04LNT0257200.1 | osa-miR2122 | Translation | 5.0 | 16.873 | 1 | 22 |
| Osa04LNT0257200.1 | osa-miR5147 | Translation | 4.0 | 18.459 | 1 | 21 |
| Osa04LNT0257200.1 | osa-miR5075 | Translation | 4.5 | 24.707 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0257200.1 | 4 | qCCFJ-4 | Physiological trait | Source activity | RM261 | RM3785 |
| Osa04LNT0257200.1 | 4 | gwt4a | Morphological trait | Seed | RG788 | RG190 |
| Osa04LNT0257200.1 | 4 | An8-glum | Morphological trait | Panicle/flower | nan | nan |
| Osa04LNT0257200.1 | 4 | spp4-2 | Morphological trait | Panicle/flower | RG449 | CDO456 |
| Osa04LNT0257200.1 | 4 | nan | Morphological trait | Panicle/flower | RG788 | RZ69 |
| Osa04LNT0257200.1 | 4 | gwt4a | Morphological trait | Seed | RG788 | RG190 |
| Osa04LNT0257200.1 | 4 | nan | Morphological trait | Root | RZ69 | RG449 |
| Osa04LNT0257200.1 | 4 | nan | Morphological trait | Root | RZ69 | RG449 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)