© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0257300.1
GGCAATGCACTTCGGACGGTGCCATCTTTATTTACTAATTACCAACGTACACATAGAGTATACGCATAAGAATTGCTACCTGCATCACAAAATAAATTTCATTCTATACATGAGTCTGGATATAGACCATGTCCAGATTTATGTACAAAAGTGAACTTATTTTAAGATGGAGATAGAATTACATAAGCATTGTGTAAGCACATAGTTTGCTGCATTGTTGATAGCTCAGTTCTAAAGGGTGACAGGATTCACAAACAGATTCCCAACATTTCCCTGATGATACTTCGAAAATGTATATGCATCTTTCTTCTTATCGTAAAAGAATGGCACTGCTACGGCCAAATTCATAACTCGTTGCACCACATGGAACTGCTTTTGATGATCACAACGAACCTGATTCAGGGTTCTCCATTCACTTTCAATCATTGATTCGATCTTGTCTAAGGCAACTTCGCTTGTAACCTTGTGCTCATTGATATAGCACTCTACTGTGTTTGCGGCATCTCCTTTGTTCTTTCTTCCAGACTTGAATGCAGCAATGTCGTTCATGAAACGCATAATCTTTGCACAAGCTATAACGGCACTTGAACGTACTGTTGTCAATTCAAATGATTCCTTCGTTACTGCATCACCCTGGCCAACTGCAGCAGTCACACAGAGTAGTGGAACAGTACTGGACAGGGTTGACAAAGCAACCCGCTCCTTAAATGCTGGCTTGTAATTTTGATGCAACCATTCAAATTCTTGCAGGTAATACGTGGATAGATTTTGGAACTCTTTTTTCATGCAGGTCACCCGGTATTTGTCACTGGCCTCTACTTGAGCTTCAGTCTCCCTGAAGTAATTCAGCAGTGCACGGTAGAACTTTTTCATGTACTCTGGTAGTAATGAGATAGCACTTTCATCCCATCTTTGTATGGCTTCATTCAGCTTCCTGCATTCCTCGATGGTGGCATGATCATCATATGTGTCATCCATAAGGACAATGAATACAATTATCTTGGCAAGGATCATCCGTGTGAGTGTTAAGTTTTCTTCATAGAACAGCGCATAGGACCAAAGATATGACTCCACTGCACGATCTCTAACATGACTTAGCTCGACATATCCATAAAGATCTTTCCACCACTGAGAAAAAGCTTTGAGCTCCTTCAAGTGGACATGCTGCAGAAGGTTAAATTCCAGCTTTGCAAGATCTAAAAGAACAACAATACATTCTTCCTCCTGTCCGTACTCCAGCATGTAATGCAACATTTCAACTCTCTTGTAGGTTCTCGGTAATGGTAAGTGTAGGGCACGGTTGATTTGATTATCTAGAGGGGCCTTGAGCCTACTTCCGTCCCTCATTGATTCGAGGTGGTGCCTTGCAAAAGACATAGCTTCTTCAAGTTCTGGCTCATCATGGACAAGGAGGTGAGCTGCATTGTACAAACTTAATAATGCCCTTGGTTCATCAGCTATTGTATTGATGAACCTCCCATCCTCTCCTTTGAATTTTTCGAATACATCTGCAAGGCAGCTAAATTAAATGTGGATTTTTCCTTCCAAAAGACACTAGATTCCCTTTTCATACAATTTTTTAATACATCGGATATTCTTGACTAATTTTTATGTATATATTCTAATCTGGACTTGTATTGAAAAGTTGTTTGACACAACCATAATTACGAAAATGAATGAATACCTACAATACAATGACTTAAAATTTGTGATCTAGAGAAAAATACAAAAATTTGTATATGTAAGTCATCACCAATATAAGAAATACTGGCACTATTGAAAATTGGGCCTATCTGTCATATGCACATAGTGGATAAATTGTTACTCCCTCCTTTTCATATTATAAGTCGTTTGACTTTTTTGCTAGTCAAACTTCTTTAAGATTGACCAGATTTATAGAAACGAAGGGTGTATTTTGTAATAGACTTGTTTGGCATTGTTGTTGTTTGTAAAATACATAGTAAATGTTGCAGTGAGATAGTTTTGACCAAGTTGCAATTTTGTGAAAATCACTCTGCAAGTTATCTCTTTCAGTATTTATTAGTACCTGGAGATACCCAAATGCCATGCTCCCTAAGTAAGCGAAAGTGGAGAGCAACCTCGTGGAGACTAGAGCTAGTGAATTCACTTTCTTTGATGTCACTTATTGCATTGTTTATCTCATCTTGGAAAAGGTGATCTATTCCAAGACGTTGAACTGCATCTACTAAGTGCATTTTCTTGGCTGTATCATTGTGCGTCTCAAACAGTATACGGACGTCCTGTTTTAGTTTATCAGCCTTTTCCATCATCCAATCCTCCGATCTCTGTTTATTTGCATGCATAAATTTGATTTGTTAGTATCGGATGAAAGAAATACAGGAATGAATAATTAGGTGAAATAAAACATTCCTTTTAGATAACTTGTTGGTGTGTTGTGGATTTGACCAAATTTTTTCTTGCCAAAAGCTGCATTAAATCAAATGTAATAAAAAAATATGATAAAACTCCATTGATCCACTAGGAAAATGTGAACTACGTCGCCCCTCCATCCTTTTAATTTCCAAATATGTGCCGTTCTACAATGAGTGCTTGCAAACATTTTTAAAGTACGTAAATAGATATAGAAGTATTAATTATATAATTTGTCATGTGAATATTGCCGTTGATTTTACAGCTAAAATATGCCATTCTTACTATAAAAGTCAAGTCTTAGTTGAAGTTGTGTTGGGAAAATCTGCACGTCAGAATACCAAATGAGAAACATTGGAGGGAGTAATTGCCCACGCTATAAAGAACTATTTTCGTGAACAACCCGTATATTTTTATAGGCGGCCTAAGTAAGTACCTACCTGTGAAAATGCGTAGGCTCTCTGGTCAAGGCTCTACGATGAGAGTCAATTTTCATAGGCAAGCATGCTAGCTAGGAGGCACATAGAAAAATAGGATCATTCTTTTAGGTGCCCATCTTAAAGGCCGAGAAAATCGTATTTTTTAATAGAAAATACCCAGAGCTGTCTATAAAAACAATTGACAGGTCGGCCTCATAATAGCACCACGTGTGAAAAAGGCGAAACCTAAATAATATGCCCATCAATCTGCCCGACCTCTAGTGACTCTTTATCTCACATCATCTCGTCCTTATTCCTTAATTATGTCATCTCATATCGATTGCCACGATGCTTGTATTGGATCAAGATAGGGTTTCTACAATATGAAAATAAAAAAGGTATACCTGTAGTGGCTTTGGGTCATAGTTGATAAAGAAATCCCCCCATACAGAGGGCTCAAAGCTAGATACTTCCTTTACAGGAGTGATTGATTCTGAGGACACAACATGTGCAGCATGTCGATGCGCACTGCTTTGTCGTCGGAAGGAGACTTTTGCCGGGGCACCAGCAGAAAGAAGCCCAACCGATGGCTGGATTGGACGATGGCCTATCCTAGCATGCACAACACCATGAGAGAAGAAGAAAGGGAGAGGGATGGAAGTTGACATACTAGTATATTTCCCTTGGGAGGGCAATAGCAGTTCACTGATACTATTGTAGTGTGGTAGTCTGAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0257300.1 | 4 | 16058773 | A | G |
| Osa04LNT0257300.1 | 4 | 16058443 | C | G |
| Osa04LNT0257300.1 | 4 | 16060497 | C | G |
| Osa04LNT0257300.1 | 4 | 16060677 | C | T |
| Osa04LNT0257300.1 | 4 | 16062751 | T | C |
| Osa04LNT0257300.1 | 4 | 16063659 | A | G |
| Osa04LNT0257300.1 | 4 | 16063973 | T | C |
| Osa04LNT0257300.1 | 4 | 16063989 | G | A |
| Osa04LNT0257300.1 | 4 | 16064819 | G | C |
| Osa04LNT0257300.1 | 4 | 16064851 | C | A |
| Osa04LNT0257300.1 | 4 | 16065981 | T | G |
| Osa04LNT0257300.1 | 4 | 16066048 | G | C |
| Osa04LNT0257300.1 | 4 | 16066512 | G | A |
| Osa04LNT0257300.1 | 4 | 16066812 | G | A |
| Osa04LNT0257300.1 | 4 | 16066987 | C | T |
| Osa04LNT0257300.1 | 4 | 16068022 | A | G |
| Osa04LNT0257300.1 | 4 | 16062664 | G | A |
| Osa04LNT0257300.1 | 4 | 16060040 | G | C |
| Osa04LNT0257300.1 | 4 | 16062659 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0257300.1 | osa-miR5543 | Cleavage | 4.0 | 11.455 | 1 | 21 |
| Osa04LNT0257300.1 | osa-miR5794 | Cleavage | 4.5 | 9.79 | 1 | 21 |
| Osa04LNT0257300.1 | osa-miR5806 | Translation | 4.0 | 14.036 | 1 | 21 |
| Osa04LNT0257300.1 | osa-miR5816 | Cleavage | 4.0 | 11.575 | 1 | 24 |
| Osa04LNT0257300.1 | osa-miR5823 | Translation | 3.5 | 15.186 | 1 | 24 |
| Osa04LNT0257300.1 | osa-miR5831 | Cleavage | 5.0 | 20.468 | 1 | 24 |
| Osa04LNT0257300.1 | osa-miR6247 | Translation | 5.0 | 19.543 | 1 | 21 |
| Osa04LNT0257300.1 | osa-miR6252 | Cleavage | 4.0 | 13.74 | 1 | 23 |
| Osa04LNT0257300.1 | osa-miR6253 | Cleavage | 4.5 | 17.877 | 1 | 22 |
| Osa04LNT0257300.1 | osa-miR437 | Cleavage | 3.5 | 17.577 | 1 | 21 |
| Osa04LNT0257300.1 | osa-miR1436 | Cleavage | 5.0 | 17.151 | 1 | 21 |
| Osa04LNT0257300.1 | osa-miR2101-5p | Translation | 3.0 | 6.158 | 1 | 22 |
| Osa04LNT0257300.1 | osa-miR2868 | Cleavage | 4.5 | 13.023 | 1 | 20 |
| Osa04LNT0257300.1 | osa-miR2868 | Translation | 5.0 | 9.822 | 1 | 20 |
| Osa04LNT0257300.1 | osa-miR2874 | Cleavage | 5.0 | 13.78 | 1 | 24 |
| Osa04LNT0257300.1 | osa-miR5157a-3p | Cleavage | 3.5 | 17.565 | 1 | 24 |
| Osa04LNT0257300.1 | osa-miR5157b-3p | Cleavage | 3.5 | 17.565 | 1 | 24 |
| Osa04LNT0257300.1 | osa-miR5487 | Translation | 5.0 | 10.107 | 1 | 21 |
| Osa04LNT0257300.1 | osa-miR5487 | Translation | 4.5 | 12.848 | 1 | 21 |
| Osa04LNT0257300.1 | osa-miR2905 | Cleavage | 5.0 | 15.656 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0257300.1 | 4 | An8-glum | Morphological trait | Panicle/flower | nan | nan |
| Osa04LNT0257300.1 | 4 | nan | Morphological trait | Root | RZ69 | RG449 |
| Osa04LNT0257300.1 | 4 | nan | Morphological trait | Root | RZ69 | RG449 |
| Osa04LNT0257300.1 | 4 | qCCFJ-4 | Physiological trait | Source activity | RM261 | RM3785 |
| Osa04LNT0257300.1 | 4 | gwt4a | Morphological trait | Seed | RG788 | RG190 |
| Osa04LNT0257300.1 | 4 | gwt4a | Morphological trait | Seed | RG788 | RG190 |
| Osa04LNT0257300.1 | 4 | spp4-2 | Morphological trait | Panicle/flower | RG449 | CDO456 |
| Osa04LNT0257300.1 | 4 | nan | Morphological trait | Panicle/flower | RG788 | RZ69 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)