© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0257700.1
GGAGCGCAACCATTGCTGCTTTTCTGTTTACTTCCTTAAAAAAAGCAACTCAAAAACTGGAAATACAACCACCAGGACCGATTCTGCCGCCGTGATCTAGCTGCGTCCATCCCCACAGCCACACGACGTGTCTTTGAATTCGGCGCACGACGCGGACAGCGAGCTAGCCTCGGATGCCCTCACAACTGACTCCTCGCGATGGCTATCCACATAGATCGTGGGCTCACGCATACAGACTCAAAATGAAACACATGCAGATTAAGTAGCTTAGCACACAAGTTTATTGTTAACATGAATAACAGAAGCCAAAAGCATATTCAATACAAGTATACATGCAGATGGATTGCCACATTGGCTAGAAAGTTAACCATTAAGGTCTAGATGGGAGCAGGCCTCACGAAGAGAGACTCTATAATCTCCCTAAGAAGTGTGGCAAATGTGTAGGCATCATTCCTGTCATCGTAGAAGAGTACCATAGAAACGGTGAAGTTCACAACTCGCTGCACCATGGGCAGCAGTGTACCATGCTCAAGGCGGGTCTGGTTCGTGGTTCTCCATTCATCTTCGACCAGTGAATCAATCTTTGCAAAGGCGACCTCGCTTGTGACCCTATTCTCATTCATGTAACACTCTACGGAGCTCGCAACATCTCCCTTGTTCTTTCCACACTTAAATGCAGCAATATCATTCATAAAACGTCCAATCTTTGCGCATGCTATGACTGCATCATTACCACTAGCTGCCCACTCGAATGCTTCTGTCGTCACTGCATTACCCCAGCCAATCATAGCAGCCACACACACTAATTGCACGGCCGAGGATTTGGTGGACAAAACCACCTGATCTTTAAAGCTTGGCTTGTGTTTCTGGTAGGACCATTCAGCTTCTTGTAGGTAATAAGTAGACTGCCTTTGAAACTCTTGTTTGGTGTAAGTAACCTTGTATTTTTCGTTGTCGGACACTTGGTGCTCAAACTCCTCAAAGTTGATTAGCAATTTAATATAGAACTTTTTCAGGTACTCCGGCAAAATAGAAATAGCGCTTTTGTCCCATCTTTGTATGGCTGTGTTTAGCTGCCGGCATTCCTCAACGGTGGCATGAGCATCATACGTATCATCCATCACAGTATCCAGTGCAATTATTTTGGCAACAAACATTCTGGTGAATGCAAAGTCTTCTTCGTAGAACATCATGTAGGACCAAGCGTATGCCTCTATCGTACGATCCCTAATGTAACGTAGCTCCATATATCCATAAAGATCTTTCCACCATTCAGAAATTGCTTTGAGTTCCTCCAAGTGGATATGTTGCAGGAGGTTAAAATCTAGCTTCGCAAGTTCAAGAAGAAGTGGAATATTTCCCACCTCTCGTTCGTACTCCGACATGTAGCAAATAGTCTCAACTCTCTTGAAAGTCCTTGGCAGTGGTAGGCTAAGTGCACGCTTGACTTGCTCAGCTAATGGAGGGTTGAGAACACTGTCTTGACTCATCAATTCAAGGTGTTTTCGTGCAAATGAGATTGCTTCTTCAAGTTCTGGCTCGCCATGAATGAGGAGGTGTGCAGCGTTGTATAAACTTAGTAGCCCCTTTGGGTCATTCGCTATATCATTTCGAAACTTGCCATCATCTCCCTTAAATTTATTGAATGCATCTGGAGACACCCAAAACCCATGTTCCCTAAGCAAGCGAAACCGAAGAGCAATCTCATAGAGACTAGAGCTTCTGAATTCACTGCCATGGATGCTTGTTAGAGCATCTTCTATCTCCTCTTGGAAGAGGTGATCAATTCCGAGATGTTGGACGGAATCCACTAAGTTCATCCTCGCCGACATGTCGTGGCAGGTCCCAAATAGTGTCTGGATTTGCCCTCTCAGCTTCTCAGCCCTCTCCTGCATCCACCTCTCTGATCTATAGGAATGAGTAGTGGTGATGCCTGCAATGGTTGTGGTTCGTAGTTGATAAAGAAGTCGCCCCATATCGAGGGCTCAAAACTGAGTGCCTCCTCATGGGTAGGAGTATCACTCGAGGCCATAATATGGTATGTGTTTATGTATTTATGCAGGTACAGTAAGTACTAGTAAATCTCAGCGATTGCCGATTGGCTTG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0257700.1 | 4 | 16350417 | T | A |
| Osa04LNT0257700.1 | 4 | 16350501 | G | A |
| Osa04LNT0257700.1 | 4 | 16350775 | C | G |
| Osa04LNT0257700.1 | 4 | 16351050 | T | C |
| Osa04LNT0257700.1 | 4 | 16351180 | A | T |
| Osa04LNT0257700.1 | 4 | 16351193 | A | C |
| Osa04LNT0257700.1 | 4 | 16351356 | C | T |
| Osa04LNT0257700.1 | 4 | 16351400 | T | C |
| Osa04LNT0257700.1 | 4 | 16351408 | A | T |
| Osa04LNT0257700.1 | 4 | 16352743 | A | G |
| Osa04LNT0257700.1 | 4 | 16352949 | T | C |
| Osa04LNT0257700.1 | 4 | 16353427 | T | A |
| Osa04LNT0257700.1 | 4 | 16353465 | C | T |
| Osa04LNT0257700.1 | 4 | 16353734 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0257700.1 | osa-miR812r | Translation | 5.0 | 13.933 | 1 | 24 |
| Osa04LNT0257700.1 | osa-miR6253 | Translation | 4.5 | 22.594 | 1 | 22 |
| Osa04LNT0257700.1 | osa-miR7695-3p | Translation | 4.0 | 17.629 | 1 | 21 |
| Osa04LNT0257700.1 | osa-miR160c-3p | Translation | 4.0 | 21.069 | 1 | 21 |
| Osa04LNT0257700.1 | osa-miR396a-5p | Translation | 4.5 | 15.406 | 1 | 21 |
| Osa04LNT0257700.1 | osa-miR396b-5p | Translation | 4.5 | 15.406 | 1 | 21 |
| Osa04LNT0257700.1 | osa-miR396c-5p | Translation | 4.5 | 15.406 | 1 | 21 |
| Osa04LNT0257700.1 | osa-miR2275a | Translation | 5.0 | 19.539 | 1 | 22 |
| Osa04LNT0257700.1 | osa-miR2275a | Cleavage | 4.5 | 23.317 | 1 | 22 |
| Osa04LNT0257700.1 | osa-miR2275b | Translation | 5.0 | 19.539 | 1 | 22 |
| Osa04LNT0257700.1 | osa-miR2275b | Cleavage | 4.5 | 23.317 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0257700.1 | 4 | gwt4a | Morphological trait | Seed | RG788 | RG190 |
| Osa04LNT0257700.1 | 4 | gwt4a | Morphological trait | Seed | RG788 | RG190 |
| Osa04LNT0257700.1 | 4 | spp4-2 | Morphological trait | Panicle/flower | RG449 | CDO456 |
| Osa04LNT0257700.1 | 4 | nan | Morphological trait | Panicle/flower | RG788 | RZ69 |
| Osa04LNT0257700.1 | 4 | An8-glum | Morphological trait | Panicle/flower | nan | nan |
| Osa04LNT0257700.1 | 4 | nan | Morphological trait | Root | RZ69 | RG449 |
| Osa04LNT0257700.1 | 4 | nan | Morphological trait | Root | RZ69 | RG449 |
| Osa04LNT0257700.1 | 4 | qCCFJ-4 | Physiological trait | Source activity | RM261 | RM3785 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)