© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0257900.1
AGTAAGAAGCAACTAGTTGATAACCAACTTATAAGAATCTAGACATGCTGAGTTTCTCAGCTTCTGGTTTCTAGTTCATCTTGTAGATTTTAGAACTAAAATTTCTCATAATCTAAACGAAAAGTTGGACTGTCAAAAGTTCCTCCAGACATACCCTTAGCAACCCCTCACAAAGCATACGCTGCGCATGCTATCCAAACGGATTGTACAGATCTCATGGCCATACGTGGAGTGGTAAATATACGAAGGTTTACAAATTTGGATGGTATTTAAGTGCACCGGAAACTTTTGGTGGTACCTTTCTACAACAGGCATCTTGCGACGTGCAGTAATGAGGTCAAAGTCAAACTGAGGCTTCAGGAGATGAGCAGTAATGATTACGAATGTCATGTGATGTCCAAACAGTCCAACCTGTGCTCCTGCTTACATAACATCAACTCCACGCGCATACATTCGAATGACAATACAAATCACACTAATCCAGCTAAACTATTTCTAAGAGTTTGCAGCTTTACTGCCCAGCACTGTTGCCTGCACAAAGAGAGAACATGTTAAGGATGCCAATAGATCAGATAACAGTTTTGTCATTAAATGATGTATTTGAAGTAAGAAGGAAAAACTGGATGCATATTGAAAAAGCAAGTGACCAATAACTAGCAGGAACCCATCATAGACAGCAAGCAATTCTGGTCATTCTACAACCTTTTAATACTCTGAAAACACATGTAACGATAGTAAAAAGAAACTACATTTGTTTCCTTAAATAATCAATATTTATAAAACGATCATGTATTTTGCAATTTGAATGAAACACAAGTGTCAACTGCTCATTCTTAGTTCTAGAGAAATAGCAGATAAAAGCTCCATAAAGACAGTTCCAACCAAAATGCAAAAGTCACACTGAATGTTAGACCAATAGGCGATGCCAATCTAGCACGGCATTGTTTTTCTCATAAATGAAGGCAAATAAAGTTATAGTGCCATAAGTTTTGATTGTAAATATGAAGTTCAAGAAACCCAGGACTGCTAGTGTATTTTACCCTATATTTGTACTGTGATATATAACAGATTAGAATGGATGGTAAGTAGTTCGAGAATTCAAAATTCATGCAAAGATAACTCTCAAAGATTAATTTTGATCATTTTTAATAATTCATGCAGAGAACACATGGAAGTAATAGCCAGGTGGAAGCTGTTGCAAATCAAAACCTTCAATTTGATTATTTCTATGCTGATTATTTTTTTCTCGAAAATGCAGGACGACTGCATTTCATTTCATTAAGAAGAAAGCGAATAAATGTCCAAAGAAAGGGTCAAGGAAACAACCCCGATACAACCCAAGAATGCATCCTACACAAGCGATGCTCGACCAATACGCTGATTAATTGACTGCTGTCACTAGCTTCATCTTGACAGATACAAAAATAAAAGAGAAGTATCAGTTCTTATGTTCAGGTACCCGATTGGTGCAAGATCCCCATTTCAAAAAACCTATACAGTATATGCATCATTAAAAATGTCAAGCAACAAAAAGTAAATTTGCCTCTAGTGGCACAAAGACATACCAAATCTTGAACTCCATTAGGATTAGGAAGCCCATTATTGTGAAGTAACTAAGTGTCCACAAATTAGAATGAACGGGAGAATTATTCATGCAATTGTCAATTAGTATCTAGAAATATTTTAACCAGATGAACATAAATTTGGACAGCTCAGAAATATATGCATTTCTTCAATTCTTGCAACACAGAAGTACACAGCTAAGATTTCTTTGTCGGCTCATAAATAAACTGAGCAGAATTCTAGAAAGAATGTTACATTGAATGAAAGTTGAGAAAACTTTGTTACCCTACATAAAGTTCAGATATGTACAACTAAGATAGTTCAGCTCAATACTACTAAAAAAATATATGAATAGCAAATTTGAATATTATTTGTCGGAATGCATTAATATAACATATGCATAGGAAGAAAAGAACAGCATAATACAGATGTATGGTACAGCTGCAGAAATAGAACAGCATTTTCTGCATAAGGATACAGAAAAGGATACAGGTGAAGGCTATACCAAGATGCTTGTATTAGTATACTGACCAAAAAAAGGGCAATTGTTTTCTTCAGTAATGGCGATCATGTTTTCTTCTATGATGTGCCCCATCATGGTATATCTCACGCTGCCCCGTAGACGCCTCATCAATCATGCTTGTTGCAGGATCAACATCAGAATATGCGCTTTGGGGATCAGATCTATCACTGAACTTATCTTGAGTCACAGACACTGATCTATGCCGGGTATGACTAGTTGTACTTACATCATTGCTTCTGACTCTTGACATGCGGTCATATTCTCTCTGAGGACCATCTTGTACAACTGCTTGATTCAGAATAATAGTCTGACCCATTTTTGTTGTACTTATAACCATATTTCCTATGATCATCAGAATTTCTTTGGTGTCCGCTGTTCTCATGATGGTGAGAATACCTTTGATCTACTGTGCTTTCTGAATCTTTAATACTTCTATTCTCATGATCAGATACTTTCTGGTACTGGCGTTGATGACTTCCATTTCTTAAGTCCTTATATGAATCCCTCGTGCCATGGTTCCTTGATGAAACATAAGAACTGCTTGTAGGATTAAAACTTCCTTGGTATGTGCCATCATGAGGACTATTCTTAAGCACACTCTGTGCAATATCACCAGGCACATCCAAATGGCAACCAATCCCTCCTGCCTGTTTGATCTCTTCCATATGCTCATCAATTATGTCTCTTAAAATCTCTTTTGGATTTCTCTTCGCTTTCTTGCCACGGTACGACGTTCTTCTTCGCTTGTAATCTCGCTCTTCAGCTAAAAGCTCCTCTCTAGTCTTGACTCTACCAAATTCCTGGCTATCTACTCGGCGTGATATAATACCATCATACTCCAGAACAGCTCTGTAGTTTGGTCGTTTTGATCGCTCCTCGCGGCCTCGTTCCAGTGCTTTTGAATATTCCAGTAAAAGCTGAAATTTGGCCGGACGTGGCGCTCGAAGTGCCTTGATCTTCTCCTCCAAGGAGAACCTCTCATGCAACGCCGCAATGGCAGCAGCAACTTGAGCAACAGACACAGAGGGCGTCCCAACATTTCCAAAATCACTTCCTTCTACACCTGAACCTCCACCGCCGTCAACACCGACGGCCAAACAAGACCCCGCACGCAGAATAGCCTCCCTCACCGCCGCGATCGCGAAGGATCTCCCGCTACTCTCTCCATACAGGATCCTCAGCTGCGTCCCTAGCCACGAGACGGCGTCGACAAGCCTCGGGCACTCAAACCGTATGGCCCTTGGGTCAACAAACCCAGACCCTCCACCCTCGGCGCCGCGCGCATCCTCCAGGGAGCAGCGCGCCTCCGACGCCGCCGCCTTGAGGCACAGCCGCAGCAGCACCCAGACATGGTCCCTCGTCGCCGCGTCGATCACGACCCCGTACCTCTGCGAGGCCGCGAGCACCCACCGGCGCATCTCGGCCTCCCACCGCGGGAGGCCAGAGCGCTCCGCCGCCGCCACCGCACGTGACGCGGCGTGGGTGTAGGACCCCGGCAGCACGCCGTGGGCGGCGGCGCCCCAGGAGTCCAACTCCCGGCGAAGGAGGCAGAGCTCCGACGGGAGGAGGAGGAGGAGGCCGCGCGGGGGAGAGGACGGGGCGGAGGGGGAGGGGGAGTAATCGGCGCAGTGGGCGGCGAGGAAGGCGGGGAGGGAGGAGGAAGCGGGGGGAGACGGGGTGGTGGTG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0257900.1 | 4 | 16637548 | C | G |
| Osa04LNT0257900.1 | 4 | 16637841 | A | G |
| Osa04LNT0257900.1 | 4 | 16639077 | T | C |
| Osa04LNT0257900.1 | 4 | 16639623 | C | T |
| Osa04LNT0257900.1 | 4 | 16640100 | T | C |
| Osa04LNT0257900.1 | 4 | 16641244 | A | G |
| Osa04LNT0257900.1 | 4 | 16641274 | C | T |
| Osa04LNT0257900.1 | 4 | 16641276 | T | C |
| Osa04LNT0257900.1 | 4 | 16641412 | C | A |
| Osa04LNT0257900.1 | 4 | 16641683 | T | G |
| Osa04LNT0257900.1 | 4 | 16640477 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0257900.1 | osa-miR5539a | Translation | 5.0 | 17.108 | 1 | 22 |
| Osa04LNT0257900.1 | osa-miR5797 | Cleavage | 4.5 | 19.055 | 1 | 21 |
| Osa04LNT0257900.1 | osa-miR5837.1 | Cleavage | 4.5 | 17.742 | 1 | 21 |
| Osa04LNT0257900.1 | osa-miR5837.1 | Translation | 5.0 | 11.908 | 1 | 21 |
| Osa04LNT0257900.1 | osa-miR5539b | Translation | 5.0 | 17.108 | 1 | 22 |
| Osa04LNT0257900.1 | osa-miR393b-3p | Cleavage | 3.0 | 18.285 | 1 | 21 |
| Osa04LNT0257900.1 | osa-miR1875 | Cleavage | 5.0 | 17.742 | 1 | 24 |
| Osa04LNT0257900.1 | osa-miR1875 | Translation | 5.0 | 15.78 | 1 | 24 |
| Osa04LNT0257900.1 | osa-miR2095-3p | Cleavage | 4.5 | 16.121 | 1 | 20 |
| Osa04LNT0257900.1 | osa-miR2097-5p | Cleavage | 3.5 | 10.076 | 1 | 22 |
| Osa04LNT0257900.1 | osa-miR2101-5p | Cleavage | 4.0 | 9.518 | 1 | 22 |
| Osa04LNT0257900.1 | osa-miR2926 | Cleavage | 3.5 | 15.863 | 1 | 20 |
| Osa04LNT0257900.1 | osa-miR2873b | Cleavage | 5.0 | 18.729 | 1 | 21 |
| Osa04LNT0257900.1 | osa-miR2873b | Cleavage | 5.0 | 14.297 | 1 | 21 |
| Osa04LNT0257900.1 | osa-miR2873b | Translation | 5.0 | 13.216 | 1 | 21 |
| Osa04LNT0257900.1 | osa-miR2863c | Translation | 5.0 | 12.971 | 1 | 24 |
| Osa04LNT0257900.1 | osa-miR5151 | Cleavage | 3.0 | 16.208 | 1 | 22 |
| Osa04LNT0257900.1 | osa-miR5487 | Cleavage | 4.5 | 15.34 | 1 | 21 |
| Osa04LNT0257900.1 | osa-miR5499 | Cleavage | 5.0 | 19.219 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0257900.1 | 4 | qCCFJ-4 | Physiological trait | Source activity | RM261 | RM3785 |
| Osa04LNT0257900.1 | 4 | gwt4a | Morphological trait | Seed | RG788 | RG190 |
| Osa04LNT0257900.1 | 4 | spp4-2 | Morphological trait | Panicle/flower | RG449 | CDO456 |
| Osa04LNT0257900.1 | 4 | An8-glum | Morphological trait | Panicle/flower | nan | nan |
| Osa04LNT0257900.1 | 4 | gwt4a | Morphological trait | Seed | RG788 | RG190 |
| Osa04LNT0257900.1 | 4 | nan | Morphological trait | Panicle/flower | RG788 | RZ69 |
| Osa04LNT0257900.1 | 4 | nan | Morphological trait | Root | RZ69 | RG449 |
| Osa04LNT0257900.1 | 4 | nan | Morphological trait | Root | RZ69 | RG449 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)