© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0258400.1
GTCCTGTTTGCCTCGATACTTAACCATGTGCATATTTGGGAGATGAAGCTGTAGTTGCATCACAGATGGATGTACCTTGCTCAAATCGAATCCATATATTCTCCATAGTGCTTCCAGAGGTGTCACCCACCGTGCATCCCTATACTGCCTGATCTCATCAATGTCATCTTCTTTACCTACCCCATTTACAGGCACAGATTCTCTCTCATGCCCCTTGTAATTGTGTTTGAATAGGTACTTCACGGCCTTTATACTTGAGCATACCTCCACATTTATGTGGCAGTTGAACATCTGTAGGAGGTAAGGGTTATAAGGAACTACCCACCTATTGTCTAGTGGACATTTTTGGACTATCACTGTGCAGCCGTCGTCGCGTCTCCTATACACTGGGTAAGAGTCCTTTTCTTGAATGGTAGTAGCGTTGAAAGGCTTAGGATAACTGTTCTTGCATGATGAGCGATTCTTCATGCATGGGCAATAGTGATTCAACTCACCGCAAGGACCATGCATCATATGTTTGATGACCATTGTATATAACTCTGGGTACTTACTTTGGTTCGGAAGCTCTGCGGAGATTACTCTGTCGTATTGCTTTGAATGTGTGTACTTGTACTTTTTAGTCATGATCAACAAGAAGTGAGCATGCGGTAGACCCCTCTTTTGGAATTCTACAACATAGGTATAGGCCTGAACTATACCAAGAATTCCCTTTTCGAACAGTTGTTTCTTCATCTCCTCTAATTTTGCCTTAAAAACACGAACGATGAGATCTGGGCGATCTTGAGGCGTTTGTCCAAACTTGAGCTCATGAATGATCTCTTCCCAGTTGGGGTTGCAGGTCATTGTGAGGAAGATATCTGGCTTTCCATATTTTCGTACTAAAGTCATTGCATCCATGTATCGACGTAATTTATCTCGAGGCCCTCCAATAAATGACGAAGCAAGGACTGTTCGTTTGCCAATTGCACTCCCTTTGTTTTCTCCAGTATTAACGCTATCCAATAGGCTTTGGTACAAATCTGCCCTTATCTCCTTTTGATGATTCCATATATAGTCCAACCGTGAGCTCTCAATCTTATTGTATGTGTCAACTGCAAACTGCTGGAGAAGACGTCCGCCATGCAATATTGGGTTAAATATGCCAGGTCTCATTTGGAACTTGTAGCAGTAGTAGTCTCTGACGGAAACACACAGTCTACTACCTGAATCTGCATTATATTAGAAGTGAATGACATGTATGATAATAAATCATCATCTTGATGGGAAATATATGAAATGCTAACCTGGGTCCTCATCACTGTTGTTGCGATTCTGGCGAGCCTTCATTATATCTTCCACCTTAACACCAAACTTTGGTATATCGGCATGCCACCCTAATTCAGCTTTGGGAAAGAACAGAGGATATGACAACGGATCATAGCATCCATAGTATGACCGGATGCCTTGTATATCATTGTTATTCCCATGTAGGATTACACTCTTTTCAAATGTCTTTCGTCGTTCGTTTCCCTCGACCCACACCGCAGCCACCTCTGAACTTATTGGCACATTGTACGTCCTCTGATCCAACCTTTGGTCAAGGTTCAGCATCACACGGCAGTCTTCAAGATTCTCGATTTGCCCCAAACTCCTAAATTGCTCAGCGTATGGATTACCACGCAGAACGTTGGTTAGGATGTTGACTACTTCTTGATCTTGTTCATATAACTCCTGTCGGCAACGGCGGTACCGATGTTCTAGGCTTGGATCATCATCATAGAAGTATAACTCGAGATGCTTAGGGTCTGAACCATTCGTACCAAATGAACTTATATTATGGTACATTTGGCCATGAGCTCGAAACGTGTAGAAACCAGTTTTCCTCATGTCACTTGTTTCTCTGTCAAGATGACAGTAAAGAGAAGTGAATGAGAAATGCCCATTGAAAAACCTTATGTTGTTGCGAAAATGTTGGGCGTAGGAATCATTGCTCGTCCAGAGCCTCATGAGTTCAGGAGGTGTGTCTTGATGAGCTAGTCTGGTTTGTCCATTTCTGCAGCAGAAGCCCTTTGTCTCATGCTCAAACTTCTTTGCGTTGCAGAATTGACAATTTTCCACTGGTTTTAGCATATGAGTGCACTGTGGTATGTTGCTATACACGAGCTCACAGGGATCAGGGACGCTAGAGCACTCGGGTATGGCTTCTACAACCTCTTTGATTTCTACGTCCTTGTGTGTCTCCCAATCTGAAATGTTTTGGCGGTAGACATAAGTTTACGATTAACATGATAATAACAAATGGTGACAAGATTACCTTGACCATCAAACATGTCACTCTCCTCATTGGTGTCATCGTCAAATATGTCTTCATCACCTACATGGAAATCGCTAAGTGTATATATATGCTCTACCTGACCATATTCAAAGTAAACCTAAATATAGGTGAGCAGTACCATCATCATCGATGAATAATTTTGATGGATGCTCTACATTGTCGGCACCTTGATTTGTTAAACAAATATTTTCTGTTGAAAGAACATGGTTAGTACTATACCAAAATATATGTTTCTCAAAACATGAAACAGATGCATATAGCTAGCACACTCACCGGTATTTGTTATGCTTTGCTGCTTAGGAGGGTCTATGCTGTTGGCTGTTTGAGTGCATATCGAAGGATCTTCTCCTACTGACACAGAAGTCCTTGTGTCCCATCTAATTGTGAAGCTTTCATTTTGACGAGATACCAATGCTTGTCTTTCGTCATGTGCTATATGTTTCCTATGTAATCTAGTCGGAACTTGAGGTGACGTATCTAGCGCAATATACGTAGGACTCTCCATTGCAATGGAATACTTGCTTGGAGTGTTGCGTCGCAATGCACGGTTAGCAATGACCTGTTCTATCTTAGCTTTCTTTTGGTCTGGTCCCATATTTCTGTATTTCATCCTTGCAAGTGCCTTTTTTTCTTGTTTTGGAATTGAACCCTTATCCTGGCTTGCAATTTCTTGTTCTGCTTGCCCGGAATGTGTAGCATGCAATGGCTCCTCCACATTGGCAAGGGCATTTAAATCTTTGTTGCGCTTATAGGCTTCACGACGCTTTTTTAGTTTCTCCTCTTTCTCTTGGAGAGTCATTTGCGCATATCGCTCCCGATCTCTCTGTCTTCTTCGTATATTTGGATCCAAAAGTGGAGATGGCGATCCAAATGATGTGGTACCAGCATCAAGCATGGAAGATGGAGCTGTTGACAAACACATATATAGGCAATATAGAAAGTGTTATCAAGGTAATTGAAAGAATAGCTTGCAGAATATAATTGATTCTTTGTGGTTACTATCTTTTGTTTCCTTATTCCAGATTTACCTTGACCATCAAACATATCACTCTCATTGGTGTCATCGTCAAATATATCTTCATCACCTACATGGAAATCGTTATGTGTATATATATGCTCAACCTGACAATATTCAAAGTAAACCTAAATATCCGTGAGTAGTACCATTACCATCGATGAATACTTGTGATGGATGCTCTACATTGTCGGCACCTTGATTTGTTAAACACATATTTTCTGTTGAAAGAACATGATTAGTACTATACCAGAATATATGTTCCTCAAAACATGAAATAGATGTATATAGTTGGCACACTAACCGGTATTTGTTATGCTTGGCTCCTTAGGAGGGTCTATGCTGTTGGATGTTTGTGTGCATATCGAAGGATCTTCTCCTAGTGACACAGAAGTTCTCGTGTCCCATCTAATTGTGAAGCTTTCATTTTGACGATATACCAGTGCTTGTCTTTCTTCATGTGCTACATTTTTCCTATGTAATCTAGTCAGGACTTGAGGTGATGTATCTAGTGCAATATACGTAGGACTCTCCATTTCAATGGAATATTTGCTTGGAGTGTTGCGTCGTAATGCACGATTAGCATTGACCTGTTCTCTCTTAGCTTTCTTTTGGTCTGGTCCCATATTTCTGTATTTCATCCTTGTAGGGGCGTTTTTTTCTTGGTTTGGAATTGAATCCTTGTCCTGGCTTGCAATTTCTTGTTCTGCTTGCCCGGAATGTGTAGCATGCAATGGCTCCTCCACATTGGCAAGGGCATTTAAATCTTTTTTGCGCTTATAGGCTTGACGGCGCTTTTTTAATTTCTCCTCTTTCTCTTGGGGAGTCATTTGCGCATATCGCTCCCGATCTCTCTGTCTTTTTCGTATATTGGGATCCAAGTGTGAAGATGGCGATCCAGATGGTGTGGTAGCATCAAGCATGGAAGATGGAGCTGTTGATAAACACATATATAGGCAATATAGAAAGTGTTATTCAAGGTAATCGGAATTTCTCCTTTGCTTTACCTTTCTATACAGGAGTACAGGTAGACAATTGCATAAGCACTTGGCAAGCGAAAGGATCAACTACGATATTATACCAAGTCATGAACAGTGCATCGAGGCTACCTGATGACATTCTTACGATATACATGTGTGTGCCTGAAATTTAAACTTTCTTCTACTTCAGAGGCTACATGATGACATTCTTGCTGGTTGCTGCTGCTAGCTGCTGTGCTACCTGGTGTATTCTTTTCTTGCAATTTTGCTCCTAGCTTCTATGCCAAGCTAATATGTGGTGTGGTGTGGTGTGGTGTATATATGTAACTAGCTAGCCTATAATCCTACTCGGTACGCTTACGCTCGGAGAGAAAATCGGAGATGTTGCGATGGCACAACCGTGATGTAAGCGGTGGACGGACGGACGGACGGACGAACGGA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0258400.1 | 4 | 17067475 | T | C |
| Osa04LNT0258400.1 | 4 | 17067366 | T | C |
| Osa04LNT0258400.1 | 4 | 17067279 | A | G |
| Osa04LNT0258400.1 | 4 | 17071001 | A | G |
| Osa04LNT0258400.1 | 4 | 17071051 | A | T |
| Osa04LNT0258400.1 | 4 | 17071118 | G | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0258400.1 | osa-miR5532 | Cleavage | 5.0 | 13.782 | 1 | 22 |
| Osa04LNT0258400.1 | osa-miR5534b | Translation | 4.5 | 10.234 | 1 | 21 |
| Osa04LNT0258400.1 | osa-miR5804 | Cleavage | 4.0 | 20.371 | 1 | 21 |
| Osa04LNT0258400.1 | osa-miR1319b | Cleavage | 5.0 | 16.231 | 1 | 24 |
| Osa04LNT0258400.1 | osa-miR5826 | Translation | 4.5 | 21.425 | 1 | 24 |
| Osa04LNT0258400.1 | osa-miR5834 | Cleavage | 4.5 | 14.251 | 1 | 21 |
| Osa04LNT0258400.1 | osa-miR5837.2 | Cleavage | 4.5 | 19.972 | 1 | 21 |
| Osa04LNT0258400.1 | osa-miR5837.2 | Cleavage | 4.5 | 18.052 | 1 | 21 |
| Osa04LNT0258400.1 | osa-miR156a | Translation | 4.5 | 11.424 | 1 | 20 |
| Osa04LNT0258400.1 | osa-miR156b-5p | Translation | 4.5 | 11.424 | 1 | 20 |
| Osa04LNT0258400.1 | osa-miR156c-5p | Translation | 4.5 | 11.424 | 1 | 20 |
| Osa04LNT0258400.1 | osa-miR156d | Translation | 4.5 | 11.424 | 1 | 20 |
| Osa04LNT0258400.1 | osa-miR156e | Translation | 4.5 | 11.424 | 1 | 20 |
| Osa04LNT0258400.1 | osa-miR156f-5p | Translation | 4.5 | 11.424 | 1 | 20 |
| Osa04LNT0258400.1 | osa-miR156f-3p | Cleavage | 4.5 | 23.892 | 1 | 22 |
| Osa04LNT0258400.1 | osa-miR156g-5p | Translation | 4.5 | 11.424 | 1 | 20 |
| Osa04LNT0258400.1 | osa-miR156h-5p | Translation | 4.5 | 11.424 | 1 | 20 |
| Osa04LNT0258400.1 | osa-miR156h-3p | Cleavage | 4.5 | 23.892 | 1 | 22 |
| Osa04LNT0258400.1 | osa-miR156i | Translation | 4.5 | 11.424 | 1 | 20 |
| Osa04LNT0258400.1 | osa-miR156j-5p | Translation | 4.5 | 11.424 | 1 | 20 |
| Osa04LNT0258400.1 | osa-miR399h | Cleavage | 5.0 | 21.593 | 1 | 21 |
| Osa04LNT0258400.1 | osa-miR156l-5p | Translation | 4.5 | 11.424 | 1 | 21 |
| Osa04LNT0258400.1 | osa-miR156l-3p | Cleavage | 4.5 | 23.892 | 1 | 22 |
| Osa04LNT0258400.1 | osa-miR164e | Cleavage | 4.5 | 24.113 | 1 | 21 |
| Osa04LNT0258400.1 | osa-miR416 | Cleavage | 3.0 | 17.908 | 1 | 21 |
| Osa04LNT0258400.1 | osa-miR528-5p | Translation | 4.5 | 17.727 | 1 | 21 |
| Osa04LNT0258400.1 | osa-miR1435 | Cleavage | 5.0 | 21.791 | 1 | 20 |
| Osa04LNT0258400.1 | osa-miR1438 | Cleavage | 4.0 | 12.961 | 1 | 22 |
| Osa04LNT0258400.1 | osa-miR1439 | Cleavage | 4.0 | 20.015 | 1 | 21 |
| Osa04LNT0258400.1 | osa-miR1855 | Cleavage | 5.0 | 20.18 | 1 | 21 |
| Osa04LNT0258400.1 | osa-miR2093-3p | Cleavage | 4.5 | 18.335 | 1 | 20 |
| Osa04LNT0258400.1 | osa-miR2095-3p | Translation | 5.0 | 19.954 | 1 | 20 |
| Osa04LNT0258400.1 | osa-miR396f-3p | Cleavage | 4.5 | 18.413 | 1 | 24 |
| Osa04LNT0258400.1 | osa-miR2867-5p | Translation | 5.0 | 20.075 | 1 | 22 |
| Osa04LNT0258400.1 | osa-miR2874 | Translation | 4.5 | 23.651 | 1 | 24 |
| Osa04LNT0258400.1 | osa-miR2876-3p | Cleavage | 5.0 | 14.779 | 1 | 21 |
| Osa04LNT0258400.1 | osa-miR2879 | Cleavage | 4.0 | 19.563 | 1 | 24 |
| Osa04LNT0258400.1 | osa-miR5082 | Cleavage | 3.5 | 18.09 | 1 | 24 |
| Osa04LNT0258400.1 | osa-miR5161 | Cleavage | 4.5 | 15.958 | 1 | 20 |
| Osa04LNT0258400.1 | osa-miR5161 | Cleavage | 4.0 | 20.01 | 1 | 20 |
| Osa04LNT0258400.1 | osa-miR5491 | Cleavage | 5.0 | 14.368 | 1 | 21 |
| Osa04LNT0258400.1 | osa-miR5491 | Cleavage | 5.0 | 20.837 | 1 | 21 |
| Osa04LNT0258400.1 | osa-miR5496 | Cleavage | 4.5 | 18.463 | 1 | 21 |
| Osa04LNT0258400.1 | osa-miR1847.1 | Cleavage | 3.5 | 15.929 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0258400.1 | 4 | An8-glum | Morphological trait | Panicle/flower | nan | nan |
| Osa04LNT0258400.1 | 4 | nan | Morphological trait | Root | RZ69 | RG449 |
| Osa04LNT0258400.1 | 4 | nan | Morphological trait | Root | RZ69 | RG449 |
| Osa04LNT0258400.1 | 4 | qCCFJ-4 | Physiological trait | Source activity | RM261 | RM3785 |
| Osa04LNT0258400.1 | 4 | nan | Morphological trait | Panicle/flower | RG788 | RZ69 |
| Osa04LNT0258400.1 | 4 | gwt4a | Morphological trait | Seed | RG788 | RG190 |
| Osa04LNT0258400.1 | 4 | gwt4a | Morphological trait | Seed | RG788 | RG190 |
| Osa04LNT0258400.1 | 4 | spp4-2 | Morphological trait | Panicle/flower | RG449 | CDO456 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)