© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0258900.1
ATGCACTTGAATTATTATATATTGTGAAACATGATTGTTTCACTTGTTCCTCACAATGCATGGTTACAGCCGCACACATTGGGAAGCCCGTCAACCACCACAACTGGGAAGAATTAACTCATAATCTAACACAGAGATAAAACAACACAACTCATAATCTAACACAGATAAAACAACACATTGTAACACTCAATAAAGCACAAGGGGTCTATGGATCATCTAGCGAATTCTGTGCTTAGAACGACATTGTTCTCAAGGTTATAAACCCCGCTTGTTCCACTTCCTGTGTACCATGATGATGTTGTGCTCCCCATCTCTGTGAGGATGAGGCCATCGAGCACTAGCGGCGGTTGTGGGCATTGTTGTACTTCATCTGCCAATGCTAGTCGTCGAAGCTGCTCCGCCACTTGCCTCATTGTTGGCCTTGATGAACTTGGATTAGCCAAGCATTGACTAGCTAGTGATGCTGCCTGACAGATAACTCCCATGTTGGCTTCATCTACTATGTCACTGTCCAGGAGCTCAACGAGTTTGCCACTTTCCATTGCCCCTTGAAATATTGGGATCAAGCTCGTCCGTTCTTTTGAAAGTGGCTTCTTACCCGTTAGGAGCTCAAGAAGAATGACCCCAAAGCTGTATACATCATTCTTGGCTGTGAGCTGGTACTCAAGTAGATAGTCTGGGTCGAGATATCCCGGTGTACCTTTTACAACAGCTTGGGTTTTCTCATCAATCGTTGAGCAACCAAAGTCAGACACCTTTGCAACCAATCCTTCAGCAAGAAGTATGTTGGCTGGCTTCACGTCGCCGTGGAGTATTGGGCGCGGCAGTGAGTGGAGATGTGCAAGTGCATTGGCGGATTCTGCAGCAATCCTTAAGCGGGTCGCCAGTGTGACGTGGAACTTCCTACTCCTTTGGAGGTCCAGTAGCTCTTGCAGTGTCTTGTTCTGCACGAACTCATAGATTAGCATGGGGGCCTCGAACTGCAGGCAGCAGCCGACTAGTTTGACGATATTTGGGTGGTTGACACGACAGAGTATGACCAGCTCCTGCACGAAGTCGGCTCTTCTGCTCTCATCAACCTCGTTGCACCTCTTTATCGCAACAGTGGTGCCGTCGAGGACAGCCTTGTAAACGGTCCCCTGCCCTCCTTTGCCAACAATGTTCTCCTTGGCGAAATTGTTTGTGGCTACCTCGATCTTCTCTCTGTCGTAGAGGGTGAACTCAGCGCTGCTCTCTACTTTCATCAGTTCTAGTAAGATCTGTCCTCCGTGTTGTTGAAAATACATGTCAGTCTGTCTCTGCAGAGCTTGTCTTTTGATACTTCGTTTGTGCTGGATCACTTCTCGTACAAGAAAAACAACGAGGCCAACGATAGCAAAACCGGAAATTCCAATAGCTACTTTTCCTCCAGTATGAAGGGTTTGATCTCTCTCGCATGTCCCATTGAATGCGTTGCCTTTGGGACGACTGCGAGGGCATAAGCACTCGAACCCGCCAGGAAGATTATGGCAAGTTCCAGGCACGGAACAAGGGTACTTCGGATCCGCACACTCGTCTATATCTGTGCAACCGTGCTGCCCGTCCTGCAGGTAGGGGTTACCTTGGTACCCTTCGGAGCAGTTGCAGATGTAGCCTGGTCCGTTGGACGAGTTGAAGCACTTGCTGTTGTGGCTGACACATGCATAGGTGTCAACCTTTCTGCGGGCTTTATCACAAGTCTCGTTTCCGATAGCCCAATCCACCACCAACGGCACCCTGCCACCGTTGCTGCTGTTAAATTCCAGCGAGCTCACGTAGCTCGTCCGGAAGCTGAAGGCCTTCGACTCCATCAGCACCGCGTAGCTGCAGCGGCTGACGTTGTAGATCTCCGAGGTGTTGAAGCCCGTGTCGAACCTGACGCGGTAGTACTTCAGACCCCTGGGGATGGCTGTCTGGCAGCAGCCTATCCCGGAGCACGACCCGTTGGTGGCGAGGCTCGTCAGGTCGCCTCCCTGGCACATGGCGACGCACCCGCTCGTGTACTTGCCCATGTTGTCGTCGTCGGTGATGTACGCCAGCGTCTGGCACCCGACGACGGTGAACTTGTTGTCGGCGTCGGAGATCGTCAGCGGCGTGCCGGTGAAGTTGATCTGCCAGTCGTTGTAGTCCATGTCGCGGGAGCTGGTGTTGTAGCAAGCGGAGGAGATGGAGTTCGTCACCCGGGCCTGCCCGGTCGGCAGGGAGATGCTGAGAACCTCCACATTCCCGTGGAACGGCCTGTAGACGTGGTTGTCGTCGACGTCGCAGTTCAGGTAGAAGCCTGGAACGGCGCAGCCGTCGGACTCGCTGCCGTTCCAGACGCCGAACGGGTAGGGGATGTCTACGTCGCCGCACTTCCTTTGGCAGTTGCCGGGCGGCGGCGGCGGCGGCGGCGCTCGTGCTCCGGCGACGGCGGCATGGAGCCTCGCCGTAGCAGCCGCTACGCCCAGCCATATTGTTACGGCTGATAGTAGCGTGTGGAACTGGAACGCCATGGATTTCGATCGATCGGGGCTGAGATTTTTCTTGTGTTCTAGCTAGTGTGCGATGGATTGAGTGGTGTTTGCCGCTACGTACATTGGCGATTTGTGGCGTTAACCGGAGGAGGCCATGTGTATATGTGTGCACAAGTTTTTTCTCGGCACCCAACATAATTGCAACGAGACATGGAAAGCGAGTAAGCG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0258900.1 | 4 | 17906500 | C | G |
| Osa04LNT0258900.1 | 4 | 17906372 | A | G |
| Osa04LNT0258900.1 | 4 | 17906174 | A | G |
| Osa04LNT0258900.1 | 4 | 17906178 | G | A |
| Osa04LNT0258900.1 | 4 | 17906203 | T | C |
| Osa04LNT0258900.1 | 4 | 17906285 | A | G |
| Osa04LNT0258900.1 | 4 | 17906629 | T | C |
| Osa04LNT0258900.1 | 4 | 17906824 | C | T |
| Osa04LNT0258900.1 | 4 | 17906966 | C | T |
| Osa04LNT0258900.1 | 4 | 17907028 | A | G |
| Osa04LNT0258900.1 | 4 | 17907115 | C | T |
| Osa04LNT0258900.1 | 4 | 17908014 | G | A |
| Osa04LNT0258900.1 | 4 | 17908719 | G | A |
| Osa04LNT0258900.1 | 4 | 17908902 | T | C |
| Osa04LNT0258900.1 | 4 | 17909218 | C | T |
| Osa04LNT0258900.1 | 4 | 17909483 | A | G |
| Osa04LNT0258900.1 | 4 | 17909498 | T | C |
| Osa04LNT0258900.1 | 4 | 17909508 | A | G |
| Osa04LNT0258900.1 | 4 | 17907736 | G | A |
| Osa04LNT0258900.1 | 4 | 17907416 | G | T |
| Osa04LNT0258900.1 | 4 | 17907574 | C | T |
| Osa04LNT0258900.1 | 4 | 17907785 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0258900.1 | osa-miR5539a | Cleavage | 4.5 | 19.447 | 1 | 22 |
| Osa04LNT0258900.1 | osa-miR5539b | Cleavage | 4.5 | 19.447 | 1 | 22 |
| Osa04LNT0258900.1 | osa-miR169p | Cleavage | 5.0 | 18.124 | 1 | 22 |
| Osa04LNT0258900.1 | osa-miR171g | Translation | 4.5 | 21.205 | 1 | 21 |
| Osa04LNT0258900.1 | osa-miR530-5p | Translation | 4.0 | 24.115 | 1 | 20 |
| Osa04LNT0258900.1 | osa-miR169r-5p | Cleavage | 4.5 | 18.632 | 1 | 21 |
| Osa04LNT0258900.1 | osa-miR2120 | Cleavage | 4.0 | 23.123 | 1 | 24 |
| Osa04LNT0258900.1 | osa-miR2927 | Translation | 5.0 | 14.662 | 1 | 23 |
| Osa04LNT0258900.1 | osa-miR5154 | Translation | 4.0 | 24.129 | 1 | 24 |
| Osa04LNT0258900.1 | osa-miR5525 | Cleavage | 5.0 | 17.397 | 1 | 22 |
| Osa04LNT0258900.1 | osa-miR5832 | Cleavage | 5.0 | 20.457 | 1 | 21 |
| Osa04LNT0258900.1 | osa-miR1436 | Translation | 4.5 | 19.835 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0258900.1 | 4 | gwt4a | Morphological trait | Seed | RG788 | RG190 |
| Osa04LNT0258900.1 | 4 | gwt4a | Morphological trait | Seed | RG788 | RG190 |
| Osa04LNT0258900.1 | 4 | nan | Morphological trait | Panicle/flower | RG788 | RZ69 |
| Osa04LNT0258900.1 | 4 | qNOT4-2 | Resistance or Tolerance | Drought tolerance | RG449 | RG788 |
| Osa04LNT0258900.1 | 4 | qFRP4-1 | Physiological trait | Source activity | RG449 | RG788 |
| Osa04LNT0258900.1 | 4 | An8-glum | Morphological trait | Panicle/flower | nan | nan |
| Osa04LNT0258900.1 | 4 | nan | Morphological trait | Root | RG449 | RG788 |
| Osa04LNT0258900.1 | 4 | qCCFJ-4 | Physiological trait | Source activity | RM261 | RM3785 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)