© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0259700.2
TATATACTCCCTCTGTCCCACAGAAAACAAACCTAGATTGGACGTGACTCCGTCCAGGTTCGTTGTACTAGAATATGTCACATATAATTCTAGATTTGTTTTTTATGGGACGGAGGAAGTACAATCTATGCCTACTGATGACATCAACTTTCAATGGTCACACTGCATAAGCACAGCCCTGATGGCTTGAGCGTCGACGTGTGCCATTCAGATCCCGCAGGCGCGGTCGGATCATACATCAGAGTCTGATACCCAGGCTCTTCCTCCTGGGAAAACAGCAGCAGCTTCCCATCAAGCACCCCAAGGCTGAACAGAGTGGCTGAGCTACCGGTAAGCGGCACCGGGATCTTCTGCCATGAACTGTCTGAAGGGTTGAAGATCGCGAGTGACCGCTGGTTCTTCCACTCGATGCAGAACAGCCTTTTGTTGATGACAGCATGAGAGGTGACCATGACACAACCCTTCTTGATCTCGGTCCAGGAATGGAGAATGGGATCATACACGTCAATGAAACGGGAATTGCCAATGGTGAAGCTTGACCGGCCACCCATGATGTAGAGCTTGCCGTTGAAGCTGCAGGCAAAGGAGCCCCACCTTGGTCTGCGAAGGCTCTCTATTATTGTCCATTTGTTTCTTTGTGGATCATATACTTCAACACTTGACAAGCCATCGCCATCAGAACCAAATCCACCAGCAACATATACTGCACCATTGACCTCTGCACATGCGAAGTCACGACGGGCCACGTTCATCTTGGCCAGTGCAGCCCACCTGTTCAGACGAGCATCATACTGATAAACTTCATCAGAAACACATTCTTTTCCATAATCAACACCATAGCCAGCCATGACAAGCAGCTTTCCATCAAGAACAACCACACTAAATCCAGCTTTAGTCAGTCCAGGCATAGGAGGAAGCATCCTATTCTGCTGCTCCAGGCTCCCCAGCACCTCCCAATAGGGTCCCTTTCCTCCATCTCCAGTGATCAGGGCATAAATCCGCTCTTCAAGCCTCCCGACCTCCTTCCTAACAGCAATGAACTCCTTGCTCCCAATGAATGACATCCAACTCTTGGACACTGCACCCATGACAGGGAAGTAGCTCCGAGGGACAAGGGCAAGGCATACTTTCGCTAAGTCTTCTGGCAAACCAGGTATCAGTGCTCCGTATGAATCACCTTGGGTTCTAGTAGGAAACTTCAGCTGCATTGTAGCAGGGAGGTTGGTCTGTGCTTTAACAAATGGCTCTCTTGCTCCAACAAGTGTTAGCATTGCCACAAGCAGCAGCAGGGCACCTTTTAGGCTTTAGCACTTCGTTTTGTTAACACTAAACAGCTTAAATGATCCCTTTTATCACTTGCTTAGTTGCTATGTATCACGGCTGTCCTAGCAGGGGGATTCATGATATCCATCACCAACGGGGATCATCAGATAAAATGGTCTGAATGATGCGAAAATGAGGTTCTTCAGCTCAGATTTCTCTGTCTTAATCTTTTCTGTGTCAAATGCCATCCGATGGTGGAAGACCTTAAAATGGATTCTCCTGATCTCCTTATTAATGAAGTAAGAACATGTCCCTGTCTTGCACATTTGGCATTCAATATCTAAATAAAATAATGGATACCATTTATGCTGGATAGAAATAGGATGTTAGCATCCGTCATTTAGGTTATTATTAGTGTACCAATGGCTATACGATTTTGATAGCCATTAACCACCTGTGGTTTCCATTTTCATCACAGCCAGTTACCTACATGGACAAAATTAAAGAGATAATTTTTTAGAGTACGGTTTTTCTCAAATAAAATTATTAATTACAAAAATCAAAATAACAGTACAAGTATTAAAAAACATCAGACAAATTGAAGATTAAATCATATATAAACCGGAGATCATACAAATATAGGGAGTCATCATACAATTACCACTGCTTTAAAATAAAAAAAATTGATCAGAGAATCAAAATTGACATATAGGAAACTAAAATACCGGAAATATTCAGGGGTTATATATGAAAGGTAAAAAAGGGTGAAACCAAGGTGTGTCCATCGCCTTGATGATGCGCAATAAGGGAAAGTTTGACGTTTCTCCATGCTATATTTGCTTTAATGAATCACTAAGTCTAAAAGCTCATTTCAAAGAACTTAAACTAGATTTTACTTCCCCTACTCAATAAACAGGGTAAGTCCATAATAACCCTTATCCTCGCCAAAATAGATACTGCCCCTACTTAATAAACATGGATGAATCCATAATAATTCTTACCCTTGCCAAAATAGAGATATCGCATTCAAAGAAGTTCAATTGAAAATAGTGTATGGGTTACAGGCCATGCTGCCAACTCTCACAAATGTAGCTGCTAGGCAGCAACATTGTGACTCTTCTAGACACCACCTTGTTATATGACACAAAGCATAATTGCCCCATACACGAACAAATGACTTGAAAAAATGGGTCGGGGATTTATTTTAGTATTATAAAATGGGTAGTTTAGAAAAAGTAAGCATAATATTGCTTACTTTTTCTATACTACCAGTTTTACAATAATATACAAAATAATCCCCAGAACATTTTTAACATACAACTTGTAGGTCATATTTTTTGTATCAGGACAACATGCTTCTCAACGTGTATCATGGTGGCGTCTAGTGGAATCACAATCTTGCTGAGAGTAGTGAGCAAAGCAACCCCATCATTTCAGATTGAACTTATTTGACCAAATATCTCTATCTGGTATGAGTTAAGGACTATTATAAATACACTCTGTTTATTACGTAGGGGCAGCAATAATTATTATAAGAGTCTAAATTAGATCTCAGAGCCGACAAGAGCTCATGTGTTGGATGTTCTATGCCAGGTGCTTTTAAATGAGCCTACAGATGCTTACAATTCATCAAGGCAAGAATGGAGAAACATTAATTTTCCTCTTATTGTGCATCATTAAGGCCATAAAATACTCATTGATTTCATCATATTTACCTTAACTTTCATATATAGCCTCCTGACACTTCCGATTGTTTAGCTTTCAGTATATCAATTCTGAGTCTGTGATCAAACTATGAATATGTATTAAAGCAAAGGTAAACAATACGATGACTCCTTATATTTGTATGCTGTCTAGTTGGTACATATATGAAATGTAAACCATCAATCTATCTGATGTTCAGTGATGCTTTTTTTGTTGACATGGACCTTTTTGAACATCTGACCACATTTCAGTAGTGAGATTCCTCGTGCACAAATATGTACGGTGTACTTCAAAGTTGAACCTGGAATAATATGGAAATTTTGGCTGGAGTCTGGAATGTTGAAAGCTTTGGAGCGTAACAAGCCAACGATAATGGAGAAACTCTTCAGAGTTTTGGAAGGTTAGGAAGAGCAAGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0259700.2 | 4 | 18604099 | A | C |
| Osa04LNT0259700.2 | 4 | 18605246 | C | A |
| Osa04LNT0259700.2 | 4 | 18605529 | T | C |
| Osa04LNT0259700.2 | 4 | 18605727 | A | G |
| Osa04LNT0259700.2 | 4 | 18606890 | G | A |
| Osa04LNT0259700.2 | 4 | 18607567 | C | T |
| Osa04LNT0259700.2 | 4 | 18607691 | A | G |
| Osa04LNT0259700.2 | 4 | 18607764 | G | C |
| Osa04LNT0259700.2 | 4 | 18607834 | A | G |
| Osa04LNT0259700.2 | 4 | 18607871 | T | C |
| Osa04LNT0259700.2 | 4 | 18602873 | T | C |
| Osa04LNT0259700.2 | 4 | 18605006 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0259700.2 | osa-miR5788 | Translation | 5.0 | 6.819 | 1 | 21 |
| Osa04LNT0259700.2 | osa-miR156f-3p | Cleavage | 4.0 | 15.749 | 1 | 22 |
| Osa04LNT0259700.2 | osa-miR156h-3p | Cleavage | 4.0 | 15.749 | 1 | 22 |
| Osa04LNT0259700.2 | osa-miR156l-3p | Cleavage | 4.0 | 15.749 | 1 | 22 |
| Osa04LNT0259700.2 | osa-miR169f.1 | Translation | 5.0 | 22.142 | 1 | 21 |
| Osa04LNT0259700.2 | osa-miR169g | Translation | 5.0 | 22.142 | 1 | 21 |
| Osa04LNT0259700.2 | osa-miR169h | Translation | 5.0 | 22.142 | 1 | 21 |
| Osa04LNT0259700.2 | osa-miR169i-5p.1 | Translation | 5.0 | 22.142 | 1 | 21 |
| Osa04LNT0259700.2 | osa-miR169j | Translation | 5.0 | 22.142 | 1 | 21 |
| Osa04LNT0259700.2 | osa-miR169k | Translation | 5.0 | 22.142 | 1 | 21 |
| Osa04LNT0259700.2 | osa-miR169l | Translation | 5.0 | 22.142 | 1 | 21 |
| Osa04LNT0259700.2 | osa-miR169m | Translation | 5.0 | 22.142 | 1 | 21 |
| Osa04LNT0259700.2 | osa-miR437 | Cleavage | 5.0 | 13.236 | 1 | 21 |
| Osa04LNT0259700.2 | osa-miR816 | Cleavage | 1.5 | 22.539 | 1 | 20 |
| Osa04LNT0259700.2 | osa-miR2093-5p | Translation | 3.5 | 22.672 | 1 | 20 |
| Osa04LNT0259700.2 | osa-miR2866 | Translation | 4.5 | 19.918 | 1 | 20 |
| Osa04LNT0259700.2 | osa-miR2905 | Cleavage | 4.5 | 13.359 | 1 | 21 |
| Osa04LNT0259700.2 | osa-miR2871a-3p | Translation | 4.5 | 15.089 | 1 | 21 |
| Osa04LNT0259700.2 | osa-miR2871b | Translation | 4.5 | 15.089 | 1 | 21 |
| Osa04LNT0259700.2 | osa-miR3981-5p | Translation | 5.0 | 23.302 | 1 | 21 |
| Osa04LNT0259700.2 | osa-miR3981-3p | Cleavage | 5.0 | 22.35 | 1 | 21 |
| Osa04LNT0259700.2 | osa-miR5339 | Translation | 5.0 | 15.6 | 1 | 21 |
| Osa04LNT0259700.2 | osa-miR5506 | Translation | 4.5 | 22.074 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0259700.2 | 4 | qCCFJ-4 | Physiological trait | Source activity | RM261 | RM3785 |
| Osa04LNT0259700.2 | 4 | gwt4a | Morphological trait | Seed | RG788 | RG190 |
| Osa04LNT0259700.2 | 4 | gwt4a | Morphological trait | Seed | RG788 | RG190 |
| Osa04LNT0259700.2 | 4 | qNOT4-2 | Resistance or Tolerance | Drought tolerance | RG449 | RG788 |
| Osa04LNT0259700.2 | 4 | nan | Morphological trait | Panicle/flower | RG788 | RZ69 |
| Osa04LNT0259700.2 | 4 | nan | Morphological trait | Root | RG449 | RG788 |
| Osa04LNT0259700.2 | 4 | qFRP4-1 | Physiological trait | Source activity | RG449 | RG788 |
| Osa04LNT0259700.2 | 4 | An8-glum | Morphological trait | Panicle/flower | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)