© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0260700.1
GTGAAACATTATGCTATTTTTACATATTTATACTAGATTTTTGAATAAAACGAACGGTGGAACATTATGCGAAAAGCCATCGGCATCATACATTTTAAAACGGAGGAAGTAATACTTTCAGGCAATATCTAATCACTTTGAGCTTTGAACACTGAGGCACCCTTGGAGAGAAGGTAGTGGATTCAGACCTGGTCCAGCTTTCTTTTTCCTCCTGAGGCACTGTCTGTTGTTTCTTTTTCATGTATGGAATGGCTGGCTACACAAATGTTATCCAATGAGAAATGTAAATGCGTCCCTCAATGAGATTATTCCTTGCACAAATCTGCTCCTTGGTTCAATAACGACGACTCGCCGCACCCCTGGAGCTGACAATTGCTCCAAAACCTCCAGGAAGGTACTAGTGCTCAAGCAGGTATGACAGTGTCTTCGGCCATTCACCTGGTATTGCAGCTCCAAGGCATGCTCCACCGTCACCTGTTCAAGCTCAATACGAGTGTAGACATCATTCTTGCCTAGAGCCATGATATCACTGAGCGAGTAGACATCAAGGAGAGCGCCATTATCGTCAACTATAGGAATTGAGCTTACTCTATCTTCAAGCAGCAAATCCAGGCATGAATTTAGAGGAGTGCTTGGTCGCGAAGTTCTAAGCTGTCTATTGCTTGCCTTGCCAGTATGTGGTGACCATGTACCAATAGGCATACTGACAATCTGGTTTTGCAGAAATGAGTACCCTTCAGGCTGTTCTTGCAGCTTTGAGCAAATAAATTTCACAATCCCTGGAAGGGTTGCAAGACCAAGCAAAGGCATCCCTGATGAATCCGTTGAGGGCTTAAAGATAGGAACTGAAGATATTTCATTTCTAATTATAGCCAATGCCACATCCCTTAAATTATCTGAATCCTTAACATGAATTAATGGCCTTCTCTGAATGGCAGCAACATCAGGTCCCCCATAAAACTGCAATTTTGCTTCTTTCCAAGCAGACACTGAATGCATTTCAAGTTCCTCATGGCCAAGAGTTCGAATGTTTCTCTGCAGCTTTCTCAAAATTAATACAAAATCGGATGCGGTTAGCATGCCTGTTACGGTTTGCTGCTGATCATCCCAAAGAGGAACCAAAGAAAGACCCTCATCATGCATGATTTTAAAGGCTTGCTTGACAGGAAGACGAGCATCCAAAACTGCTATCTTGCTAGAAACAGGAACAACATCATATATGGTATTATGTAATAATATCTCAGAGACTCGATGGCGGAAAATTGCTATCTGCACGCCTGAGTTTTGAGATAACTGATCTGGGGGCATTGTTGTCAGTATAGTACCCTCATCCATACTCACTACTCTGATGGAAGTTTCTGGCTGTACAACCGGATGTGTATTATCCACAAGAACTTCATTGCTAATCAACCCATATTCATCCCGTACACAAGGTTTCGTCTCATCACATCGCCAGACACCATCAACCAAAAACCGGTACTGATAAACCCCGGGGGGCAGATCGAACACCACCTGGAACTCGGCCCCGACGAGCCCCATGGGGCACTCCCTCCACCCGGTGAAGCTGCCGCAGAAGGAGGCCCGCTGGCCGCCGTACGGCCACGCGAAGCGCCGCAGCACCATGTTTGGAGAAGCCCCCGGGCAACCACCCCCCCCCCCCCCTCAAGAACCCTAGCAAAAGCAAAGCAAAGCAAAACACCTAGGCGTCGACCATCCCAGCAAAGCAAGAACCCCGAACACCCCCCCCCCCCCCCCACGCCCACGGGATTGGGGGACCTGCAGGAGCAGCAGCGAGAGCGAGAGCGAGAAGGACGGTGGTGGTGAATTGAGATTATAAGGAGGCGGAGAATGAGGAAAAGAGGGAAATTTTTTGGCGTGCGTGAGGAGGGAGGCGGAGGCGGAGGCGGAGAAGCAAAGGGGAGGGGGGGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0260700.1 | 4 | 19852148 | T | C |
| Osa04LNT0260700.1 | 4 | 19852240 | G | A |
| Osa04LNT0260700.1 | 4 | 19852831 | G | A |
| Osa04LNT0260700.1 | 4 | 19852854 | T | C |
| Osa04LNT0260700.1 | 4 | 19853012 | G | T |
| Osa04LNT0260700.1 | 4 | 19853220 | A | G |
| Osa04LNT0260700.1 | 4 | 19854311 | A | G |
| Osa04LNT0260700.1 | 4 | 19854436 | T | G |
| Osa04LNT0260700.1 | 4 | 19854693 | T | C |
| Osa04LNT0260700.1 | 4 | 19855638 | T | C |
| Osa04LNT0260700.1 | 4 | 19855647 | C | T |
| Osa04LNT0260700.1 | 4 | 19855825 | T | A |
| Osa04LNT0260700.1 | 4 | 19855866 | C | T |
| Osa04LNT0260700.1 | 4 | 19856585 | T | A |
| Osa04LNT0260700.1 | 4 | 19857880 | T | C |
| Osa04LNT0260700.1 | 4 | 19858771 | T | G |
| Osa04LNT0260700.1 | 4 | 19854516 | T | C |
| Osa04LNT0260700.1 | 4 | 19856731 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0260700.1 | osa-miR5795 | Cleavage | 4.5 | 24.317 | 1 | 22 |
| Osa04LNT0260700.1 | osa-miR5805 | Cleavage | 5.0 | 17.792 | 1 | 24 |
| Osa04LNT0260700.1 | osa-miR5833 | Cleavage | 5.0 | 22.23 | 1 | 21 |
| Osa04LNT0260700.1 | osa-miR5833 | Cleavage | 5.0 | 19.722 | 1 | 21 |
| Osa04LNT0260700.1 | osa-miR319a-3p.2-3p | Cleavage | 5.0 | 23.324 | 1 | 20 |
| Osa04LNT0260700.1 | osa-miR319b | Cleavage | 5.0 | 23.324 | 1 | 20 |
| Osa04LNT0260700.1 | osa-miR166k-3p | Translation | 5.0 | 21.148 | 1 | 21 |
| Osa04LNT0260700.1 | osa-miR166l-3p | Translation | 5.0 | 21.148 | 1 | 21 |
| Osa04LNT0260700.1 | osa-miR1442 | Cleavage | 5.0 | 16.127 | 1 | 20 |
| Osa04LNT0260700.1 | osa-miR531b | Cleavage | 4.0 | 21.695 | 1 | 20 |
| Osa04LNT0260700.1 | osa-miR1428b | Translation | 5.0 | 12.132 | 1 | 21 |
| Osa04LNT0260700.1 | osa-miR1428c | Translation | 5.0 | 12.132 | 1 | 21 |
| Osa04LNT0260700.1 | osa-miR1428d | Translation | 5.0 | 12.132 | 1 | 21 |
| Osa04LNT0260700.1 | osa-miR1320-3p | Translation | 5.0 | 22.189 | 1 | 21 |
| Osa04LNT0260700.1 | osa-miR2103 | Translation | 4.0 | 12.413 | 1 | 22 |
| Osa04LNT0260700.1 | osa-miR2120 | Cleavage | 4.5 | 17.026 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0260700.1 | 4 | qFRP4-1 | Physiological trait | Source activity | RG449 | RG788 |
| Osa04LNT0260700.1 | 4 | An8-glum | Morphological trait | Panicle/flower | nan | nan |
| Osa04LNT0260700.1 | 4 | nan | Morphological trait | Root | RG449 | RG788 |
| Osa04LNT0260700.1 | 4 | qCCFJ-4 | Physiological trait | Source activity | RM261 | RM3785 |
| Osa04LNT0260700.1 | 4 | nan | Morphological trait | Panicle/flower | RG788 | RZ69 |
| Osa04LNT0260700.1 | 4 | gwt4a | Morphological trait | Seed | RG788 | RG190 |
| Osa04LNT0260700.1 | 4 | gwt4a | Morphological trait | Seed | RG788 | RG190 |
| Osa04LNT0260700.1 | 4 | qNOT4-2 | Resistance or Tolerance | Drought tolerance | RG449 | RG788 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)