© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0262100.1
CAGTCACCAACTCTCTATCAGATTTAAAATAGAACCACAAGGTGTGTGTGTACAAAAAAGAATGTATCTTGAACTGAAAACATATTCATAAAATGGAGTATACAGCTAATGTCATTATAGGAAAAAGAATGTTCGGGTCCCTGATAAAATTACATCAAAGGATCATTCACGCAACCAAGAAAAATCATATATTCATCAGCTGGAACAGTGATAACACCAGGAGTCCAGGAGCAGCTGTCACTTTCGCGGCTTCCTTCCCTCATGGCCTTGAAGCTCAAGCAGCCTGCTCTGCAATAGCCACTTTAAAATCAGACTAGCACGCGGCATGGCATCAGACAATACTAGGCATATCTCCAACCCAGCTACAAACTGCCCGTGGCCATCGGGTTCTAATGCAGTCCACCAACGGTGCATGCTGAGAAGTTTGAACAGGTGGAGCAAGTGAAAGAACACTGTCATCCTTGCTCCCGCTGGTGGACGCGCTTACAACATCAGCTAGATACTCATCTTGAGTCCACCTTGGCGGGACACTGACATTTAACTTGCACAGTCTGGGTCTCTGTATTGTTGAACCTCCAATGTTAGCATTCCCATTAAGCACGGACTTCGCGATTCCATTGAAATGGTAGATAGTGAATTGCTTCTTGCCCATAAGGCCTGTAGGATCCTTCATGCCTCCAGCCCTTTTATCCAATTGTAGCAGCGCCTGCCAGAATTCACTCCATACTATAATGCCAGCATTACAGAGGTCCTCAAGCTTATCAGAAGGAAAATTTATGTCAGTGTCCCTCAGAACTTGTTGGAACCCCTCAACGCTAATAAAGCCTCCACCTCCACTTTGATCTTGTGCATCAAATGCCCTCCTTATTTTAGATTCCCGCTCTTCCAGCTCATTCTCTTCTTGAACATTGGGATTTAGGGCAAAAAGGACGGAGTAGTGACTTTCACTTCCTACCACCCATATTGGCCATTTCGGGCACTTTAAGTATTGACCAACCTTGCAGAAGTTTAGTGATTCCAGAAGGGTAAGGAAACCAACTTCAACATCATTTGGTATCCCATTCAGGAACATGCCACCACCAAAGTCCACCTTGCCATCAAATACATTTGACACAGCCTCTCCACATAGCAATAAATTCACAACTTCCTGTGAAGCATGCCCAAATGGGGCAGTGACCAATGGTAGGCTTGGATCATCCCTATCCGCTTGAATACGTTCCAATCCTCGAGAGAGAAGAGCAGATATAAGGAATAGCATGGCTCCTAATCGACTTTCAAACAAAGAAATGTTTGCTATAAGACTGTTGAATGCATCCTTCCTTGAGGTAAATGTACTTATTCTAAGAACTTTCTGCAGATCCATAGCTGAGTCAACAGAAAGGCCTTCCAAGACTGCAGCAGTTTTCGCTTCATTGACACTTCCAATGGTTGCTACAACTGCTCTGTTCCCCGTTCCGCATAAAAATAGAATTTCCAGCATGGCATGAACCAGTGCTCTCATCTTTCTGTCATCAGTCAGAGAAGAAAAATCATCCCTCGCAGCAAAAGAGCTCTGATAAAAGCGCCTTTGTCCCAGGGCATAAAACGGATCACTAACCTCCGGATTACCCAATTCATCAGAGAAAAACAAAAGATATTTAAGAACATAGGCCTGTACTGTAGCTAGGACACCACAAGGGCCACCTTCATGCTGTACCAGTCCCATGGTTGTTTCAGGATCAGAGCTAAATCTGATGCCCTGATTGCTCCACTGCGCCAACACCTCCTTCTCAAGCTTGTTGCCGAACACCATTAGCCACAGCTTCTCGGCCACGTCCGTAGGCAACCG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0262100.1 | 4 | 20853741 | A | G |
| Osa04LNT0262100.1 | 4 | 20854948 | A | G |
| Osa04LNT0262100.1 | 4 | 20855374 | A | T |
| Osa04LNT0262100.1 | 4 | 20855632 | A | G |
| Osa04LNT0262100.1 | 4 | 20856037 | A | G |
| Osa04LNT0262100.1 | 4 | 20856129 | A | G |
| Osa04LNT0262100.1 | 4 | 20856465 | T | C |
| Osa04LNT0262100.1 | 4 | 20856938 | T | C |
| Osa04LNT0262100.1 | 4 | 20857921 | A | G |
| Osa04LNT0262100.1 | 4 | 20857173 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0262100.1 | osa-miR2873c | Cleavage | 2.5 | 17.668 | 1 | 21 |
| Osa04LNT0262100.1 | osa-miR156a | Translation | 4.0 | 16.998 | 1 | 20 |
| Osa04LNT0262100.1 | osa-miR156b-5p | Translation | 4.0 | 16.998 | 1 | 20 |
| Osa04LNT0262100.1 | osa-miR156c-5p | Translation | 4.0 | 16.998 | 1 | 20 |
| Osa04LNT0262100.1 | osa-miR156d | Translation | 4.0 | 16.998 | 1 | 20 |
| Osa04LNT0262100.1 | osa-miR156e | Translation | 4.0 | 16.998 | 1 | 20 |
| Osa04LNT0262100.1 | osa-miR156f-5p | Translation | 4.0 | 16.998 | 1 | 20 |
| Osa04LNT0262100.1 | osa-miR156g-5p | Translation | 4.0 | 16.998 | 1 | 20 |
| Osa04LNT0262100.1 | osa-miR156h-5p | Translation | 4.0 | 16.998 | 1 | 20 |
| Osa04LNT0262100.1 | osa-miR156i | Translation | 4.0 | 16.998 | 1 | 20 |
| Osa04LNT0262100.1 | osa-miR156j-5p | Translation | 4.0 | 16.998 | 1 | 20 |
| Osa04LNT0262100.1 | osa-miR156k | Translation | 3.0 | 16.998 | 1 | 21 |
| Osa04LNT0262100.1 | osa-miR156l-5p | Translation | 5.0 | 16.998 | 1 | 21 |
| Osa04LNT0262100.1 | osa-miR1861e | Cleavage | 4.0 | 12.762 | 1 | 22 |
| Osa04LNT0262100.1 | osa-miR1861g | Cleavage | 3.5 | 12.762 | 1 | 22 |
| Osa04LNT0262100.1 | osa-miR1861k | Cleavage | 4.0 | 12.762 | 1 | 22 |
| Osa04LNT0262100.1 | osa-miR1861m | Cleavage | 4.0 | 12.762 | 1 | 22 |
| Osa04LNT0262100.1 | osa-miR2101-3p | Cleavage | 4.0 | 14.721 | 1 | 22 |
| Osa04LNT0262100.1 | osa-miR5076 | Cleavage | 4.5 | 14.92 | 1 | 22 |
| Osa04LNT0262100.1 | osa-miR5486 | Translation | 5.0 | 13.249 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0262100.1 | 4 | qCCFJ-4 | Physiological trait | Source activity | RM261 | RM3785 |
| Osa04LNT0262100.1 | 4 | nan | Resistance or Tolerance | Other soil stress tolerance | RM5586 | RM3916 |
| Osa04LNT0262100.1 | 4 | orl1 | Morphological trait | Culm/leaf | S10628 | C377 |
| Osa04LNT0262100.1 | 4 | qFRP-4 | Physiological trait | Source activity | RG788 | RZ565 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)