© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0262200.1
GCTTGATACTACTGCATATATCACGTTTTATTCATGTGCAAACATAGCAGAGTAGTATTACATTTTCGTTCAGGTACATACACATACAGAGCATATTACGCACATCACACATCCTCTGAGATGTGTGATCAACCTTGCATATCAGAGACAAACTGATCAACCCATCCTGTAAATAAGAGGGAATACATACGAAATCCTTTTTAGCAAGGACCAACTGTATTCGAGCATATTTAGTACTTCAGCATCAAGAGTACCCTGATTCGCTTTCCTGATAAGCGATAATTATCTAGTAGTCGTCAGAACTGGTCTTGCCTCTTCCGGTTGCGTACTCATCAGTGCTCGACTTGTTGTAGCCACCAGTGTAGTCACCGGCGTCAGACTTGTCGTAGCCACCACCGCTGCCATAGTCGCCGGTGCCGGACTTGTTGTAGCCGCTCTCATAGTTGTCCGTGCTTGATTTGTTGTAGCCGCCGCCGCTGCCATATTCACCGGTGCCGGACTTGTTGTAGCCACTCTCAGAGTTGTCTGTGCTTGATTTGTTGTAGCCACTGCCACCATATCCATCAGTGTTGGAGGCGTTCTTACCACTGTCGTAGTCGCCGGTGCTCGGCTTGCTGTAGCCGCTTCCGCCATAGCCATCATCGTTGCTGCTTGACTTCTTGTAGCCACCATCATAGTCGTCTGAGCTTGATTTCTTGTATTCGTCACCACGACCATAGTCGCCGGTGCTGGAGTCCTTGTACTCGCTGCCATAGTCGCCAGCGCTGGACTAGTTGTAGCCACCACCACTGCCACTGTAGTCATTGTTGCCGGATTTGTTGTAGCCGCCGCTCCCGCTGTAGTTGTCAGTGCCGGATTTGCTGTAGCCACCGCTGCTGCTGTAGTCGTCGGCGCCAGATTTGTTGTAGCCGCCGCCACCACTGTAGTCATCTGTGCCGGATTTGTTGAAGCCGCCAGTTAAGTCGTCGGTGTTGGACTTGTTGTAGCTACCAGTGCTGCCATATTCATCAGTGTTGGTGTTCTTGTAGCCACTCTCATTGTCGTCGTTGCCGGACTCGTTGAAGAGGCCAGTGTCACGACCGTAGTCGTCACCGCTGCGGCCATAATCTCCAGTGTTGGTCTTGTTGTAGCCACCTTCCTCGTCATCAGCACCAGACCTTCTGTAGCTGCTGCGATCATACTCATCTGCCATTCGGAAAACCACTTCTCCTGTCCACATGTTCGAAGTGATTTTTCCCATATTTGTATGTGGGTCCTATATTCGTTAATTGATCATTAGGCACGGACATTACCTTCACTTACTCGGAAGAAGTTAATTGATGTAGGAATGAGCAACTAACAAACACAAAATAATTGCTGCAGGCTTGCAGCTGCATCAAACTGTGGTCATATGGATACTAGAATGAACTGCAACTGATAACCATTCATTTTGCTTACGCACTTGGCAAAATGAAGATAATATTCCACATGACTCAACAGAAATCCATGATTGCTGTCCATTTGTAAGGATCTGAAGCTGTTACAAGTCAACGTCGCTTCCAATAACTTCAGAGAGGGTAATTTCGTCCAATTATATTGAATAAGACACTCTGTTTTATGCATAGCAAGCAGCTGTCACATTGTCTTCCAAGTCCAAAACAATTATTGTTATCACTTGAAGAGCATCTCAGCCTTTATTCTTGAGTAAACTTTTGCACCATTATTTAAATCGAAGATCTTCACAGCCCAATCTGATGATGATTCTTCCAATCTTCCAAGAGTAACAAACAAGAAAGATTTTGATCACCTCGGTGATTCCTTTATGGGATAGGTGTTGTAACTTTAAACTCATCTTCTGCCTTGATAAAGACAATAGAGCACATCAAACATCAGCTCCAGAGATATATCACAGAGAGATCATTGTACATGATTGATACATTCAAGCAGATCTTTAGCACGATTTGCCAAATAATGTTCTGGACCATAGCATATACTTGCAAGGTATTTGCTGTAGGTGATGCAGCAAACAGCTAAGCTCAGAATGCACTCTTTCTGTTGCTCGATGAGAGTTGCTGGCGCATGTTTACCAGAAAGGTTGAAAGAATCTTCCTCAGAAAGCTGGAAAGCCTGAAATATTGCTGGACCAAGCCAACTGAAATCTATGGGGTTCTTTATCTTTTCCAGGCAGGGTAAGCCTTGGGCTAAAAATGGCCAGCACTGCAACGATAAAGATAACAAGGGCTTGCCAAACTTCTCACAAGTTGATCTGAATTGATTGTACCGCACAGAATCATGTTTTGCCGAATTTGTTGAACATGAAGCAAAGCTGAAGATAGCTTCAGGCATGTTTTTCCTTGTTTCTCCCTTAATACATTCAGCAAAATCTAATATGGACTGTCCAGTGCTTAGCAAAAAATGCGACAGAAGGGTCACAAAGGAACATTCAGATAAAAACAAGTGATGTGTAGCCCCTGCAAGAACTATTGAATAAGCTGCTGCAGCTTTGGTCATTCTGAAAATGAAATCACAATTTTCTCCATGCAAATTATCAGTGCTTGATTTGAAGGCACTGCACCGGTATGCAGAGGCAAGTATCATGAAACTGCTGACACTGATATGGTGTAGGGGGTGTAGTATGTATTTCCTTGGTGAAAGTTCCTCTTGCTGCAAATCATTCATCAAGTTTTCTGAAAGCATGCTTTCAATTACATCACAGCAAGCTTTAGAGTCATCAAGGAATGAGTATTCAGATATTGCCTGTTGTAAGTTATTGTCCAAATCCTCAATTGCTGGGTCTGTAACAGCATTATGTGGCGATTTCAAGTTCCTAGCATCACAATTCAGAATAAGATCCACATATGGTTTTGGTAGTGCAGTACAAAGCTCGCAAGAACAAATGAATTTATACTTTGACCACAGATCTGAAAGCCTTGCTTCCCTTGTCTGAAGAAGATCAATGTATGTTATGAAAACTTCATCTCCCTTGTTGATTGGCTTTGTGCAGCGAACAACAACTCGTGGACCATATTTACATTGAGCATGAGCAAAACCAGCTTCTTCATTCTGCCAAGCATGCCACGCATCTGGCGCAGCTCCTTTGCTAACAGGAACTACACATGATTCTGGTTTGTTTGAAGTACACCCTTCATTCTCAACACTATTTGTCATCACTGCCCACAATGCCACCTTCTCTATCGTCAAGCCATTGGAGAGACCAACATAGTTCTTCATCCTCGATTTTCTGGCAGACAACATCAACAAACTCCCCTCCAGCACCCCCTCGGCAATCTCCCCACCCTCCTCCAGAACCTCCCTAATACCACTTGCAGAAAGCCCGCCGATCCTATTGGAGCTGCTGACCGAATCAGATGAAACAAGACCACGCGTCTCAAGCGAATAGAGAAGGCGGAGAGCAGCACGGATATCGCTCGTTTCTTCGGTAAGAGTGGATGGGGAGGCTTCCCTGAGATGTTTCACAAAGAAGCAACATTCACCAGAAGATGAATGCACTTCACAGTCCGAGATCAAGCAGTCCGAGCAGCAATATCGAACAGAACCGCACATCGTGCAAGACATGTCGTGGGGGGATTGAGCCGGTATGCGGTGGAAGCATGACGAACAGTGGGACTGGAGCGACGCATCGTGCAGGGCAGTAGCATAAGGCGCAATGGCCTGAGTTAGGTCCTCCGACATGTTCACAGATTCCCGGGCTCTCATCCCCATTGCCATTTTGTCAGGTCCTCCTTGAAGCCGCGTCCCCGCAGCAGGGTCGTAGGACGGGGCGGCGGCACCGCAACCGCGCCAGAAGAGAGGGGAGCGAGGCGGCGGCGGCGTGCGTGCCGGCAACGGAGACGACGAGACGAGAGGGGGGTGTGCTTTGGCTTGCCTGGGCTGGGTGGCTGGGCCCTAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0262200.1 | 4 | 20941308 | C | A |
| Osa04LNT0262200.1 | 4 | 20943217 | C | T |
| Osa04LNT0262200.1 | 4 | 20944854 | T | C |
| Osa04LNT0262200.1 | 4 | 20944892 | T | A |
| Osa04LNT0262200.1 | 4 | 20944920 | T | A |
| Osa04LNT0262200.1 | 4 | 20945158 | A | G |
| Osa04LNT0262200.1 | 4 | 20945967 | A | T |
| Osa04LNT0262200.1 | 4 | 20946025 | C | G |
| Osa04LNT0262200.1 | 4 | 20946349 | A | G |
| Osa04LNT0262200.1 | 4 | 20947628 | T | C |
| Osa04LNT0262200.1 | 4 | 20948382 | T | G |
| Osa04LNT0262200.1 | 4 | 20942017 | A | G |
| Osa04LNT0262200.1 | 4 | 20941575 | T | C |
| Osa04LNT0262200.1 | 4 | 20943159 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0262200.1 | osa-miR5534a | Cleavage | 5.0 | 19.022 | 1 | 21 |
| Osa04LNT0262200.1 | osa-miR812t | Translation | 4.5 | 17.383 | 1 | 24 |
| Osa04LNT0262200.1 | osa-miR812u | Translation | 4.5 | 17.383 | 1 | 24 |
| Osa04LNT0262200.1 | osa-miR5824 | Cleavage | 5.0 | 18.362 | 1 | 24 |
| Osa04LNT0262200.1 | osa-miR160a-3p | Cleavage | 5.0 | 23.856 | 1 | 21 |
| Osa04LNT0262200.1 | osa-miR160b-3p | Cleavage | 5.0 | 23.856 | 1 | 21 |
| Osa04LNT0262200.1 | osa-miR395b | Cleavage | 4.5 | 22.457 | 1 | 21 |
| Osa04LNT0262200.1 | osa-miR395d | Cleavage | 4.5 | 22.457 | 1 | 21 |
| Osa04LNT0262200.1 | osa-miR395e | Cleavage | 4.5 | 22.457 | 1 | 21 |
| Osa04LNT0262200.1 | osa-miR395g | Cleavage | 4.5 | 22.457 | 1 | 21 |
| Osa04LNT0262200.1 | osa-miR395h | Cleavage | 4.5 | 22.457 | 1 | 21 |
| Osa04LNT0262200.1 | osa-miR395i | Cleavage | 4.5 | 22.457 | 1 | 21 |
| Osa04LNT0262200.1 | osa-miR395j | Cleavage | 4.5 | 22.457 | 1 | 21 |
| Osa04LNT0262200.1 | osa-miR395k | Cleavage | 4.5 | 22.457 | 1 | 21 |
| Osa04LNT0262200.1 | osa-miR395l | Cleavage | 4.5 | 22.457 | 1 | 21 |
| Osa04LNT0262200.1 | osa-miR395s | Cleavage | 4.5 | 22.457 | 1 | 21 |
| Osa04LNT0262200.1 | osa-miR395u | Cleavage | 4.0 | 22.457 | 1 | 21 |
| Osa04LNT0262200.1 | osa-miR169p | Translation | 5.0 | 17.259 | 1 | 22 |
| Osa04LNT0262200.1 | osa-miR408-5p | Cleavage | 5.0 | 17.159 | 1 | 21 |
| Osa04LNT0262200.1 | osa-miR395m | Cleavage | 4.5 | 22.457 | 1 | 21 |
| Osa04LNT0262200.1 | osa-miR395n | Cleavage | 4.5 | 22.457 | 1 | 21 |
| Osa04LNT0262200.1 | osa-miR395p | Cleavage | 4.5 | 22.457 | 1 | 21 |
| Osa04LNT0262200.1 | osa-miR395q | Cleavage | 4.5 | 22.457 | 1 | 21 |
| Osa04LNT0262200.1 | osa-miR395r | Cleavage | 4.5 | 22.457 | 1 | 21 |
| Osa04LNT0262200.1 | osa-miR1850.2 | Cleavage | 4.0 | 15.405 | 1 | 21 |
| Osa04LNT0262200.1 | osa-miR1856 | Cleavage | 4.5 | 13.546 | 1 | 21 |
| Osa04LNT0262200.1 | osa-miR2099-3p | Cleavage | 5.0 | 17.582 | 1 | 20 |
| Osa04LNT0262200.1 | osa-miR2871a-3p | Translation | 5.0 | 17.557 | 1 | 21 |
| Osa04LNT0262200.1 | osa-miR2871b | Translation | 5.0 | 17.557 | 1 | 21 |
| Osa04LNT0262200.1 | osa-miR2918 | Translation | 4.0 | 21.173 | 1 | 21 |
| Osa04LNT0262200.1 | osa-miR395y | Cleavage | 4.5 | 22.457 | 1 | 21 |
| Osa04LNT0262200.1 | osa-miR812n-3p | Translation | 4.5 | 17.383 | 1 | 24 |
| Osa04LNT0262200.1 | osa-miR5504 | Cleavage | 4.5 | 19.59 | 1 | 21 |
| Osa04LNT0262200.1 | osa-miR5504 | Translation | 5.0 | 11.413 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0262200.1 | 4 | orl1 | Morphological trait | Culm/leaf | S10628 | C377 |
| Osa04LNT0262200.1 | 4 | qFRP-4 | Physiological trait | Source activity | RG788 | RZ565 |
| Osa04LNT0262200.1 | 4 | qCCFJ-4 | Physiological trait | Source activity | RM261 | RM3785 |
| Osa04LNT0262200.1 | 4 | nan | Resistance or Tolerance | Other soil stress tolerance | RM5586 | RM3916 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)