© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0262400.1
GGAGCAGCTTGTAAGATTTATATACAGCAACAACCTTAAAAGGGAATTACACCTGATGCACTACGTTTCATGCAGCAAAAGATTAAACAGAAGAGGAAAATCCTAATAAGTTTTTCTAAGCTAGAATGAGCACTACTAAATAGTCTACATGCTTCAGCAAGATGTTATATGTATTATATCTCTTATCAACATTGGGGTCTACAAATTCTGTAAGCGGGCAATCAGCAGGTGATAATTAAGGATATCCAAGCAATTCTTCCAGAGTTACAGCATATTCTTGAGCTATTTCCTTGATCAACTCCTATGCACTACTGTAGTCGAAGGAAAATGAGATGACATGAAAAGCGATTCAATAGGATATCATTAACACTAATCCATTCAATGTTGAAGGAATCCAAATCTATTGTGTCCTTCACTCCACTTAGACCACTTGCTATGCACGAGTGCTCAGTGCTCACTGTTCAGCATGAAAACATTGAAAATTCATGGCCATCTTGTTGCTATTGTGCTACCAAAATCATTGCAGGTCAGCATTACTGGCCACCATTCCTGTAGATGATCATCCTCATATCAAAGCCATCTGCCACCAACTTGGACCTTCGAGCTCATCATGTATGATCAGTTGCTCAACTTGGCAGCCATGTTGCTTCTGGGAGTCCTACCACCTTCTGTCCAGAGTCCCACTTAGTATTCAGTCATTGCATGAACCAGCATTCTCCAGGCTCAGTAGCAGTCTAGCAGCGCAGGACGGTAGGAGCACTGATGAGCAGATCCCAAATACCAGCTCTGACCAAATTGCGAGCTTCAGTAACAAGGTATATCTTTTGTTCTCTTCTACTTGTGAGGAAGGGGAACAGCTCAGAATATGAGATGATACCAAGATTTCGACTCATCAGTCTGCAGCTAAAAATCCATCAAGTCATTCTACCTGAAAAGCCTTCACGCCAACATCACAGTATATCTAGTGATGACAATGGCAATTCACCCAGGGACTAGAACGGCCATCAATCACATATGCCAGCTATATTAACTATAGTTGGTTCTCTCTGCTATCAAAGGGTTCTACAACCAGTATTACCTCCAACAAGTAAAGTAATTCACTAAGATATACTCTCTGCAGGGTCTACAGCCACAAACGTCTAACCCACCATGCTGACTTAGCCAGAAAAGAGAAAAACAAGCACCATGGGTTCCAAGCATTGCCTGACTTACATCATTTACAAGTGGAATGGGATCCATGCTTTACCTGAGTATCAGCGCTTGCTGCCTGAGTGCTAGTACATGCTTGCGGGTTGCCACTATCATCCTGATATACTCATATGCAATACTAGGATCCCCCCTGCATAAGTACCGTGGAATAGTGCAGATCCATGTAGAAGCGCTGGGTTCAGAAGCAGCTCACCAGATCGCATGGGTTCCTGAGCTGACCCGAAGGTAGTATTTCAGAAGCACAAATCCTGGTGCAAAAAAGGCTAACAAATATAACCTGAGCAGAAGCAACAAGTACACAAGATTGGGCAGAATAGCTCTCTTAGAATTCTCCATTTAATTTTCATCTTTCAAAAACTTCATCTCTTATTCTCAACAAATGCATCCTCCTGTTTTCAATCTCTTAGAAAACCGACATGGAGTTTCATATATAGAACCTATCTGATTGATTACCATGGGTTTATTTTGCCAGTTGATTCCAGAGATACCGCAGAGGCACAGATTAACGAGAAAAAAAATGTGGAATTAATAACCACAAAGTTTAATAGTGCATACCTTGTAAAGCTACTTGAAAGAGAAGTGACATACCATATGAGAAGAAAAACCTTCAGCTGATTAGCTGCATCTTCAATACTTTCTGCAATACTCAGTAGTGATTAATCAAGACATCAAGTATACTGGTACAGTGGAATATAAATCTGAACCAGAACACACTATGAAGTATCTAGCCGAATTGATCATTGCTCTGAGTCTGAGATAGATTTCTCAATGGCTCTCACATAAACAGCCTTCGGAAGAGTCCCAGTAATGCTATGCGTTTTCTCTCCATCCTTAAAGAGTAAAACAGTTGGAATCCTCTCGATGCTGTAAGATGTTGCGACTTGTGGGTAATCATCAGTGTCAAGCTTATAGCATTTTATCCTTCCAGCATATTCTTGTGCAATCTCATCAACAATTCGGTGGACCATTCTGCAGGGTCCACACCATGAGGCCCAAAACTCAATAAGCACAGGTATATCACTGCAGATCACATATTCATTCCAAGAACATGCCGTAATTGTTTTGGCTCCGCGAGGAGAATACGCGCAGCTCACCGTGCGGATCCGGTGCGCCGCCCAGCGGCGCCGGCAGCCCGGCCACCGGCGTGCGGCGGAGGAGGAGGCGCCGTACCCGGCCCTCCGTCGGCCGGGCGCCGCGAGCGCCACGCCGCGGTAGAGGCTCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0262400.1 | 4 | 21362130 | C | T |
| Osa04LNT0262400.1 | 4 | 21362183 | T | C |
| Osa04LNT0262400.1 | 4 | 21361627 | T | G |
| Osa04LNT0262400.1 | 4 | 21361674 | A | T |
| Osa04LNT0262400.1 | 4 | 21362018 | A | C |
| Osa04LNT0262400.1 | 4 | 21361822 | T | G |
| Osa04LNT0262400.1 | 4 | 21364297 | C | T |
| Osa04LNT0262400.1 | 4 | 21364442 | T | C |
| Osa04LNT0262400.1 | 4 | 21364672 | A | G |
| Osa04LNT0262400.1 | 4 | 21364734 | A | G |
| Osa04LNT0262400.1 | 4 | 21364994 | A | C |
| Osa04LNT0262400.1 | 4 | 21364443 | A | G |
| Osa04LNT0262400.1 | 4 | 21364822 | T | C |
| Osa04LNT0262400.1 | 4 | 21362199 | A | T |
| Osa04LNT0262400.1 | 4 | 21362337 | A | T |
| Osa04LNT0262400.1 | 4 | 21362508 | A | T |
| Osa04LNT0262400.1 | 4 | 21362520 | A | G |
| Osa04LNT0262400.1 | 4 | 21362595 | A | C |
| Osa04LNT0262400.1 | 4 | 21362681 | G | T |
| Osa04LNT0262400.1 | 4 | 21362911 | T | G |
| Osa04LNT0262400.1 | 4 | 21362932 | T | C |
| Osa04LNT0262400.1 | 4 | 21363255 | T | C |
| Osa04LNT0262400.1 | 4 | 21363541 | A | G |
| Osa04LNT0262400.1 | 4 | 21363554 | T | A |
| Osa04LNT0262400.1 | 4 | 21363786 | T | C |
| Osa04LNT0262400.1 | 4 | 21364025 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0262400.1 | osa-miR6256 | Translation | 4.0 | 10.592 | 1 | 22 |
| Osa04LNT0262400.1 | osa-miR395o | Cleavage | 4.0 | 3.982 | 1 | 21 |
| Osa04LNT0262400.1 | osa-miR1870-3p | Cleavage | 4.0 | 10.377 | 1 | 24 |
| Osa04LNT0262400.1 | osa-miR2275a | Cleavage | 4.0 | 16.996 | 1 | 22 |
| Osa04LNT0262400.1 | osa-miR2275b | Cleavage | 4.0 | 16.996 | 1 | 22 |
| Osa04LNT0262400.1 | osa-miR1871 | Cleavage | 4.5 | 8.269 | 1 | 24 |
| Osa04LNT0262400.1 | osa-miR5498 | Cleavage | 4.0 | 14.533 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0262400.1 | 4 | orl1 | Morphological trait | Culm/leaf | S10628 | C377 |
| Osa04LNT0262400.1 | 4 | qFRP-4 | Physiological trait | Source activity | RG788 | RZ565 |
| Osa04LNT0262400.1 | 4 | qCCFJ-4 | Physiological trait | Source activity | RM261 | RM3785 |
| Osa04LNT0262400.1 | 4 | nan | Resistance or Tolerance | Other soil stress tolerance | RM5586 | RM3916 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)