© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0262900.1
GACTCTTTTTCTATGAATCACCAGCCTTTTATTGCATCTTCCCCTTCGTACAACATGTGACAACCGAATGGCTGCAACAATGAAATTATAGAACCCTCTCTGTAACGACCAAATAATCGGAGAGAAAAAAAAAAGGCTCCTCATTTCTACTACCTACTTGACTGATGTACATGTACAGAGCGCAACGCATGCCCACGTCGCCACCACAAGTTTTAGGACAACAGCAAGAAGCCTAGCTTCCATTTACAACCTACAAACAATGCCCACATCAAACAATCGGACAGGTCACAGGCGTCGTCTGGTGTTTTGCTCTTGTCGGCTGCTGTGCAGTGCGGTGCAGTGCAGTGCAGTGCAGTGCTATTCTTGTTGTGCCTTGTCAAGATCAGATTTGGTTAGAGGTGAGGTGGACTGCTCTTTGTCTTTGTCTTTTGCATTTGCCGGCCGGTTACTCTGGTTGACAAGGTGGTGAAGCCAGACAACCAGGTCCAGAATGTAGTCCTCGGTCTTCGCCTTGTCCGCATGGTAGAGCGTCTCGACCACGTCCGGTTGGCCTGGCCTCCTTCCAACCCTCTCAGTCCCTGATCTCGCCCATTCGCTAAACCGCAAGAAGCCTCGGGCACACGTGGTATTGATGGCCATTGGAACAAGCCATTTCAATGTTTTATCCATTGTAGCCCTAATTTGATCAATATTGAGCTCCTGAGGCACTGACGAAGTTCTTAATCTATTAGGTAGTGCCGATCTCACTCTTGGTGGCAATCCTTGGTAGAGAGCATCTCTTGTATTTGGTGGTATATATCCTGATCGAGAAACCTTAAACAGACAAAATTTAGTAAAATAGCTACATGCAAATACTAGCTAGTGGGCTTTGCTGAAAATACCAATTACGCTCTTTGGTGCTCTGCCACTCTTATGTTAAGTGGGTACAATATACATATGCTAAACCTACAGACAAATGTGTAGTAGTTTCCAATTGATCTATGATAAGATAGCCAAATCATGCCAAATCTTGGGCAGACGTCGCAGGCAAAATCTGAGGGAACTTACAACGCTATAGATCTGTATGATAATATTTGCATAGTGTAATGCAAGTCCGGCAGGTCCTAGTCTCTGACAGTCTTCAGTAGATTCAGAACTCAATTCACCTTCATCAGAAGATCCAAAAGAAGCGTTGATCTCAAAATGCAAGTACTGCACGATGTCTACAAGCTTCTCAACAATATCTTCCAATGTCTTGGACCACAAAGATCTTTTCTTCAAGCTTTTCACATAGTTCCTTTGACTCTTCAATTCTATTCTCACGACCTCAATATTTTCTCCTGGAAGATTATCTTTCTGATATGAATTTCCCTTTACCGTCAGCTTGCAGCGATAATCTTGCTCAAATCTATCCAACGCATGCAGCTCGTGATACAAATCAGTTGTACGATGAACAAGATCCATCAACTTTTGCATCTCTGCAACTGCTGTTTCTTTTAGCTGCTTCTGTGGTGGATTTTCCGATTCTAGCTTGACAAAATAGCGGTCCAGGTTATGCCATTGGGGATCTTTACAACGGTTGCCAAATCTGACAATCTCTTGTGAAAATATTTTCAGCTCTTCCCTTTTGTCATTGGCTACAATCCGCATCAACACACTCATGTCACTGGAAATTAAATTCTGCACGCCTTCAGAAGGAAGCACCACTTGTTTGAAGTATGTAACAGTGTCTTCCGAAAGAGATTGCATAATAGTAGCACCTTTCAATATCGTGTTTGCAACCTCAAAAGCAAGAATTGATATCGGACATCCTTTGGTTTTAGCCCTGGAAATAAAGCCGCCATCTGTGCTAAGGCTTGTTGTTACCAAGCAGCCTATAGTGTCTAAAATATCAACTGCCTTCCCAAATCCAGCCATGCCGGCTGTTCCAAGCACTCTTAGTCTGGGAACCCTGCTTGATCCATTGCTTCCAGGCCTGTCTGTTGTCGACTCGGGCAATCCCTGTTTCCCAGGCAAATCTATATCTTCTGATGCGGAAATTCCCAGCTTACTGCTCCCGGAAAGAAGAAAATCATCACTATTGGAGAAGAGATTGGATTGACTATCCAATTCCAGCTTCCCCAGCATGGCTTCCTCGGCACCAGTGACCATCTGTTTGTGTGCAGCGGCGCTCATCGCGTCGGGGAATCCGCTGATGCCATCCGCACCATCATCCACGGACCACGCATCGGCGACACCAACGAGCCTTCTTGATTTCAGCATGTAGCAATCCATCCGCAAGCTGAGGCCCGTGCCCGCAAGGACGGCATGAAAGGGTGGCTCCCAACAAACCCAATTAACGCCGCCACCCAACAACCGCCCCCCCGCTCGGCCGCTCCCCTCCCCAGCCCACAACAGCTCGAGCCGCACGGAAGGTGCTCGACGAAATGCTCCCCTCCCCCAACAAGAAGTCAAGAACACGAAATGGGGACGCAGTCACACAATCCGGCCAAAGAACAACTAGAAACCTCAGCAAGCGCAGCAGCTAACCAACCCAACCAGCAGAAACCCAAAAAAATCTCTCACGCAGCAGACGCGCCCACCAAGAACGGGGAGAAAAACACACCACAGCGGAAAAGAAAAAACGAAACCGATTTCTCCGACGCGGGATGAGCAGGCGACGCGAGGAGGAGAGTAGCCGCGCTTGTAGCTTGCTTGAGGATGGAGATCGGGAGGGGAATGGAGTGGATCAATCGGTCGCCCGCCCCAGCTGCGGATGGAGATGGGAGCGATCGATTTCTTTTTCAGCTCTACTTTTTCTTTCTTTCTTTTTTTTTTCCTGGGAGCCA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0262900.1 | 4 | 21539911 | C | T |
| Osa04LNT0262900.1 | 4 | 21539668 | A | T |
| Osa04LNT0262900.1 | 4 | 21539733 | A | T |
| Osa04LNT0262900.1 | 4 | 21539737 | G | A |
| Osa04LNT0262900.1 | 4 | 21540110 | A | G |
| Osa04LNT0262900.1 | 4 | 21540661 | C | G |
| Osa04LNT0262900.1 | 4 | 21541783 | A | G |
| Osa04LNT0262900.1 | 4 | 21542413 | A | T |
| Osa04LNT0262900.1 | 4 | 21542533 | G | A |
| Osa04LNT0262900.1 | 4 | 21539457 | T | G |
| Osa04LNT0262900.1 | 4 | 21540718 | C | T |
| Osa04LNT0262900.1 | 4 | 21541967 | T | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0262900.1 | osa-miR5542 | Cleavage | 5.0 | 19.047 | 1 | 21 |
| Osa04LNT0262900.1 | osa-miR5806 | Cleavage | 5.0 | 19.016 | 1 | 21 |
| Osa04LNT0262900.1 | osa-miR6245 | Translation | 3.5 | 20.927 | 1 | 21 |
| Osa04LNT0262900.1 | osa-miR395c | Cleavage | 4.5 | 10.63 | 1 | 21 |
| Osa04LNT0262900.1 | osa-miR395u | Cleavage | 4.0 | 10.63 | 1 | 21 |
| Osa04LNT0262900.1 | osa-miR535-5p | Translation | 5.0 | 18.393 | 1 | 21 |
| Osa04LNT0262900.1 | osa-miR535-5p | Translation | 5.0 | 20.672 | 1 | 21 |
| Osa04LNT0262900.1 | osa-miR529b | Cleavage | 4.5 | 24.212 | 1 | 21 |
| Osa04LNT0262900.1 | osa-miR1432-5p | Translation | 4.0 | 17.935 | 1 | 21 |
| Osa04LNT0262900.1 | osa-miR1849 | Translation | 4.5 | 15.592 | 1 | 21 |
| Osa04LNT0262900.1 | osa-miR1858a | Translation | 4.5 | 21.209 | 1 | 21 |
| Osa04LNT0262900.1 | osa-miR1858b | Translation | 4.5 | 21.209 | 1 | 21 |
| Osa04LNT0262900.1 | osa-miR5339 | Translation | 5.0 | 11.348 | 1 | 21 |
| Osa04LNT0262900.1 | osa-miR395t | Cleavage | 4.5 | 10.63 | 1 | 21 |
| Osa04LNT0262900.1 | osa-miR2098-3p | Cleavage | 4.5 | 22.181 | 1 | 20 |
| Osa04LNT0262900.1 | osa-miR395a | Cleavage | 4.5 | 10.63 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0262900.1 | 4 | orl1 | Morphological trait | Culm/leaf | S10628 | C377 |
| Osa04LNT0262900.1 | 4 | qFRP-4 | Physiological trait | Source activity | RG788 | RZ565 |
| Osa04LNT0262900.1 | 4 | qCCFJ-4 | Physiological trait | Source activity | RM261 | RM3785 |
| Osa04LNT0262900.1 | 4 | nan | Resistance or Tolerance | Other soil stress tolerance | RM5586 | RM3916 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)