© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0263000.1
CCCGCATTCAATAAAGTACAGCGTCAGGTATATATATGCATACGCTATTTAAACATCAAATAAACACCAAGACGACTACTAGTACTAGTACTAAACTGCAGCTTTGCTACAGGCTACAACTACGAGTGTACGCGAAAAAAAACCACGGTACAGTCCGTTCGGCTGTCTCCACAAGGAGATGTACGGCTTGGCTACACGCCTTGGGCGTCAATCGTACCTAAGTCCCTAAGTAAATACAGTAACCGTGCTACGATCTTCCTAAGTCAAATGAAGCTGTACAAGAAGGGGGCAGCATACTGCGGATTAGCACCAGGGCTGACAGTCAGAAGGCATAACCACATTCCACTTCCATGAGATTGCTTAAACTCCGTTGTACTAGAATCGTCAGTGCTGCTTCGGCTGCTGGAGTATTGTGTGGTGTGGTGTGAATGGATCAACGTCAGCTGATGAATTGGAGGGCAACTGCAAAGCTGTGACCTCGCCCTGCTATAGCACCTGATTTGCCATCTTTTCTTGGCAAATCTTTGACAACGCTTCTACATGAAAATTTTGTAACTCTTCCAGGACTTTGACATCTAAGCCTCTTAGATCCTCGCCCTTCAATCTGGAAACAATGCCTTCCAACTCTTTGCAGCGCCTTCTTTGAACATTGTATGCCGCTTTTGCTTCTTCATAAGTGCTGACACTGACACCATCCCAGTTCCTATTATCTGAAGCTTCCATTCCACTCATCATCCTGCCAGTATCACTCTTCGATGAATGATAGCCATTTTGTGTTGCCTTGAATTGGAACAAGTCCTCCTGAGAATTTTCTTTCTTTAACTCTGCAACAAGCATCCACATGTTTGCCAGTTCATTTTCCAAATCATGCTCATGGCATTTTGCATCTTCAATAACCTTTAGAAGTTCACTCTCTCTTCGGGCCCTTTGGGACAATGTGTCCTCTAACACAGCCTCCCTCTGACAGCTAGCAACCAACTCTTTCTGCAGCTCCTCTACAAAGATTCCATTCTCCTGATCACGGCGTTTTGTGTCACTCTGGATACTGCTCCTTGTTTGATCTTTTGCTGCAGCTAAATCTGCATTCAGCTTTGCATTTTCATAAGAAAGCCTCGTAACTTCTTCTGCCAAGTTCTTTAGTTCAACTGCAGCGGCAGCTGCCAATTCTTTAGCATAGGATGATTCTTCAGCCAGCTTTTGACTGTGAATTTCCAGCCCATCTTTCTCTTCTGCCAACCTCAGCTTGTCTAGCTTCAAATTCTCGATTTCTGCAGCCTGCAAGAGCACTTGAGATTTCAGTGGTGACTCCGTATGATCTTCAGTTGTTCTAGAGGGCATTTTTGAATGACTTGCAACTTCATTTGCCAGATCCCTAGGATTGCTGCTTGTACTTGATGGCTCACTTGACTGCATACTAGCCACATTATCCTCGTTTTTGGCAGTCTTCAACAGATTATCAATTTCTTGCCTCAGTTGAGCAACTGTTTCTACGAGTTCTGCATTTTCTGATACCTTTGCTTGTAGCTGGTCCTGAAGAATTCTATTATCTGCAGACATGATCTCCAACTCAAATGTCTTCTCGCTCAATTGTGTGCTTAACTTTGAAAAGGTCTGGGACATTTCAGTCCTAATAGCTGGGTCTTCGGTAGTTTCCAATGATTGCGCCATACGCTGCTCCAGCACACGTATATGCGATTTCTTTTCGTCAATTTCATTTTTCAATTTTTCAATTTGTTCCTGAATTTGTGAATCATCAGGATTGTTTGCAGCTTGCTCTGACAACCTTTTGAGTGAGCTTGTACAAAGTGCAACTTCCCCAGCCAGCATTTTAACCTGCTCTTGAAGAAGATCAATTTGATCCACGATAGTTGTTCCACTCGGAAGATGGTGCCGTGCTCTAGATGCAGCACTAAATAAATCACCTGCTTGAGTCCTCCCTGGAAAAGAATCAGTAAGTGCTGGGTCATCTCCTTTCCTAGTCATAGATTTTCTTCGACCATCCTTCAGGTCAAGAAGCGGGTGTTTTTGTTGCGATGATCTAGAAAAGGAAGGTGAGCCGCTGGCTGTGCTTTCACTGTCTACACTAGTCGACAGTCCTGACAGTTGATCTGACTTCTTTAGTTTGAACCAACCAAGCATTCCCCGTCTGCGATTCCTTCTATCAAACCTCAGTGACTCATCAGGATTGTTAGAATCAAGTTTTCCTTCAACAGAAAACTCTGAATCGAGACTAACATCATCATCCTCCATGGAGTACTCCCGCTTCCGATCAGGCAAATAAGCAAGCTCATCTTCCCCAAATGAATGCCGTCGACGGAGGCTAGCCTTTCCTGAAACATTTGAGGATATGGAACTTTTCGTTGATACCAATATCAATTTTGTTAACCTCTGAATTCTACCCATCAATGCAGCTTTTGCTTCTTCCTCCTCTTCTAGCCTTGACTGGAGTTTCACTTGACCAGCTTCAAGCTGCAGTTTTAAGCTAACAAGATCCTCTTGATCTGTTGGAGGAATGTACCCATTACCCATCATACCACGTCTTAGTTGCTGCAGCTCTTCTTTCAAGCAGGTTATCTCTTTTTGATACTTCTTTATCAAAGACTTCTCATCAATTATCTTATTTTGAGAAGCCTTTATTTCTATATGCTTGCTCCTGTGGGCAAATTTTAATGTATTATGTGTCTCTTCACTGTTGCTGGAAGCAGGGGTAACTGTGCAAATAAGAGAAATGCGCCCATGCCCACTAAGAGAGGACTGAAGTAAGCGTGTGAGCTTTGAGTCTCTATAAGGAATATGGGTAGCCTTACCATCTGTAAGTTTAGCAATTACAGTTCCAAGGGTGAGCAGACTTTTGTTTATGTATGAACCTTCTTTGCGTCGTAATCCAGTTGTTTCAGTCTTGGAACTCTCAGACCCAGCAAGATCAATCAAATTCAACTGAGACAATTTGACTTCTCCTTCATCATTCTCACCAGAGGGGCTACTCTCAATAGTCAATGTGAAGATAGTATGGCTCCGACTGCTGACAAGATTGAAGTTGTTTGAGCCAACATGTCTATGCTCTTCGCCAGATGCTATTAGAGAGAGTGCATGTGCAGGTGATAAAACAACCTCTTCTTTTATCCCTTCCACATAAGTTCCCTGTGCATCTTCTCGAATTCTGAGATTTTGTCCAATTGGATCAAGTAAATCGTTGATAACCTCATTGTATATTTCAAGATATGAAACTCGTAGAAGAAATTCTCGTCCAGGTGTATCTTGAATAATGCTGAAAACATCCTTCACTGCCAATGGGATAATTCCAGGTGATTTTTGTTCCCCATGCATGGTGTGAGTTTTACCGCTACTAGTTACACCATACGCAAAAACAGTGCCATTGATTCCTTCCATAGCACCACTTACAACATGCTGAGCAGCAATATCATATACATGACGAGTAGTAGTAGCAGGGCCAAAAACTTTATCAAAAGCATAGGCGATACTCGGATTGTACTCGTTGCGCACCATGTTGTCGCCGTTGGCGTACCACGCCACCTCGTCCCCCTTGTTGATCTCTCTAGGACTGAGGGGCCGGAAGCGGACGGTGACCATGATGTTCTCCTTGGCATTGGCCGCGTCCACCGCCGCGACGGGCGGCGCCCTCCCGGCCGCCCTCGAGGAGGCCGACGAGGGCGTCGTCGGCCTCCCGGAGGACGGGGTGGTGGACCGCGCGAACGCCGCGGAGGGGGTGGTGGGCCGGCCACCGGCGGACGACGACGACGGGGTAGTGGGCCGGCCACCGCCGGCGGCGGAGGAGGAGGAGGAAGGCGTCGAGGGTCGCCCCCCCGACG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0263000.1 | 4 | 21610870 | G | T |
| Osa04LNT0263000.1 | 4 | 21610688 | C | T |
| Osa04LNT0263000.1 | 4 | 21614307 | G | A |
| Osa04LNT0263000.1 | 4 | 21609546 | T | C |
| Osa04LNT0263000.1 | 4 | 21609680 | G | A |
| Osa04LNT0263000.1 | 4 | 21610862 | A | C |
| Osa04LNT0263000.1 | 4 | 21611486 | G | A |
| Osa04LNT0263000.1 | 4 | 21612655 | A | G |
| Osa04LNT0263000.1 | 4 | 21612944 | A | C |
| Osa04LNT0263000.1 | 4 | 21614311 | T | A |
| Osa04LNT0263000.1 | 4 | 21615193 | A | G |
| Osa04LNT0263000.1 | 4 | 21616428 | A | C |
| Osa04LNT0263000.1 | 4 | 21610665 | C | G |
| Osa04LNT0263000.1 | 4 | 21617367 | A | T |
| Osa04LNT0263000.1 | 4 | 21617692 | A | G |
| Osa04LNT0263000.1 | 4 | 21618046 | T | A |
| Osa04LNT0263000.1 | 4 | 21618567 | A | T |
| Osa04LNT0263000.1 | 4 | 21619975 | C | T |
| Osa04LNT0263000.1 | 4 | 21620094 | T | C |
| Osa04LNT0263000.1 | 4 | 21613019 | C | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0263000.1 | osa-miR5804 | Cleavage | 4.5 | 18.571 | 1 | 21 |
| Osa04LNT0263000.1 | osa-miR5804 | Translation | 5.0 | 15.885 | 1 | 21 |
| Osa04LNT0263000.1 | osa-miR5818 | Translation | 4.5 | 17.7 | 1 | 21 |
| Osa04LNT0263000.1 | osa-miR156k | Cleavage | 5.0 | 12.108 | 1 | 21 |
| Osa04LNT0263000.1 | osa-miR319a-3p.2-3p | Cleavage | 4.5 | 19.355 | 1 | 20 |
| Osa04LNT0263000.1 | osa-miR319b | Cleavage | 4.5 | 19.355 | 1 | 20 |
| Osa04LNT0263000.1 | osa-miR396e-3p | Cleavage | 4.5 | 13.175 | 1 | 24 |
| Osa04LNT0263000.1 | osa-miR395v | Cleavage | 5.0 | 14.565 | 1 | 21 |
| Osa04LNT0263000.1 | osa-miR810b.2 | Cleavage | 5.0 | 18.742 | 1 | 21 |
| Osa04LNT0263000.1 | osa-miR1858a | Translation | 4.0 | 11.751 | 1 | 21 |
| Osa04LNT0263000.1 | osa-miR1858b | Translation | 4.0 | 11.751 | 1 | 21 |
| Osa04LNT0263000.1 | osa-miR2863a | Cleavage | 4.5 | 17.174 | 1 | 21 |
| Osa04LNT0263000.1 | osa-miR5147 | Cleavage | 4.0 | 13.726 | 1 | 21 |
| Osa04LNT0263000.1 | osa-miR5149 | Cleavage | 5.0 | 12.016 | 1 | 22 |
| Osa04LNT0263000.1 | osa-miR5149 | Cleavage | 5.0 | 17.317 | 1 | 22 |
| Osa04LNT0263000.1 | osa-miR5500 | Cleavage | 5.0 | 19.256 | 1 | 22 |
| Osa04LNT0263000.1 | osa-miR5508 | Translation | 4.0 | 23.008 | 1 | 21 |
| Osa04LNT0263000.1 | osa-miR5511 | Translation | 5.0 | 22.43 | 1 | 21 |
| Osa04LNT0263000.1 | osa-miR5489 | Translation | 5.0 | 18.358 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0263000.1 | 4 | qCCFJ-4 | Physiological trait | Source activity | RM261 | RM3785 |
| Osa04LNT0263000.1 | 4 | nan | Resistance or Tolerance | Other soil stress tolerance | RM5586 | RM3916 |
| Osa04LNT0263000.1 | 4 | qFRP-4 | Physiological trait | Source activity | RG788 | RZ565 |
| Osa04LNT0263000.1 | 4 | orl1 | Morphological trait | Culm/leaf | S10628 | C377 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)