© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0263100.1
CAACGGAACAAAAGACGAACTGTATTGAATTATTCAATGCAATTAAGTTTAGACAGCAGATTTCCAACAAACTGACTAGTATAGTTCACAAATTTCGAACAAAATGGCTAGTGTTCCTGTAAGAGAATGGTGACAAGACTGACCAAACTCAAACTTGGTTGGGTCACGGGTCATATTTAACCCACTCTGAATTTCTATCCATCTTGCTGAACAACTGCACTGCATACTCATTTTCAGTAGTCTCTGTTGTATGCAGTGTAGAGACCATCAGTGTCCTTGATCAGAGTTCATCTTTAACAGGCTCTGATGATGATGTTACCTCCTCTTCCACAGCATCAATCTGGGTTTTCTCATCCACTGCAGCAGCTGCACCAGCTTTCGGTCCCCTGTTCTCGTTGATAAAACTGATGATCTCCTCAGCTGTCCTTGCACCGTCGTACGACAAAAGGTTCCCACTTGATGAATAGAAGTAGATAGTTGGATATCCCTCAACCGTGAAGTCTGTTGGTATATCGTTCACAGTTCCATCCATCTTTGCTATCACTATATCTTGGTCATCTTGCAATGACACTGCAATTTCCTCCAGGATCAGGGCAAACTTGCGGCAATGGCCACACCAAGGTGCATAGAACTCAAGCAAAACATTTTTGCCAGAGTTGAAAACAATGTCATCTATATTGTCGGCCACAACAACCTTAACAGGTTGGTCATTCACCTTAGGGATAGGCTCTGACTTAACGTATGGTGTCAAGTTGCCATATATGTACTGCTTCAGCCAGGGTATGATCTGATCAGGATCCATTGTTGGATTGAGATATTTTCCAGTAGATGCTATCACGAAAAGGAGGGGCACATCACTTTCTCTGAGCCCAAAGTACTGGAAGACACGATCAGCGTCTGCAACATCACCAATTAAAAAACTTATGTTATTACCACTGAATTTCCTGGCCGCTTCATGAATCTGGCTCTTGAAGGACTCGATTCTGTCATCACCGAAGCTCACGAAAAGCATTGCTTTAGAACTAGGAGTGCTATAGTATCTTTCAAGAAACTTATGGTTGGTTGGATCAGCATCGTAGGTAACAACCATTGGGAAACCAGATACCTCGATAAACTTCTCAAGTGCGTCCTTACCAAAATCCTCCGAATCAACAAACAGCTCATCAAACGGCTTAAAGAGACGGACAATGGGGCCTTTGACACTCTGATCACCACGTGGCAAAATGCTTGCATCAGACGTGTGGAAAAAATCATAATCTGCTCGCATTTTCTCTGCCACAACCATGAAATTTTCATATTCCATACCAGCAAACTCAGGGAAAACTCCCACAAGGATCACCCCCTTGTCGACGACGGAATGGGCCGCCTCTTCTGCTGATTCAAGCTTGAGGGATGCTGGGCCGACCTGCCTCTTAAGGTACTCCACGATGCCATCGGCCTCCCTTGGGCCACCGTAGCCACGCACGTCGCTCCCCCCATTCTTCATGATCTTTATTGTTGGGTATGAATACACCCCATACTTATCCTTCAGCTCTTTGTTCCTCTCGTTGTATGCGTCCACCTTCGCGAGTACCACTGGCAGCTCGTTCTTCCTCAGAATGGAGGCTGCCTTTTCGTACTCTGGGGCGAGTTGCTTGCAGTGACCACACCTGTGAGCACGTAGTTACCAGTTAGCCACTGTTCGGCGAATGAGTGTGATGCTGTGATACTGTACTAGCTGCTCAGAGAAGTGAGTGAACTGTACCATGGGGCATAGAACTTGACGACAATGAACGGGTGCTTGGCCACCACCTCCGAGAAGTTGCCCGCATCCAGCGTTAGGACCGCCTCCTTCAGCTCCTCGGTGGCATCCACACCAACCGCGGTAGGGCTGGAGGATATCAGAATGGCAAGGGCAAAAGACAGCACCAGGTTGACAGCCATTGCTTAATCTGTAACTAACAAGTTTCCCAGGATCTCCACTAGGAAGGGGAGGCCAACTTTACTCAAGCTAATATAACCATATAGATCAGGGGAGTTGAGTGATGATGCACTAGCAGAGATCTCGAGGAAGTCAATGGGAGCTTCTTTGCTAATTTCTAGCTTTTCTTTGACTCCATGTTCCTGACCTTTGCTTATAGAAGACACTAATTAAGTATCTTTTCCATCATCTTTCTTATTTTTCAGGTAGTAAACATCATCTGCAAACATGTACTATTGCTTACTGTATAACCAACAATAGCTGAAAGCAGATGACTTTCTGTACAGAAATTTCAGTACCAGAATTTGGCTATCAGATTGCATGGTATATATTGCTTTGTCTGCAAGTAGCATTTCACCTTTATATAGTGAGTTCAAGGAAGCAACTCATATCCATCATGGCATTCCCATTTTCAAGTTCCCAATACTTGTCAGAAGAATTTCAGTTTTAGAATCATAGTCTGGATCATAAATGTCTGTCATGCTTTCACCCAAGCAAACTGTGGCACCCAATAACATTGACAATAGATATTCTCTGCTTGCAGATTTCCCCTCTCTGAATTCTACATGTTCCATGATTTTAAATTGCAAAATGTACTACATTCGAGCTCTAGCCACATGCTTCAGAGGAGAAGTTCATCAGGTCATCTGCAATTTCAGCATCTATACTCATCCTGCTCATCTGCATCTGAATGATTCTCAAGGTATCATGTATCTCATTCCTGCATGGATGGATATTATCTCTCGCGAGAAACACATTTACTTTCCTGCCTATCTCAATCCAACTACAGCCAGGTTGCTTGCTAACGCCTCTGTGCTTCATGGATCTCCTCACTCTAAAAACATCTGCCCATTTCCCAAGCTCAGCGTACATATTTGAGAGAAGAACATAGGGTCCAGAGTTATCAGGATCAAGCTCAAATAATTTCCCGGCTGCCCATTCCCCCATGTCAATGTTCTTATGCAGCCTGCAAGCACCTAATAGAGAAGCCCAGAGCACAGCATCAGGTTCCATTGGCATGTTCTCTATGAGCTCCTCAACTTCTTTCAGATGACCGGCACGACCAAGCAAATCAATCATGCAAGTGTAGTGATCTCGGGTTGGAATTATCCCATGATCCTCAGTCATGGACTGAAAGTATCTCCGACCCTCCTTGACCAATCCAGAATGGCCACAGGCAGATAAAACCCCAATCATGGTGACAGAATCTGGGCGTTCGTTGCTGCAAAGCATTCTCTCAAAAAGAAGAAGCGCATCTTTTGCACGGCCATTCTGTGCGTAACCAACAATCATTGCATTCCATGATACATTATCTCTGGCTGCCATCCTCTCGAACACCTTCGCACCATCACTGATGGACCCTGTCTTCAGGTACATGTCCACAAGGGAGTTCCCAACAAAGACATCAGATTCTGGTCCAGAGTCAAAGCGGAAGCCTTCTTTCAGGACATGTACATGAGCTTGCTGACCAAGCTGAAGGTTAGCAAGATTGGCACACGCATTCAGAACATTTCCATACGTGTAATGTGTTGGCCAAACTGACTCTCTTTTCAGCCTGACAAAGAGCCTAAGCGCTTCTTCTTCCTCACTATTATGTGCATATGTTGCAATGAGCACATTCCAAGCAACGACATTCTTCTCCACCATCTGCAAGAACACGGCCTGAGCATCTCCCACATTTGCAGACTTTGCATACCCAGTTATCATTGACGTTTCTGAGACAACACTCCTGATAGCCATGCGATCAAATACACACTTCGCCTCCCAAGTCCTCCCACACTTGGCATACATGTCCACGAGAGCATTGTTCAACACCATGTCCTCCCTAAACCTATCAGACTTCACCATGCGGGTATGGACCTGGCGGCCTTCTCTACCCGCAGCAAGGCCTGCACATGCGCTCATGACGCTTGCAAGTGTCACCTCATCAGGCACAAAACCATCTTTCATCATCCTGACGAAGAGCGCGAGGGCCTCATCGACAGGGCCATTCTGCTCATAGCAAGTGATCAGGCTGTTCCAGGAAACAATATTCCGCTCCGGCATTGCATCGAACACCTTCTGTGCCTCCTCCGGCCGCTCACACTTCGCGTACATGTCCACAAGCGCGGTACCGATGTACACATCGCTCCCGTGAGACGACTTGGTGACAAGGGCGTGCACCTGCTCCCCGGTCCTCGAAGCCTTCTCCGAGGCGCAGGCGCTCAGCGCGCTGGCGAAGGAGTAGGCGTTGAGCACGAAGTCGTCGGCGTGCATGGCGGCCAGGAAGCGGAGCGCGTCGCCGCCGCGGCCGTGCTGCGCGAGCGCCGCGACGACCGCGTTGTAGGAGCACTGGTCGGGGTCCGGGATGGCGCCGAAGAGCGCGAGGGCGTCGTCGGCGCGGCCCAGGCGCGCGCACGCGGAGAGGAGCGCGTTGTAGGAGAAGGTGTTGCGGTGGGGCATCCCGTCGAACACCCTGCGGGCGTCGTGGAGGGAGCCCAGCCGCGCGTACGCGGAGAGGAGGGTGTTGAGGAGGAAGGTCTCGCCGGCGAAGGGGGACCTGAGGGCGCGCGCGTGCGCGGCGCGGGCGGCGCGGAGGCCGGGAGCCGAGCGGAGGAGGTCGGCGAGCGGCGCGGACGCTCGGAGGTGGGAGACGAGGTGGATGCCGGTGTGATGCGGACGCGCCATGCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0263100.1 | 4 | 21700048 | G | A |
| Osa04LNT0263100.1 | 4 | 21700539 | A | G |
| Osa04LNT0263100.1 | 4 | 21701729 | C | A |
| Osa04LNT0263100.1 | 4 | 21702273 | T | C |
| Osa04LNT0263100.1 | 4 | 21703597 | A | G |
| Osa04LNT0263100.1 | 4 | 21703672 | T | C |
| Osa04LNT0263100.1 | 4 | 21704839 | A | G |
| Osa04LNT0263100.1 | 4 | 21704998 | A | G |
| Osa04LNT0263100.1 | 4 | 21705333 | T | C |
| Osa04LNT0263100.1 | 4 | 21700342 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0263100.1 | osa-miR5837.1 | Cleavage | 4.5 | 18.272 | 1 | 21 |
| Osa04LNT0263100.1 | osa-miR5512b | Cleavage | 4.5 | 16.31 | 1 | 21 |
| Osa04LNT0263100.1 | osa-miR171d-5p | Cleavage | 5.0 | 23.995 | 1 | 21 |
| Osa04LNT0263100.1 | osa-miR395w | Translation | 4.5 | 11.215 | 1 | 22 |
| Osa04LNT0263100.1 | osa-miR1847.1 | Translation | 4.5 | 10.658 | 1 | 21 |
| Osa04LNT0263100.1 | osa-miR1853-3p | Cleavage | 5.0 | 13.456 | 1 | 22 |
| Osa04LNT0263100.1 | osa-miR1879 | Cleavage | 5.0 | 14.387 | 1 | 24 |
| Osa04LNT0263100.1 | osa-miR2090 | Cleavage | 4.5 | 11.972 | 1 | 22 |
| Osa04LNT0263100.1 | osa-miR2090 | Translation | 5.0 | 17.987 | 1 | 22 |
| Osa04LNT0263100.1 | osa-miR5512a | Cleavage | 4.5 | 16.31 | 1 | 21 |
| Osa04LNT0263100.1 | osa-miR5504 | Cleavage | 5.0 | 12.587 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0263100.1 | 4 | qCCFJ-4 | Physiological trait | Source activity | RM261 | RM3785 |
| Osa04LNT0263100.1 | 4 | nan | Resistance or Tolerance | Other soil stress tolerance | RM5586 | RM3916 |
| Osa04LNT0263100.1 | 4 | gpp4 | Morphological trait | Seed | RZ569 | RZ565 |
| Osa04LNT0263100.1 | 4 | orl1 | Morphological trait | Culm/leaf | S10628 | C377 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)