© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0263300.1
AGCGTTGCAAGGAGTCGTGCTGAAAAGATTCCATATGGTCCCTCCAGTGTTCTCCAGGATTTTACACCATCATTTACCAAACTCGTCCAACGTTTTAGAGCTTACCTGATCAAAGGTATTTTTGGATGCTATGAATAACAAAACAGACCAAAAGAAAATACACGATTAAGTTCTAAAATTCAAACTCAAACAAGCCGTAACAACGCCGATAACATGTTTAGGCTCATCCAAACACCCCACGTTCAACTAACATCTCCGGCCGTCTTTTCCACAGGGAAGCAGAGATTTTGACAGTTAGAAAATAATGGACATTAGACAATGGACAGGGCGAAGAAAAACCAACACCGCGACCTCTAAAGCTAGTAATAGCCTACATACTCAAGGAAATGGATGTCGACATATCTTTTCGGTATAGTATTACTGTGCTAGCGATCTTCCAGAGTTCTTGTCGACACCGTCATAGGTTTGAAGAAAACGATACCTCAGCCTCAGATCTATAGGACACAAGTAGACTCAGCAGAGAAAAAGATAGGCTTAGCCCGAGGACCTTGACGCAGTGACGCCGTTGCAGTTAGCAGCATCCTCATCGTTTTGTCTATAGCTGACTGTAAGCCTAAAATTTTTTTACTCCCTATGTCCCATTTTAAGTGCAGCCATGGTTTTTCGCTTCCAACTTTGAACGTCCGTCTTATTTGAACGCTCCCAACATAAGTCACAAGTAAAGTGTTATTCATGTTTTATCATCTCATAACAGCAAAAATACTAATTATAAAAAAATTTCAAATAAGACGGATGATCAAAGTTAGTTGAGTGCGGAAACTTATGGTTGCACTTAAAATGGGCGGATGGAGTAGTATATTTCTAGTGAATTAAAAGTCAATGGTGAAAAATAAATTACGATAAAAGAATACATCAAAATCCACTTTTCATTTAAAATCTAAAATTCAAATTTTGCTACTCACGCCAGTTTGGCTCCGACGTCGGTCGGTCGTTGATGTGTGCGTCGATTAGGCGCATCTTTTGCCCTGCTGACACGGGAGCAAAGATATCAGAGACAGCAACACTTGTGATAGGCTAGCTAGCAGCTACTAGTAATAAGCAGTTCAACGGTGACAACATCATATGCACAAACATCAACTGATCAAGCCATCGTCGATCAGAAGACCAGCGACCAGTGGAGTGTCCATTTCGCCAACGGGGAGATCGCCATTGATTTGAAGAGCATGTCGAGCTGTTCCCTCTCAATGTTCCTGTGACACAAGGATGCAGAACCGCGTCATCACGACGTCACCCCGGGCAGGCGGACACCACATAAGCCACCTGTGTATGAACCGCGGGTCCCAGGGATTAGGTAGATGCCCACGTGGATCGCTGCTCTGCTGCCGCCACCAGCAACGCCACTGCACCAGCCACCGCCTCAACACTCGTCTGGAGTGGTGGACTTAGCCTAATCTTTGCATGGCCAGTAACATTTTTGTTGGAGATTTCAGAAAACAGTAGACGGTACTTCCATTGCTGTTCGACATACTTTATTTTCTTGCCTTTTTTTTTCCTTCGCAACTTCTTTAGATAATGGAAGCATTTAAATCTCCAGCCTCTATATCACTCGGCCAGAAGATTTTCATGGTAGTGTCCTAGCTTGCCAAATATCATAGTGAAGCAACTGTCACTTGAATAAGAAGCCGGGATCAATTGGATTACAGCAGGAATTGACTCTCTTTTGTAAACTTTTTACATGCTCTACGTAATGGTGATTGGAGGAGCTTCTGGATTTTGAACCAAAAAAACAGAGAACCCTGGTGGTTCGTCGGAGGCATGCCCCGACGGCAGATACACGCCGCCGCGACTGCCGCCGCCGCCGGTGGCCACATAGCCTCGCCGCGCCGCGTCTTCCCGCGGAAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0263300.1 | 4 | 21729389 | A | G |
| Osa04LNT0263300.1 | 4 | 21729536 | A | G |
| Osa04LNT0263300.1 | 4 | 21728954 | G | C |
| Osa04LNT0263300.1 | 4 | 21731882 | T | C |
| Osa04LNT0263300.1 | 4 | 21729439 | T | C |
| Osa04LNT0263300.1 | 4 | 21729488 | T | C |
| Osa04LNT0263300.1 | 4 | 21730483 | T | A |
| Osa04LNT0263300.1 | 4 | 21730625 | A | T |
| Osa04LNT0263300.1 | 4 | 21730662 | A | T |
| Osa04LNT0263300.1 | 4 | 21730944 | C | T |
| Osa04LNT0263300.1 | 4 | 21731494 | T | A |
| Osa04LNT0263300.1 | 4 | 21733081 | A | C |
| Osa04LNT0263300.1 | 4 | 21733154 | T | C |
| Osa04LNT0263300.1 | 4 | 21733250 | G | A |
| Osa04LNT0263300.1 | 4 | 21733310 | T | C |
| Osa04LNT0263300.1 | 4 | 21733343 | C | T |
| Osa04LNT0263300.1 | 4 | 21734385 | T | C |
| Osa04LNT0263300.1 | 4 | 21734489 | G | A |
| Osa04LNT0263300.1 | 4 | 21734971 | A | C |
| Osa04LNT0263300.1 | 4 | 21735378 | G | A |
| Osa04LNT0263300.1 | 4 | 21736994 | A | T |
| Osa04LNT0263300.1 | 4 | 21737266 | T | C |
| Osa04LNT0263300.1 | 4 | 21737698 | A | T |
| Osa04LNT0263300.1 | 4 | 21738113 | T | C |
| Osa04LNT0263300.1 | 4 | 21729602 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0263300.1 | osa-miR812p | Translation | 1.5 | 11.152 | 1 | 24 |
| Osa04LNT0263300.1 | osa-miR812t | Cleavage | 2.0 | 9.067 | 1 | 24 |
| Osa04LNT0263300.1 | osa-miR812u | Cleavage | 2.0 | 9.067 | 1 | 24 |
| Osa04LNT0263300.1 | osa-miR812v | Cleavage | 0.0 | 8.044 | 1 | 24 |
| Osa04LNT0263300.1 | osa-miR5143b | Translation | 5.0 | 16.129 | 1 | 24 |
| Osa04LNT0263300.1 | osa-miR812b | Translation | 3.5 | 11.152 | 1 | 22 |
| Osa04LNT0263300.1 | osa-miR812d | Translation | 3.5 | 11.152 | 1 | 22 |
| Osa04LNT0263300.1 | osa-miR1429-5p | Cleavage | 4.0 | 17.502 | 1 | 21 |
| Osa04LNT0263300.1 | osa-miR812h | Translation | 2.0 | 9.866 | 1 | 24 |
| Osa04LNT0263300.1 | osa-miR812i | Translation | 2.0 | 9.866 | 1 | 24 |
| Osa04LNT0263300.1 | osa-miR812j | Translation | 2.0 | 9.866 | 1 | 24 |
| Osa04LNT0263300.1 | osa-miR812k | Cleavage | 3.0 | 11.72 | 1 | 24 |
| Osa04LNT0263300.1 | osa-miR812m | Cleavage | 3.0 | 11.72 | 1 | 24 |
| Osa04LNT0263300.1 | osa-miR812n-3p | Cleavage | 2.0 | 9.067 | 1 | 24 |
| Osa04LNT0263300.1 | osa-miR5143a | Translation | 5.0 | 16.129 | 1 | 24 |
| Osa04LNT0263300.1 | osa-miR5508 | Translation | 4.0 | 20.81 | 1 | 21 |
| Osa04LNT0263300.1 | osa-miR5528 | Translation | 3.5 | 12.304 | 1 | 21 |
| Osa04LNT0263300.1 | osa-miR812s | Translation | 4.0 | 9.866 | 1 | 24 |
| Osa04LNT0263300.1 | osa-miR812a | Translation | 3.5 | 11.152 | 1 | 22 |
| Osa04LNT0263300.1 | osa-miR812c | Translation | 3.5 | 11.152 | 1 | 22 |
| Osa04LNT0263300.1 | osa-miR812e | Translation | 3.5 | 11.152 | 1 | 22 |
| Osa04LNT0263300.1 | osa-miR812g | Translation | 2.0 | 9.866 | 1 | 24 |
| Osa04LNT0263300.1 | osa-miR812l | Cleavage | 3.0 | 11.72 | 1 | 24 |
| Osa04LNT0263300.1 | osa-miR812n-5p | Cleavage | 1.0 | 17.74 | 1 | 24 |
| Osa04LNT0263300.1 | osa-miR812f | Cleavage | 2.0 | 11.72 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0263300.1 | 4 | orl1 | Morphological trait | Culm/leaf | S10628 | C377 |
| Osa04LNT0263300.1 | 4 | qCCFJ-4 | Physiological trait | Source activity | RM261 | RM3785 |
| Osa04LNT0263300.1 | 4 | nan | Resistance or Tolerance | Other soil stress tolerance | RM5586 | RM3916 |
| Osa04LNT0263300.1 | 4 | gpp4 | Morphological trait | Seed | RZ569 | RZ565 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)