© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0263400.1
AAATGTAAACTTTAGCTATATTCATTGCAGTAGCCAGTGCCCAGTAGGGAGAAATCCTTACATCTGCTAGGGAAGCGCTAAACTAACTACATCATCCAAACGTCAGCTTCTCCAAGCTAGCGAATTTACAGGCCGTATTTTTATGTACTGATATAGTACAGCATAATACAAAGTGGAGGCGACAACCGCCTACAGATATACAGAAATTCCTCTCTTGTCAACAGCCTCTTTCCTCGTGGAGCCTTTCTATACTGTACAGTAAAATCAGATCGGTGTAGTAACAGAGTTACGACATGTTGCTGACATCTCTAACATTATATATCTACGATGTCATGGGAACAATTCTCCTGCTGAACATTCATCAGCACTCATGGATGACTGACGCTCAGAACCTCTTTGGGGAGCCGTAGGGGCTTTGGACCTTCAACTGGCTGATATCCTGCCAGGTATCCGAAATCGTGGGAATTCGTCTTGTCTCGTTCATCATGTAGCTTGATAGATTATAGGAAGTAGCACCATTGGAAAATGTTGGGTGTGGTGGGGATGGCAGGCAGCTCCAGTTGGATTGCTTAAACTGCCGCAATGGGCTTGAGCATGGGGACACCGGTAGAGACATGTTTGTTCTCACAACGGAAATAGGACTGCTGGCGGTGTGTGGTGAAGGAACGGCTGTGGAAAATCCGGTAAAATCTCTTGCACTCACTCCTATATCCTTTAGGGGAGTGATACTTTTCCTTGAGAACTCCCTGTTGGACGTTGTATGCGTCCCATCTGCTGGTGCAAACGCATTTCTCAGTGCACCAGATTTCGCAGCTCTTACTGCTGGATGGTCCTGAACAAAAGGGTGATCCATCAACTGAGTTGCAGTGAAGCGAGATGCAGGATCACGTTTTAAGCACATCTGCAAGAAGCTTTTTCCTTCCTCAGAAAAGCTGTCTGGGATTTCAGGTATCTCTTTACTGTTTGCGATCTTAAATATAGCAGCTACCCCCTCGTATTTATGCCAAGGAGGTTTTGCCGTTGCCATTTCAATAATAGTACATCCCAAACTCCAAATGTCAACTGGTAGATGGTAACCTCTACCGTTCATTATAACCTCAGGAGCCATCCAGTAAGGACTTCCTTTGAAAGAGCGTATTTCAGCAAAAGATGATATATGCTTAGCCATGCCAAAGTCAGCAAGTTTGACTTCACCATTAGGGCCGACAAGTATGTTAGCACCTTTAATATCTCTGTGGACAGTGTTCCTCCCATGCAAGTAGGCAAGACCAGAGAGAATTTGTCCAGTGTAATTACGGATCACAGGTTCCTTAAAAGGACCATACTCTCTAAGTAATTTATGAATTGAGCCCCCAGAAACAAACTCCAGATAAATTGAAAGTGCATCATCAGTCATCTCACTTCCATAGTACTGCACAATGTTTGGGTGCGAAAGTTGCCTAAGCATATCTATTTCCTGATTCAATTGCTTGAGTCGTTCTTTTGAATGTGGATCATCCGAAATAACTTGGACCTCCTTAATCGCACAGAACTGCCCATTTTCACTGTTAAATCCAAGGTAAACCTGGCCAAATGTACCGCTCCCTAACAATTTGCCTTTTTTCCATTGTGATTCGGATTGCAAGCAAGTAGTGGGACCTAGAGGGTGAGGCGAGTAAGCAGTGGGAGATGGGGGAAGAGGTGAACAAGTAGCAGGACCTGGAGGAAGAGGTAAAGGATGAGGTGGGCTCTTCAATCCATCCATCATTTTTACTGGTGACCTTGGACTAAAACCAAATTCCCTTGAATTTACATTATTTACAGCAAAAGTATGGCCTTTCGGTCCAGGGGAGAGGCTTCTTGTTCTTGGAGCAAGAAAATCCTCGGGCAACATTCTGCCACGTGAACTAGTTTCGCTAGTTGACAGATCATCACAATGCAAATGAAGTTCTCCCATATTAGTGACAGGAACCTCGAAGAACTTCCGATGCTCCCGTGGCATGCTATAGGACATGAAATGATTGTCTTCATTTAGGATCTTATGTGAGTCAGATGGCATATTTCTTCCCCTGACAAAAGACGCCGGATCCGTAGACCTACATACTTGCTGATCCGTCGCCTCGTCCGACGAATCATGCGAGCACACGCTCAACTCCTCCGACGAGGCGTCGCCGGCGACGCCGCCCACCACATCCCCGTTCTCCTCGAACCTTACAGGAGCCGGCTCCAACTCCGGCTCCTGCCCCTGCCCCTGCCCCCCCGGCCCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0263400.1 | 4 | 21753291 | A | G |
| Osa04LNT0263400.1 | 4 | 21753669 | C | T |
| Osa04LNT0263400.1 | 4 | 21753723 | T | C |
| Osa04LNT0263400.1 | 4 | 21754059 | T | G |
| Osa04LNT0263400.1 | 4 | 21754794 | T | C |
| Osa04LNT0263400.1 | 4 | 21755951 | C | T |
| Osa04LNT0263400.1 | 4 | 21756551 | A | G |
| Osa04LNT0263400.1 | 4 | 21755024 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0263400.1 | osa-miR6245 | Cleavage | 4.0 | 14.189 | 1 | 21 |
| Osa04LNT0263400.1 | osa-miR6253 | Translation | 4.0 | 11.444 | 1 | 22 |
| Osa04LNT0263400.1 | osa-miR171e-5p | Translation | 5.0 | 19.933 | 1 | 21 |
| Osa04LNT0263400.1 | osa-miR1428a-5p | Cleavage | 5.0 | 19.801 | 1 | 21 |
| Osa04LNT0263400.1 | osa-miR1866-5p | Cleavage | 3.5 | 18.501 | 1 | 24 |
| Osa04LNT0263400.1 | osa-miR2874 | Cleavage | 5.0 | 21.622 | 1 | 24 |
| Osa04LNT0263400.1 | osa-miR5154 | Translation | 4.5 | 19.146 | 1 | 24 |
| Osa04LNT0263400.1 | osa-miR1432-3p | Translation | 4.5 | 19.867 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0263400.1 | 4 | nan | Resistance or Tolerance | Other soil stress tolerance | RM5586 | RM3916 |
| Osa04LNT0263400.1 | 4 | orl1 | Morphological trait | Culm/leaf | S10628 | C377 |
| Osa04LNT0263400.1 | 4 | gpp4 | Morphological trait | Seed | RZ569 | RZ565 |
| Osa04LNT0263400.1 | 4 | qCCFJ-4 | Physiological trait | Source activity | RM261 | RM3785 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)