© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0264000.1
GTCAACGTTACACGATTAAGAAAAAACTGACAAGGTAGTCCAAGACATATACTGCAGTTCATTTGTTTTTACCTACTATTGCTGAATTCAGTAGTACACATACATGATAGTAGAATTCCCAAATAGAACTGGAAATAGAAAACTGGATTGTACAACTGAAACAGTCGTATATACAACCTTTTCAAGTTTGTCAGAAGACAGGTTTTCTGCTATTAGGCATTATAACCACAAAGACAGCATCAGATATATCCAGAAACCGAAACTGCGACAGAACAATCGAACTTTATCCCCTTTCAGTAGAATTTACACACACACACACACACAAAAATCTAGAAATCCCCTGTCCCAATCCTCACATCTTCACCTAGACATGCATTTGAATAGCCGGGCACATCATACGGATCGAGGGTGGGGGGGAGCACACCACTACATTCCGCTAAATGCATGCTTAAAGACTTTTTGGCAGAGCCTAAAGAACAAAGAGCTTCGCCTTCGGTGGGAGTGCCTCGCGGATATGAAGTTCGATAGTCTGACGAGCAATACTGCAGAGATAGTCGTTCTTAATGTCACTTTCCAACATTCTTTCAGTTGTATCCACAGTTATAACGTCTAGTGCAGTTGCATTTTCCACAACATGTAAAAGAAACTCAAGTTGTCCTCTAGCCCCTTTGAATCCTGTAACACAAAGGTTCTTCAGATATTTGTATTCATCGTGCCCAAGTTCATGTCTAAGGGGGCCTTCTTGTGCAAACCATAGGCTATGACCGCTAGCAAAATGCACTTCCACCTTTTCAACGAAGGGTGCAGCCCTCATGACATAAGCTAAGTACAGAATTTTGTCGGAACCATGAGATAATATGTGCGCAAACAATTGTATGTGTTTGAGACAGGAAAACTTCAGTGAGTTATCTAACGACCATAGATTCTCCAGTTGTAGATCAGGAATACATAATGTCAGCTTGTGGACATTTGGAAGGCCATGGAAAAGGGAAGCAACAACATGGTGAAAAATGGCGTCAAAAATGAAAATGTGTGCATTGACCAGCTTTGACGTATGATTGAGGACAATTGGAACAAATTCACCCTCATATATAAAGGTAGAGAGTTTTGTAGCGTGGAGCTCTATCTTGGTTATGACACAGCAACTAATAAGCAGGTAGGCTAAATGGGACATCGGACGATCTACCCTAAGGTCATCCTTCAGATGGCATCTGACCATGCTCAACCACTCAAGACAGCAACAGTTGCACAACATGTTCTCAAGTTCCTTTCTTGTAACATGCACCAAATTAAGCTCAAGCTTCCTTAGGTTTGGGAAACCTCCGAACCAGGAAGGTGGTTGCAAAGAGATAAAGCTAAATTGAAGATGTTGTAGACGGCAAATGCTTCCACTGTCTAAAAGTTCAAATGGAAATATGAACCGATCGTCACAACGAGCAAATCTAATAGGCACTAAATCAAAAGATAGATGTTTTGTCCTCGCTGACACAGCAAAACTAACCCACTTATTCAGATTATCAACTAGAATGCTGTCAAATTCAAACTTAATTCCAAATGCTTCCACCATCTTTCCTTGATAATTCTGTAGAACTTTTTCAACATTATTAATGAATCTCTGACAATATTTATTTTGACCACGCCTGCGACTACCACACACTGCTCCACCATCAAGAGATATTTTTGAGCGAAGCGTCCACATGGATCTCCACTTACTTGATAAAACACTAGTCCTTATTGCCTCTTTCTGAGGCAATTTTGATAAAATTGTGCATATCAAATCCTGAATTGAAAGAACAACATACCTTCAAGTTAAGAAATCCAGTACATAATTCAATATGAACACAAAATGGGGAAGAGAAGATACTGCCGGGAGGTCTTCAAATTGAAGATTTGACTTCCCTTTCTCACTTATTTCTTTACCATGGGTAGGTTTCGGTGTTGTCCTTTTGCACATTAGATACTTCCCCATTTTAAGTACAAAATTAATAAAATGCAGCTCCTGCGGAAGCTCACTGGACAGCATCCTGGAAACGCGAGATGCTGGAAGGCTGTTCTCCTTACCCCCAATAAACTCCAATGAACTTCCTCCAGTGAACCCCACCCCCTCTTCTTCCGAATGCGAGAGGAACTCGCGTCAGGCTAGGCTAGGCTAGGCTTGGTTTGGTTGAGGCCGGGACGGCAACCAGGCAACCAGCCGGTGGAGTTCCTGTCGAACCCGTTCTTCACCGAGCCTGTGCATCGAATTCGCAAGCTCGGAGGTTTCCCGTCCAACGCCGGCGTCGGTCATGCCCCGGCGAGAGCACTCGTCCCTTCGTCGGCCATGCCCGCGAGCCTCGTCGGGCCACGCGGGGAGGAGACGGTCGGAGCGGCGTTGGGGAGGGAGACCATCGAGGCCCCCCCAATACGCGAAGCACCGATCCCCTCCTGAGTTCCCTCCGCTGACGCCGACGCCGACGCGAGATTCAGCAGGATCCGACGAGCCGCCGAGGGAAGCAGCGGCCAGATCTGGACGAGGCGGAGCCCTCCGACCGGTCGACGGCTGGCGGTCGGTTCCTGTGCCGGAGAAGGTAGGAGAGGCGGAGGTCGGGCGGGCTCCAGCGGAGGTTGGCTGCGTTTGTTATCGAGGAAGAGGAAGAAGAAGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0264000.1 | 4 | 22268832 | A | C |
| Osa04LNT0264000.1 | 4 | 22267661 | A | G |
| Osa04LNT0264000.1 | 4 | 22268011 | A | G |
| Osa04LNT0264000.1 | 4 | 22268605 | T | C |
| Osa04LNT0264000.1 | 4 | 22270461 | A | G |
| Osa04LNT0264000.1 | 4 | 22270564 | A | G |
| Osa04LNT0264000.1 | 4 | 22270839 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0264000.1 | osa-miR812q | Cleavage | 3.0 | 10.427 | 1 | 24 |
| Osa04LNT0264000.1 | osa-miR812q | Translation | 3.5 | 15.032 | 1 | 24 |
| Osa04LNT0264000.1 | osa-miR168a-5p | Translation | 5.0 | 18.348 | 1 | 21 |
| Osa04LNT0264000.1 | osa-miR417 | Translation | 4.5 | 23.412 | 1 | 21 |
| Osa04LNT0264000.1 | osa-miR435 | Cleavage | 5.0 | 22.69 | 1 | 20 |
| Osa04LNT0264000.1 | osa-miR1877 | Translation | 3.5 | 19.783 | 1 | 24 |
| Osa04LNT0264000.1 | osa-miR2863a | Translation | 5.0 | 17.373 | 1 | 21 |
| Osa04LNT0264000.1 | osa-miR2873a | Translation | 4.0 | 23.547 | 1 | 24 |
| Osa04LNT0264000.1 | osa-miR2873a | Cleavage | 4.5 | 9.906 | 1 | 24 |
| Osa04LNT0264000.1 | osa-miR2873a | Translation | 5.0 | 5.014 | 1 | 24 |
| Osa04LNT0264000.1 | osa-miR2873a | Translation | 5.0 | 19.524 | 1 | 24 |
| Osa04LNT0264000.1 | osa-miR5080 | Translation | 3.5 | 17.017 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0264000.1 | 4 | nan | Resistance or Tolerance | Other soil stress tolerance | RM5586 | RM3916 |
| Osa04LNT0264000.1 | 4 | nan | Morphological trait | Culm/leaf | RM3337 | RM3785 |
| Osa04LNT0264000.1 | 4 | gpp4 | Morphological trait | Seed | RZ569 | RZ565 |
| Osa04LNT0264000.1 | 4 | orl1 | Morphological trait | Culm/leaf | S10628 | C377 |
| Osa04LNT0264000.1 | 4 | qGW3-2 | Morphological trait | Seed | RG393 | RZ403 |
| Osa04LNT0264000.1 | 4 | qCCFJ-4 | Physiological trait | Source activity | RM261 | RM3785 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)