© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0264200.1
AACTTCAAGCTTATTTACATTACACATAGGTTAAAGAGGATAACAGTGAGGATAGCTGTTTGCAAGAATCTCCTTGGATATAAGTACACTGTTGAAACTAGAATAGGATGAAATGGTGAAAATTTCTAACAGGAAAACGGGTTACTTTGACCTTAATAATGTAATTTCTCCCCAAAACGAATTTCAGAATACATACCTAGTCCTAGCTGAGAAATATAAAGCCGCGGCGATTTGACGCACCTCTATATGATGAATAATTTACACATGTATCAGCCTTAGATCGGTCATTCTTGATTCGCAGGTCTTTGGCCTGTATGTGCCGCTGCCAGAAGCCCCACTGGAGATTTTGACTTGACAGTAGCTCGGTAAGATACTTGCTACACAATGTGTTGCGTCTTCAGATTTCAGTAATGTATAAGCCGATAGTCACCTTGTCACAGCTGTACCATTCTATAAATATATAATCCTATTTCATACCAATCCATGAGCAGAGGAACCACTGAAAGACTCCCAAGGGAAATGCAACTAATGCGTTATCGCTCAGAAAGCTGTTAGATGATTTCTTCAAGATGACTCCAACTTGGCTACTATTCACTTGACCCACTGTTTCTTGAGGAGGAATCTCGTGAGTGACGTTTTCCTTCCATTGCTTCTTTCTTTTCCTGGCAACTGTGGCAAAGGAAAGGCCCATCCCATGGACGCAGCTTTCCTGACTTTGACAAACCCTCATGTATGGATATACCCTGACCAGACTCTAACTCTACTTGACAAATTGCACATATGAAGAGCTTGAACATATTCCGAACTGGATATTCAGAATCTAGCCGTCTTGAAAGGGAAGGACATCCATCCTCAAAGACTTCCTCCACCAAATCTGGCTGGGTACATTGGTCCTTATCTGCATGACATGGTGAGTCTGATGTTGCTTTCTTGTAAAAGATATTTTTGAAAAGTCCTTTCCCTGCCTTTTTTGCAGGTTGCACAGTGGGGCTTATTTTTTCTGGAGGTATTATGTCAATGACAATACAAGTCGTATCATCTCTCAATCCTTTTGATGCAATTGCTTCTTTGACAATTTGATCCGCTGCAGCTTCTGGAGGAAGCCCTCGTGCACAACTAAAAGCCGTATCCACAGTCAAGGCATCCCAAACACCATCACTTGAAATAATGATTCTGCCTCCAGCACTTGATAGCTTGATCTGCTTCACATAAGGCACGGGAATGATAAATTCACCTACATCCTGATCACCAATTGATCTTGATAGGCACAAGCCACCAGGCCAACATCTAAGTGGCCCAATCTCAGCTCCGCCGACAACATTTAGCCTTCCAACTTCACCTCCGCATTCTGTTACACGTCCAACCTCCTCTTCGCTAGCATCGAAGCGATGGTCAGCGGACAAATGGTAAATGGTACCCTCAGCTTCAAGGACGCACCGCGAATCGCCAACGGATGCAACGGTCACAACGTACCCATCGATTATGACAAACGTCACGGTTGTTCCTGAAGAATGGGCTCTTGTTTGAAAATCCTTGTCCGTCTTGACGAACCCGGCCACCAGCGCCCTCGGGAGCGCTGCGAGCCACTCGTCGCCGCTCAGATCGGCAGGAACGCAGCACATGACGTTGCTGAGGATATTCTCCTTGGCGTACACCGCGGCGCCGCTCCCGTTGTGCCCATCGAACAGGGCGAAGGCGGAGAAGGGGGCGCCGCCGGCCGGGAGGCGCTCGCAGGCCGGCTTGAGCAGCGCGAAGTCCTCCCCCTTCTTAGCCCTACACGCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0264200.1 | 4 | 22389587 | A | G |
| Osa04LNT0264200.1 | 4 | 22390331 | A | G |
| Osa04LNT0264200.1 | 4 | 22391590 | T | C |
| Osa04LNT0264200.1 | 4 | 22392531 | G | C |
| Osa04LNT0264200.1 | 4 | 22392948 | G | A |
| Osa04LNT0264200.1 | 4 | 22393240 | A | T |
| Osa04LNT0264200.1 | 4 | 22393528 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0264200.1 | osa-miR5535 | Cleavage | 4.5 | 15.147 | 1 | 22 |
| Osa04LNT0264200.1 | osa-miR5544 | Cleavage | 5.0 | 7.473 | 1 | 22 |
| Osa04LNT0264200.1 | osa-miR169i-5p.2 | Cleavage | 2.5 | 15.678 | 1 | 22 |
| Osa04LNT0264200.1 | osa-miR2098-3p | Cleavage | 3.5 | 8.356 | 1 | 20 |
| Osa04LNT0264200.1 | osa-miR2122 | Cleavage | 4.0 | 14.865 | 1 | 22 |
| Osa04LNT0264200.1 | osa-miR2863a | Cleavage | 4.5 | 11.295 | 1 | 21 |
| Osa04LNT0264200.1 | osa-miR2871a-3p | Cleavage | 3.5 | 11.545 | 1 | 21 |
| Osa04LNT0264200.1 | osa-miR2871b | Cleavage | 3.5 | 11.545 | 1 | 21 |
| Osa04LNT0264200.1 | osa-miR5150-3p | Cleavage | 3.5 | 16.378 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0264200.1 | 4 | orl1 | Morphological trait | Culm/leaf | S10628 | C377 |
| Osa04LNT0264200.1 | 4 | qCCFJ-4 | Physiological trait | Source activity | RM261 | RM3785 |
| Osa04LNT0264200.1 | 4 | nan | Resistance or Tolerance | Other soil stress tolerance | RM5586 | RM3916 |
| Osa04LNT0264200.1 | 4 | nan | Morphological trait | Culm/leaf | RM3337 | RM3785 |
| Osa04LNT0264200.1 | 4 | gpp4 | Morphological trait | Seed | RZ569 | RZ565 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)