© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0265000.1
TGCAAAATTATAGCCTCAAAAACACCCTGAATGCTTCAATAGAATTAGTAACTGTCATCAATCATAAAAATTCAGAACATCAATTATATTTCTACCTGGTCTAGCAAGAATTGCACATTCTTGTCATCAACACAAATTAGGTAGCAATGCAAATTGTCACCATAATCAATCTTTCAATTAGAAAACCCTATTTAACCATTTGCAGATTACATAAAACTGTTCAAATGCACACACTGTACACCCTAACAATTTCAAGGTTTTCAGCTATTATACAACTGAAGCATAAAACTATTCAAATACACACATTGTACAAAATTACATTGTAATTATACCATTGGAGATGATGTAATTAATAAAAAAGTGAGTTAAAAAATTATACCATTGGAGATGATGTAAAATTATCATTATCTTGAACAGCTTCATTAACATCATCATTAATTTCATTCTCTGGTTCAACACCTTCATTCCAAATTAAAAAAATGCATCCATTACAGTTAACTATGTATTATTTTACATGTTTCAAAACATATTACAGTTATTTAGTTAAGGAATTACAACAAAAGAAAGAGTGTAATTTCAGTAATAAATTACTGTAATTGATGAATTAATGCACTATAGTAATAGTAATAGATATAGTATTTATAGTGCAAAATGATAAAGTACACATGCATACTAATTTCAAACCATGCATTTAACTTGGTGACATAAAAAAGAATAAAAAATGCACATCATATTTCTCCTAGTGAAGATATTAGCCACCATTTTCATTTTCATTTTCAAGAAACAAGTCCTCTAATTTACATACAAACAAACAAACTGGACAAGATCAAGAAGAACACACAAAAGTAGCCAAGGACAGCAAAGTCAATTATTCAAAGTTACAAACAAAAATATTAAAAGAGTAACATACTTACAAAACAGCAAAAAAACATTCATTATAGCAAACTATGAACTGTTTTACATGTTTGCAAATATATTACAGTTTTTTTAGTTAAAGAATTACACCAAAAAAATTTTGTAATTTCAATAGTACATTCCTGTAACTGACACAAATTACTAACTCAGTTCATCATTTAACACAGTACTACATCTAGAGTTCATTGTCTCAAATAAGGCAGATAAAAACAAAATCTAAATATCAGAAAAAGTCACTTCAGAAATAAACTTAAACCTAAATACATCAATAGGCCCTAATATATACCTGAACTCTAGTTATTGTGGACAATTTCCAAATAGACAATGTTAAAGACATCAGTATAAAGTAAAAGGAGATAAAAGATCATGTTTACTTCTGCATTTATTAATCTGACTGTGTAAAATTCTGTATAGAAAACAAATCAATCATCTGAAATCTACCATGTGAAGTGATCTCAATCCATCATACATGTTTCACAGATTGATAGAACAAATTTAAGTTACACAGTTTCAATTCAAAAACAGAAACTGATCAGGTAAGATATTACAGTTATTTAGTTAAAAAATTACACAAAAAAGGTGAAATTTCAATAGTAAATTCCTGTAACTAACACAAACTACTAACTCAGTTCATTATTTAACACAATACTATATCTAGAGTTAAATTTCAGAAGTAACATGGAAGTAAATTGATAAAGTTTCAAACATACAGATCAGGAAGTATTCTCTATAAAAAAAAGTGGCCTCACATCAGGCAGATAAATGCAAACCTGAATATCAAAAAAAGTCATTTTAGAAATAGAACTAGACCTAAAAAATTCAGAATTGTTGTAATGTCATGATAATTTTACCTTACATTTTTTTTAGATAATTTCAACGAACTAGTCAGTGTAACGTATCGATATCAACAAAATTCAAAACTCTTAACATATCAAAAAGTTAGTGTGCAGTACTTATCTTTTTCGCATTCATGGCTTCCCTCTTAGGACACCAATTCAAATCAACTTCCCGGAGAAAGGAAGAACGATATTGCCAACGAATCGTCGATGACTCCCACAAATCAGCGTCAAAAACCCACCACGGCGAATCGATGTTGTGTCGCCTTCCACAATCGCCGCATCGCGTGGGACGATGAGAGCAAGAAATTTTCTCGCCCTGTATGCTCTCACTC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0265000.1 | 4 | 23071517 | C | A |
| Osa04LNT0265000.1 | 4 | 23071015 | C | A |
| Osa04LNT0265000.1 | 4 | 23073092 | A | C |
| Osa04LNT0265000.1 | 4 | 23074874 | A | G |
| Osa04LNT0265000.1 | 4 | 23075431 | A | C |
| Osa04LNT0265000.1 | 4 | 23070479 | C | A |
| Osa04LNT0265000.1 | 4 | 23071918 | T | G |
| Osa04LNT0265000.1 | 4 | 23072337 | T | G |
| Osa04LNT0265000.1 | 4 | 23072480 | G | A |
| Osa04LNT0265000.1 | 4 | 23072832 | T | G |
| Osa04LNT0265000.1 | 4 | 23070122 | T | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0265000.1 | osa-miR5143b | Translation | 4.5 | 13.358 | 1 | 24 |
| Osa04LNT0265000.1 | osa-miR5143b | Cleavage | 5.0 | 15.098 | 1 | 24 |
| Osa04LNT0265000.1 | osa-miR818f | Cleavage | 5.0 | 15.139 | 1 | 21 |
| Osa04LNT0265000.1 | osa-miR443 | Cleavage | 4.5 | 11.855 | 1 | 22 |
| Osa04LNT0265000.1 | osa-miR1429-3p | Cleavage | 5.0 | 10.564 | 1 | 21 |
| Osa04LNT0265000.1 | osa-miR2055 | Cleavage | 4.0 | 12.441 | 1 | 21 |
| Osa04LNT0265000.1 | osa-miR2922 | Cleavage | 5.0 | 18.015 | 1 | 20 |
| Osa04LNT0265000.1 | osa-miR5143a | Translation | 4.5 | 13.358 | 1 | 24 |
| Osa04LNT0265000.1 | osa-miR5143a | Cleavage | 5.0 | 15.098 | 1 | 24 |
| Osa04LNT0265000.1 | osa-miR5152-5p | Cleavage | 4.0 | 12.599 | 1 | 21 |
| Osa04LNT0265000.1 | osa-miR5822 | Translation | 3.5 | 14.957 | 1 | 21 |
| Osa04LNT0265000.1 | osa-miR5148a | Cleavage | 4.5 | 12.645 | 1 | 24 |
| Osa04LNT0265000.1 | osa-miR5148b | Cleavage | 4.5 | 12.645 | 1 | 24 |
| Osa04LNT0265000.1 | osa-miR5148c | Cleavage | 4.5 | 12.645 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0265000.1 | 4 | qPH1-4-1 | Morphological trait | Dwarf | RM241 | C2807 |
| Osa04LNT0265000.1 | 4 | qCCFJ-4 | Physiological trait | Source activity | RM261 | RM3785 |
| Osa04LNT0265000.1 | 4 | d11 | Morphological trait | Dwarf | nan | nan |
| Osa04LNT0265000.1 | 4 | nan | Resistance or Tolerance | Other soil stress tolerance | RM5586 | RM3916 |
| Osa04LNT0265000.1 | 4 | orl1 | Morphological trait | Culm/leaf | S10628 | C377 |
| Osa04LNT0265000.1 | 4 | nan | Morphological trait | Culm/leaf | RM3337 | RM3785 |
| Osa04LNT0265000.1 | 4 | gpp4 | Morphological trait | Seed | RZ569 | RZ565 |
| Osa04LNT0265000.1 | 4 | qChla4-1 | Morphological trait | Shoot/Seedling | C2807 | RM241 |
| Osa04LNT0265000.1 | 4 | qChlab4-1 | Morphological trait | Shoot/Seedling | C2807 | RM241 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)