© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0265600.1
GTCTAGTTTACACGCCGTTGTCATCATCGTCTAAATAATTAAGCATGCGTTCTCAAATATTAACATGAAGCTGATTATATATACCAGATGATTATATTTTGTGGCAACTTGTCAGTAGGCATTCTGTAGTCTTGTTTTTTGCTAACTAAACTACTCGAACAGTCTTGATGGCTATAGCTCATGACCTAGCTAGTAGCTAGGAAGGCATTTCTGAAAAATTTAGGCAGAACAGTGTCAGGCCAAAAGCCCAAAACTCAGCAGTTTAGATATGCACACAGAAACTCCGATCGATCTGAAGTGCAGGACAAGCTTCATTCATTCAGGTCATAGATGCATGAACTGAGACCACCATGGCCTCTAAATCATCAGGAGAAAGCTAATAGCAAAGCTGAGAACGAAACATTGAAAGCTACAAATCAGTTTCCATTTTATTCCCATCAGTTTCCATTTTATTCCCCCCTTTGATCCCTGTGACCTGATCCTGCAGAGATAAGCATGGTTGGTTAAGCAGCCCAGAAGAAAGAACACAAAAAGCCAAACCACACCCTTCATTCCGGTGTATGACAGGTCGAGGTCTACATGCCAAAGCTCTGCCCTTTACACAACATTTTTTCTTGCTGGGAGAAGCTTCATCTTTGTCTCAAGGGTATATGTCCTGATTCTGCAGCCATTGCATGGCTTCCCAATTATTAAGGTCATGTCGTCTTCAGGACGGGATGTGTGTCTCTGACAGCAGATGGCCTTTTTTCTGGGTCAAGCCGCCGGGTCGTTCTCCGACTAACTGTCATGGAACCCACTTGGCAATCCACCAGTAATCCCCTGTTTGTGATCAGGTTTAGCAGTAATGCTGAAGTCATGCAGACACATCAGAGTTTACCAAGCAAATGCAGAAGAAAATGGCACATAGATAACACAGGACAATGAGTACTACAGAGAAGTTCAAATTTGAAAGTTGAAAGGTGTATAATCTATTCATACTTTGATACCTGCAGATTTATAGAATTGTAGCAGTAGGAGAAAGTTCAGTTGAAGAAAAATGATGAACAACGTGAAGAGACTAGTGCTTAGGTAAAGCAAAGCGATGCACAATTTGAAATGGTAAGGAGTGCTCGTCTCTAATTGTGATTTGCAAACTTACATATTGTCGCGGACCCAGCAGCAGCATAACTTCTGGTTTGCACGAATGAGCTGAATGGCTGATGGTATGTATACAGCAGAACACTGGAGCGACCTTATCCTGTAATCTAATTCTAATTGTTCTATTAACAATTTGTCTATGGAACAAAACCAGATGTAGTGCTTCTAGCAAAGACTACAGAGCGCAAGATTGTTGTCAAGTGAAATCCTTGGACCTCCGTGTTTCACATTCAGAAGCTTGATTTCTTCTGATTTGGTGGCAGTTTTCTCCTCCAAGCACCTAAATTTGCAGCCCCAAAACTCAGAAGAGTGCAGTATCCTTCACATGTACAGTAGAGACGCATATTTGCTCCTACACGACTATAACCGACATGTTCCCATGTACGTTGGCAATTCAAACACCATTTTGATTGCAGCTTAACTTCTTTCTTCCTTGCAAAGCCTCCAGTTAGCTTAATGTATGATATCCCATAACTCCTCCAATATCATCTGGGTTTGTTGGTCTATTTCCAGGTTTAGGTAACCATGGAAACAATTTAGTGAGGCCTTGCCTTTCAGAATCAGCATTCTCTTGTCTACCATTGACCCCATATTTCTCCCTCTCAATTGCATCCATAATATCCTCCCGAGCCACAGTATTGCCACCCCTTCGAGCAGCTAGTAACGCAGCCTCATTCACAATGTTTGCTAGATCCGCACCAACCAATCCTGGTGTTAAACTAGCAACCAGATCACAAATTATTTCAGGATCCTCTTCCAAAGGAACGTCCCTTAAATGAACAGCCAAAATATTCCTTCGCCCCTCCAAATCAGGCACACCAACCAAAACTTTTCTTGAGAACCGACCAGGGCGACACAGAGCAGGGTCCAGTGCTTTAGGCCTATTAGTAGCAGCCATGACAATAACTTTCATGTCCGAGTCAAAACCATCCATCTCAGTAAGCAGCTGGTTTAAAGTTTGGTCCCTCTCATCATTAAAACTTCTACCTCGACTTCCACCCACAGCATCAAGTTCATCAATGAAAATTATAGATGGGGCAGCTTCTTTGGCCTCCTTGAATAAATCCCTTACACGGGCTGCTCCTCTTCCAACGAAAACTTCAACAAATTCACTAGCAGAAACAGAGAAAAAGGGAATTCCAGCCTCTCCTGCAACTGCCCTTGCCAGAAGAGTTTTCCCAGTTCCTGGAGGCCCAACAAGCAGAACACCCCTGGGTAATTTAGCTCCGAGCTTCTTGTAGTTCAGTGAACCATGCAAGCAACTCACTACCTCGACGAGTTCCTCCTTGGCCTCATCGACGCCCTGGACATCGTCGAACCCCACTCGCTGCTTCCTCGGCCGGCGCCGCTTCTCTGCGCCGCCACCGGCGGACATCTGCCGCTGTATGAACCACATCATCGGCAGCAGCGACACCCACAGCGTGAGCAGCGTGCTCAGCATGTCCACCAGCAGCCTCCCCGCCGGCCGCGGCGCCGACCGGTAGTCCACCCCGCCGTCCCGCATCAGCCCCAGCAAGAACCCCTCGTCGTGCGGCACCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0265600.1 | 4 | 23307330 | T | A |
| Osa04LNT0265600.1 | 4 | 23306727 | G | A |
| Osa04LNT0265600.1 | 4 | 23308099 | A | G |
| Osa04LNT0265600.1 | 4 | 23308109 | T | C |
| Osa04LNT0265600.1 | 4 | 23308257 | C | A |
| Osa04LNT0265600.1 | 4 | 23308608 | A | C |
| Osa04LNT0265600.1 | 4 | 23309770 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0265600.1 | osa-miR5533 | Cleavage | 4.5 | 20.626 | 1 | 21 |
| Osa04LNT0265600.1 | osa-miR5798 | Cleavage | 4.5 | 17.787 | 1 | 21 |
| Osa04LNT0265600.1 | osa-miR812v | Translation | 4.5 | 14.299 | 1 | 24 |
| Osa04LNT0265600.1 | osa-miR396a-3p | Translation | 5.0 | 13.901 | 1 | 20 |
| Osa04LNT0265600.1 | osa-miR396b-3p | Translation | 5.0 | 13.901 | 1 | 20 |
| Osa04LNT0265600.1 | osa-miR159c | Translation | 4.0 | 17.687 | 1 | 21 |
| Osa04LNT0265600.1 | osa-miR159d | Translation | 4.0 | 17.687 | 1 | 21 |
| Osa04LNT0265600.1 | osa-miR159e | Translation | 4.0 | 17.687 | 1 | 21 |
| Osa04LNT0265600.1 | osa-miR164d | Cleavage | 5.0 | 22.584 | 1 | 21 |
| Osa04LNT0265600.1 | osa-miR171f-5p | Cleavage | 4.0 | 17.647 | 1 | 21 |
| Osa04LNT0265600.1 | osa-miR1427 | Cleavage | 5.0 | 21.357 | 1 | 21 |
| Osa04LNT0265600.1 | osa-miR1427 | Translation | 5.0 | 18.343 | 1 | 21 |
| Osa04LNT0265600.1 | osa-miR1435 | Translation | 5.0 | 11.714 | 1 | 20 |
| Osa04LNT0265600.1 | osa-miR2864.2 | Translation | 4.5 | 13.58 | 1 | 21 |
| Osa04LNT0265600.1 | osa-miR5491 | Cleavage | 5.0 | 10.911 | 1 | 21 |
| Osa04LNT0265600.1 | osa-miR5491 | Cleavage | 5.0 | 8.057 | 1 | 21 |
| Osa04LNT0265600.1 | osa-miR6250 | Cleavage | 4.5 | 15.97 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0265600.1 | 4 | orl1 | Morphological trait | Culm/leaf | S10628 | C377 |
| Osa04LNT0265600.1 | 4 | qChla4-1 | Morphological trait | Shoot/Seedling | C2807 | RM241 |
| Osa04LNT0265600.1 | 4 | qChlab4-1 | Morphological trait | Shoot/Seedling | C2807 | RM241 |
| Osa04LNT0265600.1 | 4 | qPH1-4-1 | Morphological trait | Dwarf | RM241 | C2807 |
| Osa04LNT0265600.1 | 4 | qCCFJ-4 | Physiological trait | Source activity | RM261 | RM3785 |
| Osa04LNT0265600.1 | 4 | qDLR4 | Resistance or Tolerance | Other soil stress tolerance | RM3524 | RM3866 |
| Osa04LNT0265600.1 | 4 | qDLR4 | Resistance or Tolerance | Other soil stress tolerance | RM3524 | RM3866 |
| Osa04LNT0265600.1 | 4 | d11 | Morphological trait | Dwarf | nan | nan |
| Osa04LNT0265600.1 | 4 | nan | Resistance or Tolerance | Other soil stress tolerance | RM5586 | RM3916 |
| Osa04LNT0265600.1 | 4 | nan | Morphological trait | Culm/leaf | RM3337 | RM3785 |
| Osa04LNT0265600.1 | 4 | gpp4 | Morphological trait | Seed | RZ569 | RZ565 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)