© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0265700.1
GACTATGGCGATTTGTGTTCTTCTGAACAGGGTAACACAGTCCAGTTTCAGTTTTACAGTCTCCAGGGATGCTCATCAGCTACAATACTTTTCACCAAGTATACCTTCATTTCTCACTCTCAATGCAAATTACAAGCCACTACCGAATCCAGACAAGCCATTAACCTGCTATAGATGAGTAAAAAAAAGAGAGAGCAGGACATGGAGGGAGGGGGGCAGCAAGAGGAGGGGTGGTGGGGAAAGGGGAGAAATGAGCAACATTTTGAATGAATTTAACACGGCTACCACGACGAGCTCAGGGGCGCGACGCGAAGAGCTGATCTCAAAAAGAAAAGATATGCGGGAGCATGCAGATTCAGAATTTACAGCAGAGGATTCTATAACCCCAACCTCGGTCCCGTCTCAAGCGCCTGCGGTCCGCTTTCGCCATCTTCACAGGGCTGCTGTTCCACTCTGTCTGTAGCACTGGAAATGCGAAGGACCGAGTACTTGTTGTGCTGCTATCCGATCGAAGAGAAATGTTTCCAGAATAAGGTATATGACCTGATGGTGTTAGTGGACCTGATATAATGCTAGGTCCAGAAAAACTTGACTCAAAGGGATTGCGGATAACATTTCGAGCTGTTACTTTTGCACTGTCAGCTTCATTTGGTTGAGCTACAGATTCTGTTTGCATGGTCACTTTTGCACTGTCAGGTTCATTCCGTTGAGCTACAGGTTCTGTTTGCATTGTCATCTTTGCACTGTCAGGTTCATTTTGTTCAGTTACTGGTCCTGTTTGCCGTGTGGAACTCTTACTATCTTTGTTGTCCTCACTTATATTTGTGCCATCGTTTGCTTCTCTTGGGTTGAAATCATGTCCGTCTTGGACACTATCGATCTCGCATTTTGGATCATTCTCACTTTTCGCATCAATAGGCTCTGTCTTACCAGTTAACGGAGATGTACCTGAACTCGTCCCATGTGCTGCATCAGTTCTAATTCCATAAACGAAATTATCCACCTGATCATTTCTATCTTCCGAAGGTTGGACATACGACCTACTTGGACTTGCTTCAGTAGAGTCTAATCTACTGTCTTCATTTCTCGCTCCATCTGTTTCAGTAGAACTAAGTGCCCTGTCAACAGGATCACTCAAACTGTCTGAATTTTCAACAGGACTTCTCTGATCAACAGGAATTTTTCTCTCATCACTCAAAATGTCATCACTTCTTGCTTCATCTTTTTCTTCAGATGCTTGGACATCAGTCATACTTGAATTTTCTACAACAGAATCTAATGTACTGTCTTCTGCAATGGATTCACCAGTTTCAAGAAAATTAAATCCTCGCAGTGCACCATAGACGATATCACTAAAACTGTCTGTCTTTTCGACAGGACAGGGCACTGAATAAACATCATCAACAATTGTAGGTAGGGAGTACTTGGGTTCCCACGTGTCCTCTAATGATCCATATGCGATGAAGGGATTATAGTGATTAATTTGGTTGATTTCTGTCTTATTTAGTGCCACACCAGAAACACCATCTTCAGTCACCACCCCAGAGTGGCCATCAGCAGTTGACTCAACTGATAAACCATTGACGTTAGTGATCGCAGATGCAATACTAGCTCCAGTTTCATGGGAATCATTTGATGGAACCTGATCAACTGGTTCTCCATTGAGATTTGGCCCATGATTTTCACTGCTCTCAGAAACATCTGCACCCATTTGTTGGCAATATTCTGCATTGTCATTACTTACTAATTGTTTGGGCGTCGATTTCTCAACATTTACAACAGTCAATCCATCTACACTACTGTTGCCTTCGAGATCATGCAATTTGCAAGGATGATTTTGTTCCACAGTATCCCCATCAGTAACACATGCTTCGGGCAGGACAACTATTTGCGATTTTAAATCATTAACAGATTTTGCAGGTTCATCTGCTGTTTCTTTTATCCGAATACCATTTGTATCTCCCTTTGAAGAATTCAGGTTCAGTGACACCTTTTCTGCTATAGCCTTCTGATCAGCAAGTACTCCCTCATCAATGCAGACATCCTTAACAAACTGAACGCCATAATTAGAAGAGACCATTATATCTGGCAATTTGATTTCCACAACATCCTTGTCATAAGAAACATCCTCAGGCCGTATCTGGATGGCTTTATCTACATTTTGTTGCCCGGCCTTCATAAAACTATATTCTGATGGATTGGTTTGTTGTACCATTGTATCAAGCAAAATATGTTGTTTAGTTTCTCTTTCAATTTCTCCATCTACTTTAGGGCCGCCATTGGATACAAGCTCATGAAAAACATTACTATGGTAAGGCCTTCCATCATCTCAGAACATATCCCAACGCCATAGTGTGAGATAATGCAACTGTAAAGACTAGAAGCTACACCGTAGAAATAAGATCAGCTCTTTAAAGCCGCACAAACTGTGTATCATCTTTAATCTTCTGTTGATGAATGATGAATAGTAATGTTACGTTCAAAGCAAACCAATCTCTGGAATATCCAATCTTCATGATCTGCATTGTGTGCTTAAGTCCTAGTCATGCCTCAAACAATTTCCTTGAAAATAGAGCTGCTTATTTCCTGAGTTCACTTCTCTCTCTTTCTCTCCCTCCCCGGATAGCACCGGCAATTCACTTCACTTCACCGCGTCGAGCGAAAAAAAAAAGTTTCCGGGAGAATCGCCGGGAGCAGCGGGAGGCCAGGCCGGCGAGGAGAGGAGGAGTGGGATCGCGTCCGCGGCGAGCCCGAGAACCAAAAAAATTCTCGAAATATATTAAAAAGGATTTCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0265700.1 | 4 | 23333330 | A | T |
| Osa04LNT0265700.1 | 4 | 23333633 | A | C |
| Osa04LNT0265700.1 | 4 | 23331163 | A | G |
| Osa04LNT0265700.1 | 4 | 23331627 | A | T |
| Osa04LNT0265700.1 | 4 | 23333164 | C | G |
| Osa04LNT0265700.1 | 4 | 23333172 | C | T |
| Osa04LNT0265700.1 | 4 | 23333933 | T | C |
| Osa04LNT0265700.1 | 4 | 23334441 | A | G |
| Osa04LNT0265700.1 | 4 | 23334666 | A | T |
| Osa04LNT0265700.1 | 4 | 23334679 | A | G |
| Osa04LNT0265700.1 | 4 | 23334919 | G | A |
| Osa04LNT0265700.1 | 4 | 23335285 | T | G |
| Osa04LNT0265700.1 | 4 | 23336174 | A | C |
| Osa04LNT0265700.1 | 4 | 23336264 | T | C |
| Osa04LNT0265700.1 | 4 | 23336373 | G | A |
| Osa04LNT0265700.1 | 4 | 23336418 | T | C |
| Osa04LNT0265700.1 | 4 | 23336580 | G | A |
| Osa04LNT0265700.1 | 4 | 23336638 | T | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0265700.1 | osa-miR5790 | Translation | 5.0 | 18.046 | 1 | 24 |
| Osa04LNT0265700.1 | osa-miR5829 | Cleavage | 5.0 | 16.901 | 1 | 24 |
| Osa04LNT0265700.1 | osa-miR166g-5p | Translation | 5.0 | 13.827 | 1 | 21 |
| Osa04LNT0265700.1 | osa-miR1430 | Translation | 5.0 | 13.419 | 1 | 21 |
| Osa04LNT0265700.1 | osa-miR1862a | Cleavage | 4.5 | 12.449 | 1 | 24 |
| Osa04LNT0265700.1 | osa-miR1877 | Translation | 5.0 | 6.294 | 1 | 24 |
| Osa04LNT0265700.1 | osa-miR2121b | Translation | 5.0 | 14.487 | 1 | 24 |
| Osa04LNT0265700.1 | osa-miR2919 | Cleavage | 4.0 | 12.238 | 1 | 19 |
| Osa04LNT0265700.1 | osa-miR1862f | Cleavage | 4.5 | 12.449 | 1 | 20 |
| Osa04LNT0265700.1 | osa-miR3979-3p | Translation | 3.5 | 12.55 | 1 | 20 |
| Osa04LNT0265700.1 | osa-miR5144-5p | Cleavage | 5.0 | 20.761 | 1 | 21 |
| Osa04LNT0265700.1 | osa-miR5156 | Cleavage | 4.5 | 14.614 | 1 | 24 |
| Osa04LNT0265700.1 | osa-miR5508 | Translation | 5.0 | 13.975 | 1 | 21 |
| Osa04LNT0265700.1 | osa-miR5508 | Cleavage | 5.0 | 12.591 | 1 | 21 |
| Osa04LNT0265700.1 | osa-miR1862c | Cleavage | 4.5 | 12.449 | 1 | 24 |
| Osa04LNT0265700.1 | osa-miR1862b | Cleavage | 4.5 | 12.449 | 1 | 24 |
| Osa04LNT0265700.1 | osa-miR2121a | Translation | 5.0 | 14.487 | 1 | 24 |
| Osa04LNT0265700.1 | osa-miR1862g | Cleavage | 4.5 | 12.449 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0265700.1 | 4 | orl1 | Morphological trait | Culm/leaf | S10628 | C377 |
| Osa04LNT0265700.1 | 4 | qChla4-1 | Morphological trait | Shoot/Seedling | C2807 | RM241 |
| Osa04LNT0265700.1 | 4 | qChlab4-1 | Morphological trait | Shoot/Seedling | C2807 | RM241 |
| Osa04LNT0265700.1 | 4 | qPH1-4-1 | Morphological trait | Dwarf | RM241 | C2807 |
| Osa04LNT0265700.1 | 4 | qCCFJ-4 | Physiological trait | Source activity | RM261 | RM3785 |
| Osa04LNT0265700.1 | 4 | qDLR4 | Resistance or Tolerance | Other soil stress tolerance | RM3524 | RM3866 |
| Osa04LNT0265700.1 | 4 | qDLR4 | Resistance or Tolerance | Other soil stress tolerance | RM3524 | RM3866 |
| Osa04LNT0265700.1 | 4 | d11 | Morphological trait | Dwarf | nan | nan |
| Osa04LNT0265700.1 | 4 | nan | Resistance or Tolerance | Other soil stress tolerance | RM5586 | RM3916 |
| Osa04LNT0265700.1 | 4 | nan | Morphological trait | Culm/leaf | RM3337 | RM3785 |
| Osa04LNT0265700.1 | 4 | gpp4 | Morphological trait | Seed | RZ569 | RZ565 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)