© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0266100.1
TCTGATCATATCATATCATATCATGCTCAAAATTACTTTAATATTGGTCTGTGAATTTAACTGTTTCTCCTATGAGTACTGACTGAATGATCGACGCAGTACAACCACAACAGAAACAACTGAACAAATGAGGCAGTACAAGTGTACAACACGAGAGAAACAGCAGTTCTATTGCTTTTGGCAAGAATGAAACCAAGGACAAAACCAAACAACAACGACTACCAAGGACAAAACCAAAACAACAACGACTACTACCCCCAAAAAACCACGAATTTATTAATTTAGACGCTACTCCGCACCAGAGCAATAGCTACTTGGAAACCTGAGCAGCTGATCGAGAAAGCGTCAGCCGGTGTTGCAGTCGTAGCAGGTGTGGTTGCGGCCGAGGTCCTTGAAGCGCTCGTAGCCGTGGCGGAAGACGCCGAGGCCGAAGAGGACGCCGATGAGGAGGGCCACCACCAGGATCACCAGCAGGTAGCACCCCACCCTCTCCCTGTTGAACTTGAGCTTGCACATGCCTCTCCACTGCACTGCTGCACCCCTCTCTCGCCGGACAGCCCAAGCTGCACGCCCTTTTTATCGGAGAGAAGCCGCTGCATGCACAAGTGTCGTCCTTGTGCCTCTCCTGGATGGCATGGTATCCGCAGTGTCGCTTCAGGGACAAGCTAGCTACTATAGCGAAGCTTGGTGACTGTTTGTACTCTTTGGAGTGATGGGCCTTTTACTACCTTTTTGCCATGCCCGGAATCTTCGGTTGCAGATAGCCAGACGACTGTATGGACTAATCACGGACACATGGACATGGCTCTGCCCATAAAGACCAGGATGATGGTTATCAAGTAGTAGTATTTGCAGTGCATCGTGGGTGAAAGGAGTTAATTCTGGGAGAGCTACATGTGTCGCCTTGCCATTTCTAAATGGGACGATCAGATCATTAGGACATGATAATGCCGTTTGCCGAGCAGTGAGCACGGGATGAATTGGCTGACCAGGTTGCAGAAGTGAATGCGATCGCGACAGCGTACTTGCTTCGATGGGAAAGCAAAGCAATCGGCCGGCCAATCAGGTAAATCACCAGTGCTCGTTGCAACTGCTGTTGGATAGGCAAAGAAGCACGGCGCCCGCAGAATCAAAGGCACAAAAGGGGGAAAAAAGGAAAGGGATTCGAGGGGGTCCAGAGACTGCGAACCGAGCATGAGTTGAAGAGTACCACCAGCAACTTCAATCTTACGTACTCCCTCCGTTTCACAATGTAAGTCATTCTAGCATTTCTCATATTCATATAAATGTTAATGAATCTAGACATCTATATATATTTAGATTCATTAACACCTATATGAATGTGGGAAATGCTAGAATGACTTACATTGTGAAACGGAGGGAGTATCATTTACACGGTTTTAACTTAGGAATTTAGCTACTGCTGACAGCCCAGCAAATCACATGAACAACCTACCAAATGGGGGAAGAATGATTATGATTTATGAAGAAAACAAACTACTAGTAGTATTCCTTTTGTCTTTTGAGATAAGAAAACAGCACCAAAGGCCAAGGTTGAAAGTTCATACCAGACATGCTTAATAGATCAAGACATTTCAAGCACTTACTCAGTATTAAGGCAGAAGAATTATATTAAAATAACCAAACTAACAACATACCACTTAAAATCTCGAAGGTCTGAGAAAAGGCATCGCCCATGTTCATTATGAATGATGTAACCTGATAGACATGAACATTAGGTCAAATGCCAGGATGATTCCACAGCAAGAACTACTGAGATTGGCATCTCTGTTCTAATAGAATTGAAATACTTTTGCACTGCAAGAGCTTCACAAAACAGGGAATAACAAAGCTCAGCGCCCCCGGCCCCGACCACGGCCACGACCGCGTCCGCGCCCACGCCCCAAAGGTTTCCCTGCAGTTGGCTTCTTAGCCTTGACTCTCGGGGTATCCTCTACTAGTAAAGTTTCCAGATTTAAGCTATCAGGGAGGATGTAATAGCGAATGTTGTTTCCTCTCACACTGAGGTGGTCAAGGGTTACAGGATTTTTCCCTTTCAATGTGAGCTTAACAGTCTTCAAGTGGGTGTTCATGCTTATATCCACACCGGTGATGGTTCCGTGGACGACGGTGCCGTTCTTGAGCTCGATGGTGACCGTCTCGTTGTTCAGCTTCATCAGAAACCTGACGAGCTTCATCTTGGCGGCGGGAGGGAGGAGCGGAGGCGGAGGCGGCGACGAGCCACGGGTGGGAATCGGCGGAGCTCGAGCTGCTCGCTTTCTCGGAGCGGGAGGAGCAAAACCCTAATTTGATCTGGCCAAGACGCCAAAGCTGGTCTTGTTGGCTAACTTGGGCCGTTATTGGGCTTCATTTTC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0266100.1 | 4 | 23497015 | A | G |
| Osa04LNT0266100.1 | 4 | 23497764 | A | G |
| Osa04LNT0266100.1 | 4 | 23498256 | G | A |
| Osa04LNT0266100.1 | 4 | 23496516 | C | T |
| Osa04LNT0266100.1 | 4 | 23496851 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0266100.1 | osa-miR535-3p | Cleavage | 5.0 | 23.603 | 1 | 21 |
| Osa04LNT0266100.1 | osa-miR1428a-3p | Cleavage | 5.0 | 11.004 | 1 | 21 |
| Osa04LNT0266100.1 | osa-miR1436 | Cleavage | 2.5 | 15.695 | 1 | 21 |
| Osa04LNT0266100.1 | osa-miR1439 | Cleavage | 3.0 | 18.137 | 1 | 21 |
| Osa04LNT0266100.1 | osa-miR1857-3p | Translation | 5.0 | 24.84 | 1 | 21 |
| Osa04LNT0266100.1 | osa-miR1320-5p | Cleavage | 5.0 | 18.207 | 1 | 21 |
| Osa04LNT0266100.1 | osa-miR1320-5p | Cleavage | 5.0 | 18.424 | 1 | 21 |
| Osa04LNT0266100.1 | osa-miR5510 | Translation | 4.5 | 20.98 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0266100.1 | 4 | d11 | Morphological trait | Dwarf | nan | nan |
| Osa04LNT0266100.1 | 4 | nan | Resistance or Tolerance | Other soil stress tolerance | RM5586 | RM3916 |
| Osa04LNT0266100.1 | 4 | gpp4 | Morphological trait | Seed | RZ569 | RZ565 |
| Osa04LNT0266100.1 | 4 | nan | Morphological trait | Culm/leaf | RM3337 | RM3785 |
| Osa04LNT0266100.1 | 4 | qCCFJ-4 | Physiological trait | Source activity | RM261 | RM3785 |
| Osa04LNT0266100.1 | 4 | orl1 | Morphological trait | Culm/leaf | S10628 | C377 |
| Osa04LNT0266100.1 | 4 | qPH1-4-1 | Morphological trait | Dwarf | RM241 | C2807 |
| Osa04LNT0266100.1 | 4 | qChla4-1 | Morphological trait | Shoot/Seedling | C2807 | RM241 |
| Osa04LNT0266100.1 | 4 | qChlab4-1 | Morphological trait | Shoot/Seedling | C2807 | RM241 |
| Osa04LNT0266100.1 | 4 | qDLR4 | Resistance or Tolerance | Other soil stress tolerance | RM3524 | RM3866 |
| Osa04LNT0266100.1 | 4 | qDLR4 | Resistance or Tolerance | Other soil stress tolerance | RM3524 | RM3866 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)