© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0267600.1
GAACACAGGAATAACACCATGGGAGTAGCTTTTATTTGGGGCAATATAGTGACGAGAAGCATACGTAGCAGTGACATGCCACAGTTGCATTTCTTCGAAACGAAGAGCAGCGGAAAGCTCTTCAGAGCTTCGAGATGAGGCCGTTCTGGATGGCTTTGGGCGACTCGGCTTCCTTGATGTCAGCGTCGGAGGAGCCGGGAGGCACGTCGACCGCCGGCGAGCAGTTGAAGAACCCATGTGGCATGAGCATGAAGCCGATGCGTTCCACTGGCATGACAGGCCAGTCCTCCAGCCTTGGGATATGGGTGAGCCCAAACACATACCAGAGAACAATGTCAGTTTCCTCCAGGGGCCTATCCTTCTTGACCCAGGTAGCTAAGCCCTCGTGGATACGTGGATTCTGATTGGGGAACTCCCCTCCAGGGAACACCTCGTCGCTCTTGTACTGCGTGACCCAGAGATTGTGCTTCAGGAAACCCGCTCTCCTCAGAAACTTTGCCTCGGGTAGAGCCAGCGGCAAACAGTTTGAACCAGGCACGAGCCTGTAGCCGGTTGGCTGCCCAGTACGATTAACAGCCCTTGTGTTCCTTACGATCCAATGCCGTGCAGATGAAGGGTCACAATCTCGCATTGCTTGCAGCTCAGATTTCAGTAGTTTTTCCTCGGCATAGAAAGCGTTGTTGTGCACATTATGTGTGCCTGCATTTTCAACTTTCACATTTACCTCAACCACCTGATTATGAGCCTCGTTAGGTTTACAATCAACAGCCATGTCCATACGGGCAACAAAAAAGTGTTGGTGAACAGGTGCATACAGACCAGGAGCAATGGTTGTACCATATTTTCTTGATTCCCCAGGCATCAGAGCTCCCAAACTAAGAATTCCAGTAAGTTTTACTTCTGCTTCTATCTTGCCATCCTGATAAAAGTGCCAGTAAAAACCATATTCATAGTTGGCAACTGTGCAGATAAATGAAACAGTAAGCCTCCTTGACCTCCTAACTTCTGCTAAACCAGTTCTCCAATCCTGGTGTTTCCAAAGGATTCCGTGGTCTTCCTCATGCAAACATACACAATTCTCAATTGTTTCCACACCACCCGTAAAATTCGTGAAGTGTGCATCAAAATACTTTATGAAACCTAAACAGTCACATCCCCTCTTAAGAGAATGAGCATTCTTCCCAAGTCCATCTTCTCCAGCATCAAAAGCATTCTTGCGATAATGTGGTTCATTGGGATCTCCATAAGGAACAACCATCTCAACAAAGCTGAGCCTATGAGCTATCGGCCGACGTCCACGGCTGCCATCAACATATGCAACAGAATAGATGACCAAACCCTCTTTAGGGGTGAAGCCAATACGGAAGTTCCACTTCTGCCATTCCACAAAATATCCGTTAATGCGGAAGCTCGGGCCCTCAGGTTGATTGATAATAAGAGGTTTCAAATCACTTCGATCAACACCACCTCTCGTTTCCCCAGGAGTGTAGTTTCTCAGATGATCTGGTGGGGGGAGAGGAACCAACTTCCTATCTTCAAATTCTATGACAACGTTATTCTGCATATCAACAATAACATGGATCCCTTCCACAGGACGTGCATAACCATTCTCCATGGGACTATCACTGTCAGTTCTGCAAAAGATTAGAGGCTTGCCAAGTCTGCGGCTGGGAGCATCAGCATCACTGTAGTAGCCAGCACACCAGGCATCTACCATGACAAGTTCCATGTCATCTACACCTCTTCTCTTCATAGCTTCAATAAATGGAGGATAGCTTTTGACAGTAGCTTCACATTCAGCATACTCCATAGCATCCATTGCAGGCTGAACTTCTGGAACAACTTCAGATGATATCACTTTCCCTCTGTGATGTCCACCCCTAGTAGCCGCATGCACCTCAGAGAGTTCTACTATCCAAATGCTAGTCTCATTTGATTGTCTATTGTAGACTGTGAGCTTGGCCCTCCTAGGGGGCAACCTGCTTGGAATGACAGCAGAGCCTTTGGTTCTAGGAAGCAGTGATGGTTGGAATGGTGGGAAAAAGTAGGCATCAGCTAATGCCACGACATTCTTTTCTGGCTCCAATAGCACCACTTCAACAAAACGCATGCCATCACGTTCCTCAGGCGATTTTCCAGCAGCTCTTACAGTTGCTATAGCCACTGCAATTTCAGCAGCAGATAATGGATCTAAAGGGTGGCTTCTCTGGGCTCTGGTCATTATAGGTATCCCTTTCGAGGAGACCTTCGCGGTGGTGGGCTGGACCGCGGCGGCGATCTCCTCCATCACGGCGCCGCCGCCACCCCCGGCCGCCGCGGCGACGCGGGGATCATCGCCCGAGACCATGGAGACCTTCCCAGCAGCAGCAGCAGCCGCGGGCGCCGCGACGATCGCCCCGCGTGACGACGACCCGGGGCCGCCGTCGACGCGCCGAGCAGCCGCAGCGCCGCCACCGCCGCAGCAGACGACGACCGGCGCCTTTTCCTGAGTTGCGGCCATTGGAGCGGATTCGCGAGCTGACCGTGTCCGTATTCTCCGCCTCCGCCTCCGCCTCGCCGGCTCACACGATCTGACATACAGCACAGGCCTCCGCCCTCCCGCGCGCCTTCGTCCTCCCCTCCCCTCCCCTCCCCCCACCTCCCGCTTCCTCCTCCTCCGGCTTCTGGGGTTTCTACGGGCTTAGGGCTACCGCGAACCCTAGGACGAAGGGGAAGGACCAGGCCGGCCTCGTGCGTTTCCTCCTCCTCCGCGAGAGAAGCCGACGAGGAATGGGGAAGAGAGAGAGAGAGAGAGAGAGAGAGAAGCCGGTGGCGAGTTTGGAATGGTGGTGGTGGCGGTGGAGGAGGAGGAGGAGGAGGAGACGGGGGCTTTGGGTTGTTTTGGAGGGCG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0267600.1 | 4 | 23830082 | A | G |
| Osa04LNT0267600.1 | 4 | 23830314 | A | C |
| Osa04LNT0267600.1 | 4 | 23831009 | A | G |
| Osa04LNT0267600.1 | 4 | 23831145 | A | C |
| Osa04LNT0267600.1 | 4 | 23833704 | G | A |
| Osa04LNT0267600.1 | 4 | 23834371 | T | C |
| Osa04LNT0267600.1 | 4 | 23834802 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0267600.1 | osa-miR6252 | Translation | 5.0 | 8.624 | 1 | 23 |
| Osa04LNT0267600.1 | osa-miR159c | Translation | 3.5 | 13.581 | 1 | 21 |
| Osa04LNT0267600.1 | osa-miR159d | Translation | 3.5 | 13.581 | 1 | 21 |
| Osa04LNT0267600.1 | osa-miR159e | Translation | 3.5 | 13.581 | 1 | 21 |
| Osa04LNT0267600.1 | osa-miR1858a | Translation | 4.5 | 12.759 | 1 | 21 |
| Osa04LNT0267600.1 | osa-miR1858a | Cleavage | 5.0 | 11.058 | 1 | 21 |
| Osa04LNT0267600.1 | osa-miR1858b | Translation | 4.5 | 12.759 | 1 | 21 |
| Osa04LNT0267600.1 | osa-miR1858b | Cleavage | 5.0 | 11.058 | 1 | 21 |
| Osa04LNT0267600.1 | osa-miR2925 | Translation | 4.0 | 17.906 | 1 | 19 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0267600.1 | 4 | qPH1-4-1 | Morphological trait | Dwarf | RM241 | C2807 |
| Osa04LNT0267600.1 | 4 | qCCFJ-4 | Physiological trait | Source activity | RM261 | RM3785 |
| Osa04LNT0267600.1 | 4 | d11 | Morphological trait | Dwarf | nan | nan |
| Osa04LNT0267600.1 | 4 | nan | Resistance or Tolerance | Other soil stress tolerance | RM5586 | RM3916 |
| Osa04LNT0267600.1 | 4 | nan | Morphological trait | Culm/leaf | RM3337 | RM3785 |
| Osa04LNT0267600.1 | 4 | qChlab4-1 | Morphological trait | Shoot/Seedling | C2807 | RM241 |
| Osa04LNT0267600.1 | 4 | gpp4 | Morphological trait | Seed | RZ569 | RZ565 |
| Osa04LNT0267600.1 | 4 | orl1 | Morphological trait | Culm/leaf | S10628 | C377 |
| Osa04LNT0267600.1 | 4 | qChla4-1 | Morphological trait | Shoot/Seedling | C2807 | RM241 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)