© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0267800.1
GGAACGAATTTGATTCGCTGAATGCCACAAAAGATAATACAGGAGTGTAGTATACTTCAGCCATTAAGATGGCAGTTTCAAAAACGATAACGTGTGCGCCTCGTCTTTTTAGATTTACACAAATGTTTCCACAATTTCTTTCTTGGTGTCTACCATCGAATCTGTTTACAACGAGGAGCGAGAACAGGATTGTCAGCCCTGAAAGCAGCTTCTTCGGCTCGAGATTATACTCAAGGCTCATAGCTCCCAACTTTTCTTATAACCAATGCACACTAGCAAAGAAGGTGAGAAGTGGTCAGCGTGCAGTGATAGACTGATAGCTAGCTTTAAAACATTGAAGAATTGAACTGTACTACTACTAGTACTAGTAACGATTCACGAACACCTTTGGTAATGTTGGCAGCACAATGGAACCTTACAAATTACCATTTCATACATAATACAAAGTAACTTGCTCACAATGAGAATTCCTAAAGAGATATATACAGCCTACGCAGGGATAGAGCTTCTACTAGGCTAGCAAGATCCGTATGCTCTCACCCGACCCCCACCCCAATGTTTGAAGATTTTTATGATTAGTACTTCATATATAGTACATAATTGGGTGCATTCTCTTGTTAATTCCTCCATCTACTTAATTGATTTTATTATTTTTAGAGATATTTAATTGTGAAACAAGTCGCTGCGATTAGAGTGTAGAAATCAAGAATATATAATGAAGAAACATAAGTATGCGGTAATGTTGTAATTTAGTATAGATGCTTTTGTTTTAGAGCTGCTGTACTCATGTATTGCTTAGTCATGTGTTTTGTATAACTCCAATGTCTATAAATTCCAAAGAACCGCAATCTTATTTTGGCCCCTCTTGAGATTTATTAGTTCAAGCTCCACTATTGTGTGTATTGCTTAACAGCAAAAATAATTATCAGCAAAGACAATGCCCTTATAATGCATTTTAAACAATCGCATGCATACAGATAGTACAACAAAGATGGGAGTTTATCAAATGGCTGATTCTATCAAATAATTACACTTACAGTCAAGGAATAATCACTATAATAAGGAAATAGTGCAACAAAATGAGCAGCCAAAATAGTTTGGCAATTTGGAATGAACAAACAGAACCTTATTGCCTTAATCTTATCAGAGTAAGTAACAGGGTAAGTCAGCAAGCATATACCTTGTTGTTGCTGAGAACAAATCACTGTCCTTATTTCAATCCAGCAACCTTTTTCCTGAGCAATGTATTCTGTTTTTCCTGATCGAGCACGCGTTCGTTGGTCCGCTCAACCTGCCGAGCAAGCCCCTCCAGCTTCCTTAGCATCCCACTGTACATCTCCTCCATTTCGGAGGTCAGCGCAGAGGCCGAGGTCACCATTGCCCCTACCCTCTCCAGCCCGAACCCTTCTACCATCCCATCAAGCGCCTTCTGCTCACCAATGCTGTAACCCTGCTTTACAGGCTGCTCCGGCAGCGACGGCAACGGCGACTCCGGCGCGAAGGCGTGGTACTGCTCCCTGAATCCGGGCCCAGCGTTGACGACGCTGAGGGAGGCCGGCACAAGGCGGGAGTCAACGAGGAGGAACGCACGGTAGTCGAACGAGTGAACGGAGAGGCCAGCGGCGGAGGAGGATGGTGCCACGAGGAGGAAGACGAGCGGGTGGGCGAGCACCAGGGTCTTCGAGAGGGAGCGCGCGAGGGCGGCCTCGCGCATGGAGGGGCGCAGCGGCGAGCGGCGGCGGGAGGAGGAGAAGAAGCCGATGGCGGCGGAGGGGTCGGGGGAGTAGGACGACCTGGTGAAGCGGCCGAGCGGATCGGCGAGGGAGGAAGGCTGCGCGACCGAGGCGTGCCCCACGACGGAGATGGAGAGGGAGGGGCCCGAGGAGGCGCGGGCCTGGTCGTCGTCGTCGTCGTCGTAGAAGGACGGGGGAGCCGCGGCTGCGCGGCTAGCCACGCCGAAGAGGAGCCCGTCGGAGTCGCCGTCGGCCGAGCCGCAGCAGGCGAGCAGCGCCGCGAGGGCGGCGCCGGAGACGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0267800.1 | 4 | 23968453 | G | A |
| Osa04LNT0267800.1 | 4 | 23968787 | A | T |
| Osa04LNT0267800.1 | 4 | 23968955 | T | C |
| Osa04LNT0267800.1 | 4 | 23970525 | T | A |
| Osa04LNT0267800.1 | 4 | 23971318 | G | A |
| Osa04LNT0267800.1 | 4 | 23971652 | A | G |
| Osa04LNT0267800.1 | 4 | 23971978 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0267800.1 | osa-miR5079b | Cleavage | 4.5 | 18.286 | 1 | 22 |
| Osa04LNT0267800.1 | osa-miR167a-5p | Cleavage | 4.0 | 19.231 | 1 | 21 |
| Osa04LNT0267800.1 | osa-miR167b | Cleavage | 4.0 | 19.231 | 1 | 21 |
| Osa04LNT0267800.1 | osa-miR167c-5p | Cleavage | 4.0 | 19.231 | 1 | 21 |
| Osa04LNT0267800.1 | osa-miR164c | Cleavage | 4.5 | 13.8 | 1 | 21 |
| Osa04LNT0267800.1 | osa-miR167d-5p | Cleavage | 4.0 | 19.231 | 1 | 21 |
| Osa04LNT0267800.1 | osa-miR167e-5p | Cleavage | 4.0 | 19.231 | 1 | 21 |
| Osa04LNT0267800.1 | osa-miR167f | Cleavage | 4.0 | 19.231 | 1 | 21 |
| Osa04LNT0267800.1 | osa-miR167g | Cleavage | 4.0 | 19.231 | 1 | 21 |
| Osa04LNT0267800.1 | osa-miR167h-5p | Cleavage | 4.0 | 19.231 | 1 | 21 |
| Osa04LNT0267800.1 | osa-miR167i-5p | Cleavage | 4.0 | 19.231 | 1 | 21 |
| Osa04LNT0267800.1 | osa-miR167j | Cleavage | 4.0 | 19.231 | 1 | 21 |
| Osa04LNT0267800.1 | osa-miR443 | Translation | 5.0 | 11.176 | 1 | 22 |
| Osa04LNT0267800.1 | osa-miR1846c-3p | Cleavage | 5.0 | 24.2 | 1 | 21 |
| Osa04LNT0267800.1 | osa-miR2100-5p | Cleavage | 4.5 | 16.2 | 1 | 22 |
| Osa04LNT0267800.1 | osa-miR2872 | Cleavage | 4.0 | 10.887 | 1 | 21 |
| Osa04LNT0267800.1 | osa-miR2929 | Cleavage | 3.5 | 17.947 | 1 | 21 |
| Osa04LNT0267800.1 | osa-miR5079a | Cleavage | 4.5 | 18.286 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0267800.1 | 4 | nan | Morphological trait | Culm/leaf | RM3337 | RM3785 |
| Osa04LNT0267800.1 | 4 | gpp4 | Morphological trait | Seed | RZ569 | RZ565 |
| Osa04LNT0267800.1 | 4 | orl1 | Morphological trait | Culm/leaf | S10628 | C377 |
| Osa04LNT0267800.1 | 4 | qChla4-1 | Morphological trait | Shoot/Seedling | C2807 | RM241 |
| Osa04LNT0267800.1 | 4 | qChlab4-1 | Morphological trait | Shoot/Seedling | C2807 | RM241 |
| Osa04LNT0267800.1 | 4 | qPH1-4-1 | Morphological trait | Dwarf | RM241 | C2807 |
| Osa04LNT0267800.1 | 4 | qCCFJ-4 | Physiological trait | Source activity | RM261 | RM3785 |
| Osa04LNT0267800.1 | 4 | d11 | Morphological trait | Dwarf | nan | nan |
| Osa04LNT0267800.1 | 4 | nan | Resistance or Tolerance | Other soil stress tolerance | RM5586 | RM3916 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)