© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0268000.1
CAGAAGCATACCCACATATGCATGTACACATTGTGACTATCACCAAGATTTAAATGTGAATACAATCTGTTTGCTCACATAATTGTTTGTACAATCATGTACACTTACAAAAAAGTAGCAATGACAGAGGACAATGGATCTTACATAATGTGGAGTATAGGTTAGAAAAAACAACAATCATTAGGTGATATGAGAATTGCAGCATTTTCTCATAGATACCTTCGTCATGAACTAATTGAATCTTTTCTCATCTATAGCACTGCAGCACAAAGAAAAATTTAGTGCTTTAGCTCAATAAAAACAACAGTACATCACTTACAACAGATTAGTAGACGATTGGTACCTCCTTTGCATAATGGCACAGAATTTTGAGGTATCCCCTACAGAATACAGGGCATCTTTGGATGTCATCCATATATTGCTACACAATGAGTATATAGTAGGTAGTACAAATACTCATATAAGAAACCGTGTTGAAATATCTCTGTAGCTTTGGAGAAGGGGCAAACATAACATTTCATGAATTAAAAAAAGTTATAAAATCATATTTTGAAGTCAGCTTATAATGAAAACTCTATAAGTATATTTGCAAAGAAAAAATTCAATTGGAAGGATGGGTTATTAGAAAATTCCAAAACAATGCAGCGCTGAAAAAAAATGAAAGTAGGAATAATGCTTGTCAAGAAAAAATTACACCCCAGTGTGCCCTATTGGAACATATGACATGTCTCATGTAAAATTGTTTGAAGTGCATGTCACTTCGTCACACACAAATAAATTGAAATAATACTTTATGATCAAAGCAGAAAAGAGAATAACACAGTACGTAAAGCTAGAGATACTAAGGGTTGGATTCTTTGGAATAGCACATATGTATTGTTAATCGGTATGGACTACACAGATCAACCGATAATGGAACTATGCAGGTTACAACTCAGAAGTACCTGTGGCTTTAATTCTCTCAGGCAACCATGGTTTCAGTGTCACTGAAACACCCTGCAAACAACGCTAACCTATGAAATCAATGTTCCATTAAATATTAAACAATAGTAGCAGATATAGAAATGACTCTAGCACAAGAAAAATGTTAGCTAATATACATAGGGCCTGCACTGATTTTAAAAATGTAGTAATTGCGGTCTAGTAAAGTTCACAAATACTGAAATCTTCAATCGAACCAAATAAATATTTGTTCGCTAGATGTACAACATAACCTGTGATTAATGCCTTGACTTATAGACCCAATATTGACCCAATGTATTGGTTACAATATGATTCGTAGAATAATGGAGCTTCCTCCAGATAGGAGGCTAAAAGACCCGCACCATGAAATCATATCATTACCTTAATATCGGCACAATTATCTGTCTATACTGAGCCCTAAAGACCCTGAGGTTTGTCTCATAGAAAATTAACTGCATGATCCAAATATAAGGGTAATATGCCAAGATTGTCAGGCTTACAGTGAATTTTCTGATGATGTATGCATCACAATAGCCAATATAAGTTTGTCGACAAAGAATACCATCAATGCAAATGCGTATGTTACCATTATGTGTACTGAATTAGCGCACGACGAATTAACAAATAAAATATGATTTGTTGGAGAAGGAAGGAAATTGAGGCAAAACCTTCCGATAGCATAAACATGATATGCTATCGTGGAACTAAACCTAAATTATCTGATAAGAAATATGAAGACCACATATATCATCAAAAGAAGACAATAAGAAAACATTCATACCTAAAAACAGAAGCATAGAAAGGTGGCAGCAAGAAAACTCATTGACATGCCCACAAAATATTATTACCAGTATTGTACAATGAAGGAATACTGACATTACTTCGCACTCATTAACATTTACAGGAAAAGGACAACTAAGCAAAGAACATCAAAACTTGAACTCTCCAACTAACTTTTTATATTTTGAAGTATATATCTTGGGAAAAAAATCACATCTGCCATGTAGTACTATATCATATACATTTATCTACAATCCCTGAATGAGCGTAATTGATAATAATAAAAAAAAGGTTTTTTTAAGTATATATTCTTGTAGACCAATTTGTTAAGATTCCAGAAACAATTGGCATATATATGTACCGATGTACATCAGGATTTCATTATGAAGGATCATGTACACATCTTTAACCTGTACATTTCTGGTAGTTGACATAGATGGTGCACTGTCATCTTCAATATTTTATCATTATTAGTGAAAAGTTTTTTACGCAGAGTTAGCTGGCATAAAAGTTATACGACATTATAATTAAAAAGTTGCAGGAACAAATGTATTTGAGAATAAACTTAGATTTGCCACTAAAAATTTTACCAAGCACATAGAAGGCTTTTGTTAAAGAGAGAAATTTTACTGGCGTCAGCCTAATCATTTCTTCTCCTTATCTCAGAAGCCCGCATAGGAGCCAATCAGCCGAAGAGAGCAAACTGAAAAGAAAGAAATTCAGCAGCATACCTGAACGACTATGGTGTTATGTGCGGTGACAACGGAGGAGCAGATTGCTCCCAGCGCGGCGCAGGCCTTGATGTGGGCTTGGATGCCGCCATCGCTGCCACCAGCATGAACAACACATGCGGCCATGGCATCTAGTGGGCCATCGTAGCAGGCTATTGGTGAGGGGCACAAATGCTGGACGGTGATGTTTAAACTTTAGTACTGAATAATCTAGCATTCTAGCCTGCACTCCCTTTTTTCTTTCCTTCCTACCAATCATGTGAAACTCATAATGAGCAGCAAGTCAAGAATAGAGATCAGGGGCTAGAACAGATATGTATATATGCATATAATAGGGATTTAAGTAGTAGTGTACCAAATTGTGTCTGCTGATGGCTTCAGCAGAGGAGTAGAACAACAAATATGGAATCAGCGCAAGCAAGCAGGCTGGATCGATCATATATATTGATTAAGAGGATTAGGCAAAGGGAGTGTAAAGTTGACCTGGGGAGGAGTAGAATGCGTGGTAGCAGATCGTCAGGTCGCCAGGTCGCAGAGGTGACGAACCAGTCCCGGCAACTCCCTGCGGCGAGAGGGCGCGGCCGGGGAATGAGATGGCGCTTCCGCCATCCCGCGGAGAGAGGGCGAGTGAAAGGAGACGGCGCCACCATCGTCTTGCAGCGAGAGGGCGAGGCGGCGGCACCAGCCATCAGGCGTGGGGGTGGGGCG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0268000.1 | 4 | 23985960 | T | C |
| Osa04LNT0268000.1 | 4 | 23986121 | G | A |
| Osa04LNT0268000.1 | 4 | 23984461 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0268000.1 | osa-miR5537 | Translation | 4.0 | 11.558 | 1 | 22 |
| Osa04LNT0268000.1 | osa-miR5537 | Translation | 4.5 | 9.683 | 1 | 22 |
| Osa04LNT0268000.1 | osa-miR5830 | Cleavage | 5.0 | 15.34 | 1 | 24 |
| Osa04LNT0268000.1 | osa-miR6256 | Translation | 5.0 | 12.664 | 1 | 22 |
| Osa04LNT0268000.1 | osa-miR397b | Translation | 5.0 | 9.641 | 1 | 21 |
| Osa04LNT0268000.1 | osa-miR397b | Translation | 5.0 | 12.806 | 1 | 21 |
| Osa04LNT0268000.1 | osa-miR167h-3p | Translation | 4.5 | 11.613 | 1 | 21 |
| Osa04LNT0268000.1 | osa-miR169f.2 | Cleavage | 4.5 | 21.451 | 1 | 21 |
| Osa04LNT0268000.1 | osa-miR435 | Cleavage | 4.5 | 20.572 | 1 | 20 |
| Osa04LNT0268000.1 | osa-miR530-5p | Translation | 3.5 | 10.301 | 1 | 20 |
| Osa04LNT0268000.1 | osa-miR529b | Translation | 4.0 | 22.74 | 1 | 21 |
| Osa04LNT0268000.1 | osa-miR1425-5p | Cleavage | 4.5 | 16.555 | 1 | 21 |
| Osa04LNT0268000.1 | osa-miR1428b | Translation | 4.5 | 8.398 | 1 | 21 |
| Osa04LNT0268000.1 | osa-miR1428c | Translation | 4.5 | 8.398 | 1 | 21 |
| Osa04LNT0268000.1 | osa-miR1428d | Translation | 4.5 | 8.398 | 1 | 21 |
| Osa04LNT0268000.1 | osa-miR2090 | Translation | 5.0 | 13.294 | 1 | 22 |
| Osa04LNT0268000.1 | osa-miR2094-5p | Translation | 4.5 | 18.342 | 1 | 21 |
| Osa04LNT0268000.1 | osa-miR2099-5p | Translation | 3.5 | 18.645 | 1 | 22 |
| Osa04LNT0268000.1 | osa-miR2099-3p | Cleavage | 4.0 | 13.191 | 1 | 20 |
| Osa04LNT0268000.1 | osa-miR2866 | Cleavage | 4.5 | 9.19 | 1 | 20 |
| Osa04LNT0268000.1 | osa-miR5487 | Translation | 4.0 | 13.944 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0268000.1 | 4 | qChla4-1 | Morphological trait | Shoot/Seedling | C2807 | RM241 |
| Osa04LNT0268000.1 | 4 | qChlab4-1 | Morphological trait | Shoot/Seedling | C2807 | RM241 |
| Osa04LNT0268000.1 | 4 | qPH1-4-1 | Morphological trait | Dwarf | RM241 | C2807 |
| Osa04LNT0268000.1 | 4 | qCCFJ-4 | Physiological trait | Source activity | RM261 | RM3785 |
| Osa04LNT0268000.1 | 4 | d11 | Morphological trait | Dwarf | nan | nan |
| Osa04LNT0268000.1 | 4 | nan | Resistance or Tolerance | Other soil stress tolerance | RM5586 | RM3916 |
| Osa04LNT0268000.1 | 4 | nan | Morphological trait | Culm/leaf | RM3337 | RM3785 |
| Osa04LNT0268000.1 | 4 | gpp4 | Morphological trait | Seed | RZ569 | RZ565 |
| Osa04LNT0268000.1 | 4 | orl1 | Morphological trait | Culm/leaf | S10628 | C377 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)