© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0268100.1
CCGGCAGATTCGAAACTTAGAACAAGCCCAAATTAATTGGCACAAACAACACACGCGAGATGCAGTAATTCAGAGCTAACACACGCTTGCGGGAAGCAATAATTATCCACAGCTAAGAGCCTGAGAGCAGCATAATCTGCTCGAAAGAGCATAAAAATCACACTGAAAATGGAGGTTCAGGAAGCTCTGTACAGAATCTCAATGTTCCTGAGGTTGTCCTGGGACGAACCGTGAGAGAGATCAAAGGCCAGGAAGCCATCATCTGTGTGTTTGAACTCTACTTCATGCTCATCAACACTGCAAATTTCCGGCCTGGTTGCTGAATACGCCCCAAACCGACCTGGCCCTCGGCATTGGATCTGAATTGTGATCTCTGAACAATCACCTGTGCTCGTGACGTTTTCGAGCGCACCACCTGAGTTGTACATGTTAACCAGTCCAAGAGGAGCAAACTGAACAAAGCCACCAAAAACCTTTATCAGCGCTATGGTATATATCTTACATGTCATAGTAGACAAGGAAACCTCCATAGTCTGATGCTTCTGAAGCCTTGAGAGAGAACATGAATTAAAAGCAAATACTGCAGTCTCTCCGTTCCAATCATCCCCAGCTATCTCCTCAAGTAACTCCACATCTGATGGGGAGAGATCACCAGTGATGCAGACGGTAGTGGGAACATGAGCATTTTCTTTCACTGGATAAGTCCAATTTCCAGCACCCTGACAGTTAAACACTCCGATGACTCCAGAAAACTTGTTCAAGTTCCATATTTTCAACAGACTTTTGCCATCCATGACAGGGTCATTGAACAGGCAATCGCGAGTTGGACGACCAGCATGCTTTGTTCTTAGAATCAAGCCATCTGGCAGAACAAGTTTTTTAAGAACACTGAAATCATGCATCCCTGGTTTGTCGCTGACATAAACACCACCACCACTCAGAGCCCTCGCAGCTCCATGAAATTCTGCTGATTCATGCTTACTATGAAACATATCCCAGTCAGGTATGAAAATTTCTCCCAATAAAAGGCTATTGAATGCCACAGTAGCAATGTGCAGGGTTTGCATCGTTGGCTCCCGAGGCATGAAATCTTCTGATGCTCTAGCAACTGCGCTCTTCAATGAACTAAAAATGCTGTCTGTATTGTGACTCATGCAGCAAATTAGGTTGTTTCCTTTGAAGTTCCGAGCGATAGATTCCTCAAGTGCTTGTTGATACTTCTGAGTTAATGCAACACGACCACCAAAACCCTTCCCAAGAGTCTCCATCACATTCTGCACATCTACCTTCACACCATCCACACCCACACTAGAAAGGTAGCTGTGCTGATCATTGTAGAAGTCATATATCATGGCAGGATCAATGATACCCACTCCAAATTTCTCCAAGCTGTCCATAGCTATATCCCTCAAATTTGCAACATTACCGGGAGACTGGACTGGGTAAACTAGCTGTGGATTGTACTTCTTCATCGCATCAGGTGTTGTGAGGACACCACCCCAATACCCATGTAAAGCATGCCATATGTAGACATACTTGACTCCATAGTGCTCTTTGATTTTCTTGACATGGTCTCCAAGATTCTTGCAGGTTTCTCCCCTAAACTTATCGTTCTCTGTCAGATCGATAAGTCTCTCCGCAAACACAGTCTGTTCAATAAAGGCCTCATCCACTTCCTTGAATCCGTTAACGGTTTCTTGCCAGCCATCGTCTATAATTAGAAACCTTGGTGGTGCACCTCCTTCACACAAACTTTTAAGGCCCTCTTCAATTCCCACTGGGTTGACAGATTTATAAAAAGCATCCCAAGTGCACCACCCAAACCAGTCCAGGTTTGCAGGGATCTCTTTGTCCTCTATATGACTGAAAGTTCCTTTGATCTTAGATAACATCTTGATTGATTCCTTCATAAGCTTGAAAGGGTTGTCCCCTGAGTTGATGAATACAGCATCAACTGCTTCCAGTGTCTGAACCTCAGGATCACCGCTCTCGAAGCAAAATTGGAGCTCATTCTCAGGACTCCCCTGGAGGCTGGCTCGGAAGCCGCCGTCAAGAACCGGCAGCATGAGCGCGTACAGCGCGGCACCCGCCTCGCTCCTCGACTCCAAGAGCAGCATCTGCGTCTCCGCTGGCACGCCGGCGGCGTCCTCGCCCACCGTCGGGATCATCCACCAGATCTTGAACCTGAACAGGGACAGCCACTTCCACCCACTGGCGAGGGTGCCGAGGGAGAACACGTGGCGGCTGGACGGGGCGGGCGCCGTGGCGCCAAGGAACGCGGCGCCCCCCGGGGAGGCGACGACCGCGGGGCGGCGGAGGGCCACGCTGGGAGGGGCCCGCTCCAGGAGCTCCCGCCCGCCGACCACCAGCGACCCGCGCTCCAGCCGCGCCATCTCCTCGCTCCGCGGGCACGCGACGGCGGCGGAACTGAGGCTGGGACGCGGCCACGGCCGGCATTGCGCCGGGACGAGGCCGCGGGGGCGCGAATTATTCCCGCGCGAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0268100.1 | 4 | 24070364 | T | G |
| Osa04LNT0268100.1 | 4 | 24070401 | C | T |
| Osa04LNT0268100.1 | 4 | 24070481 | A | T |
| Osa04LNT0268100.1 | 4 | 24071551 | C | A |
| Osa04LNT0268100.1 | 4 | 24068583 | G | T |
| Osa04LNT0268100.1 | 4 | 24068371 | T | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0268100.1 | osa-miR5541 | Cleavage | 4.0 | 18.313 | 1 | 21 |
| Osa04LNT0268100.1 | osa-miR1861o | Translation | 4.5 | 16.904 | 1 | 22 |
| Osa04LNT0268100.1 | osa-miR166l-5p | Translation | 5.0 | 13.794 | 1 | 21 |
| Osa04LNT0268100.1 | osa-miR1442 | Cleavage | 5.0 | 21.773 | 1 | 20 |
| Osa04LNT0268100.1 | osa-miR1847.1 | Translation | 5.0 | 21.93 | 1 | 21 |
| Osa04LNT0268100.1 | osa-miR1861a | Translation | 4.5 | 16.904 | 1 | 22 |
| Osa04LNT0268100.1 | osa-miR1320-5p | Translation | 4.5 | 15.979 | 1 | 21 |
| Osa04LNT0268100.1 | osa-miR2875 | Cleavage | 4.0 | 14.837 | 1 | 24 |
| Osa04LNT0268100.1 | osa-miR1873 | Translation | 5.0 | 10.622 | 1 | 24 |
| Osa04LNT0268100.1 | osa-miR1320-5p | Cleavage | 4.5 | 7.549 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0268100.1 | 4 | orl1 | Morphological trait | Culm/leaf | S10628 | C377 |
| Osa04LNT0268100.1 | 4 | qChla4-1 | Morphological trait | Shoot/Seedling | C2807 | RM241 |
| Osa04LNT0268100.1 | 4 | qChlab4-1 | Morphological trait | Shoot/Seedling | C2807 | RM241 |
| Osa04LNT0268100.1 | 4 | qPH1-4-1 | Morphological trait | Dwarf | RM241 | C2807 |
| Osa04LNT0268100.1 | 4 | qCCFJ-4 | Physiological trait | Source activity | RM261 | RM3785 |
| Osa04LNT0268100.1 | 4 | nan | Resistance or Tolerance | Other soil stress tolerance | RM5586 | RM3916 |
| Osa04LNT0268100.1 | 4 | nan | Morphological trait | Culm/leaf | RM3337 | RM3785 |
| Osa04LNT0268100.1 | 4 | gpp4 | Morphological trait | Seed | RZ569 | RZ565 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)