© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0269000.1
TGTGAACTTCACAAGTTGATCAATAAATACATTTTTATGAATCTATGACTATGATGCAACAGCCACTTGATGTATAATCCACCCATTTCCTCAAAATTATCAACTACTACAACAGTGCATCAGAATGCATCTATGCAGGCACCAAGAAAGCATATCCATAACGCAAAATTTACATTTAGCAGTAAACCCATGAAGAAATTGAACTCTACTAGAATGCATCTATGCAGGCACCAAGAAAGCATATCCATAATGCAAAATTTACATTTAGCAGTAAACCCATGAAGAAATTGAACTCTACTGATTTTCATAGTTTCCCAAAAGGATGTATATTCCATGCAATGGTGAGCCAGTCAGCTACATATGCTTACTATCCCCCGTCTCAACTGCAAATTGAAATCAGAAAGATTAGAATTCTGCACAGACGCATGGTTTTCTTTTTTTCTTCAAGAAAGCATCTTCACATTCTCCTATTTTGCCCTCGACACCATAATAAATGCACAACTGGATGAAAGGAAATATGAACCACAATACTTGTTTGATCCAATATATATTCAATAACAGCCATACAGAACTTTTAAATTAAAAGGCAACCAATATAGCAACATGTCATATACTACTAGTGTTGAAGGCATTGCAGCTGCAGGTAGATTCTAGGTATGGTAAAAATATGGTACTAGTATGCTAAAACTAATTATATAGTAGCAAATTGGGGAAAAAAATTCTGGGCATTAATTAACTTCCAAAAATCAGTTGGATGGCACAGATTAATGTTTAGCAAGGCATGAAAAACCTTCTGGATCAAATATGAAGCTACCAGAGTGAAGTAAGATGGCAGGCATAGCTGGTGAAGGATCTTAACACAACTCACCTTATAGGCATTTTCTTTGTGATATAAATATAGAGGTTCTATAAACAGGACTGAAGTCCGTGACATGCTGAGATCAAGGACTCAGACGGTACAAACTGGTCAACAAAATGTTGTCAAACATTTAACTGTGAGATAATTACAGTTGATAATATCAGTTCAAATATCATTCAAATAATCATTAAAAATTTGAGAACGAACAAAAAGGCTGATAGTATATCTCCATTACTCTATCACTGAAGAAGAAATTTAAGGAAATAGAAGGGTGAAAATATCAGTTAATTTGATGAATAAAGGAACTATGAAACTTTGAGATTATTTTCAGTCAAATGCCTTTTGTATAACCATCGTTGCCTTATATACAAATGTTGAACTTGATAACCATAGCGAGATTCCTTTGTGGCTTTGCCCATCTGAAGATGAATCAGCTATCCATGGTACATCTTTTCATGCAGGATTGTTCATTCTGTAGTGTTATTCCATGGCCTCCGAGTTATTTTTCTTGAGTCATCATGAATTGCACTTTAGGTCTCTGAGTCACCACATCTCGCAACAATCTTGAGATACAAGAACATGACTCCTTAGGTGGAAGTGTTGTCATTTGCATGATTTATGATGCAGTAAGACAAAACAGCTCTAGCCTCCATGAAAAGATTTGTTACCCTGCCAGTTCACACCCTCATGACATATGCCATAGCACAACTGGAGGGCTTCGTCCCACTTTTTTACTTCAACTAATCCCTTTATGAGGCAAACAAAGACACTTAACTCAGGTACAAAGCCTCTCCTTGTCATTTCACTATACAATCGAAATGCTTCCTCAACTTGAGATGCTAAACAAAGTGCCTGGATCAATGAAGCGTACATGTCATTGTCAGTTTTTACAGATGACGGAACTTCCATCATCTCTTTGTGCAACTCCATAGCTATCTCCAGCCTGCCAGCTTTGGAGAAACAATCGATCAGCATTCCATAAACAGGTGCAATTGGTACTGTGCCATATGATTCCATCTCCTCCAGAATACCCAGAGAAGCGATAAAGCTCTTGCTGAAACCTTGAATTGCACAACGGTATCCTTGTAAGTACTTTGGCCAGTAAGTCTGCTTCATTTCACCAAGCAGTAAACGAGCCTTATCCAAAAGGCCAGCAGCACACAAGTGGTTTATCAGAACTCTGTACGTAACATAATTGGGAGAACATCCTTTTCTGCTCATTTGTGTAAAAAGGTCAAGACTCAGATCAATCTTGCCAGCTTTGCCTAATCCATCTATTAGAGCAGTGTAAGTTACAACATTCGGACTGCATCCTTTCTCTTCCATCAATGACAGAAGCTTTAGTGCCTTCTCACTTTCACCTATCCTACAAAGACCATCAATCATAGCTGTGTACGTAACAACATTAGGAGTACAAGAATCCTTTAACATCTGAGAGAGAACTTTCATTGCAAGATCAAGTCTTCCATCCTTGAACATCCTGTCAATCAACGAGGTGTACGTATGTACACTGGGAAGGTACCCACACTTTGTCATCTGCAGAAATACCTCCTGAGCACTGTCAATTTTTCCAGCTTTGCAAAAGCCATCAATAAGAGCATCGTACACAATGTGATTGGGCTCGCAACCAGAAGATAACATAGCATCTAGTAATTCATGAGCATGGTCCACTTTGTGAGCTTTGCATAAACCATCTACTAGTGCACCATATGTCACAACATTTGGAGCAAGTGTGTGTCTGTCCTCACATGGAAAGTAAAAATCAGAATCGGCGCTATCAGAAGTTCCAATTAATTTGGCATAGACTTCAAAAGCCTTACTGATGTTGCCTGCTTTACAGAGACCATCTACCAATGCACCATAAGTAACATCATTTGGACGACAGCCAGCATCAACCATTCGGTGAAAAATATCATTAGCCTGAGGTACCTGCTTAGCTTTGAGGTAAGCATGAATAAGTGCAGTATATGTCACCACAGTTGGGGAGCAACCCACACTCCTCATCTCCTCAAACAACCACTGGGCTTGTTCAATGAGTCCAGCTTTACAAAAGCTGTCAATCAAAATTGTGTATGTATACACATCAGGAGTTACACCGACCATCTTCATCTCTTGGAACAGAAGGAAAGCTTTCTCTACCTTAGTAGCATGGCAGAGAAAAGTGATCACCTTAGAGTATGTACTTGTATCAGGGACAAAACCTTTCCTCATCATCTCCTTTATGAGCTGAAATGCCTTGTCAAACTTCCCGACACCACAAAGGCATCGAGCAAAATTGGCAACGTTAACCTTATTAAGAACACAATTAGCAGCCAGCATCTCTCCATAAATTTTCTCAGCTAAATCCAGCAAATCAGGGCTTGGTAATTTCTCCTGACCACATATACTTCCAATAAAAATATTGTACACAACATAACCAGGAGGGCAACCACAAGTAGTCATCCTATTTAAAAGTTTATAGGCATACGCATAATCCTTTTCATTGCAATAACTATGCACAAGGGAATTAAACAAGGATGGATTTGGATTGCAGCCCTCAGTCATCATCATATTAATGATCCTCTTGCACCAGCCAAGCTGTTTCTTTTTCAAAAATCCTGAGAGCAACGTCCTATATGTGACCACATTTGGAATACATGAGTTGCATCGCATCCTATGGAGGAATGACATGGCCTCGTCAAAATACGATGCCTCCATCAGCCCGCTGATCATATGTGTGCATAATACTGTATCAAGCTTGAAATCCTCCCTCTCTATCATGTCTAGTGCATCAGCCCACCGCCCCTCTTTGCACAGAGCGTGCGCAAAGCACCCAACGGTGAACCGGTCCATGCAGAACCCCGACTCGGACATCTCCTTCTGAACCCGGAACCCCAAGTCCACCTGCCCCGCGCTCGAGAGCACCTGGACCAGTGCATTGTAGGTCACCTTAGACGGCCTGTACCCAAAGTCCTTCAGCCTCCCGAGCTCCTCCAGCGCCTCGTTCCACATCCCTCCGCGGCAGCACCGCCGCACTAGCACATTGAGCAATCTGCCGAGCACCTCGCGGTCCTCCTCCCCAATCTCCCTAAGCAGCCTCTCGGCATCCCTGGCGCGGCCGTCGAAACCCAACGCATCCGCAAGGGCGTCGTAGCATGCGCCCGTGTGGCTGTACCCAACCTGCCGCTCGGCCCAGAGGAAGAACCTCGCGCAGAGCTCCGGGGCGTCGCGCACCGCCCCGAGCACCGCCACCACGACGGAGTCGGTCAGGAACCCGCGGCACCGCCGCAGGACGCGCTCCGCCTTGCCGTCGAAGTCGGCGCCGAATGCCCGGATCGCCTTGGAGATCAGCACGGCCTCCGGTGGCGGGAGGGCACCGGCCGCGGCGGCGGCGGCGGGCTCCCGAAGAAACTCGAAGTCTCTGGGGCCGAGGCGAGACCGGGGTGGCGGTTGCGGCGGCGCGGGTGGCTCGACGAGGCCGAGCAGGGGGTCCTCGGAGTCGCCGGCGGCGTGGGAGCAGGTGCGGCGCAGGGAGGCGCGTAGTGTCGCTACCGCCGCCGCGCGGCGGCGGATCATGGAGCGGCGGCGTGGGCGGTGGCGGTGGCGGTGGGGCCTGGAGCTCCGTCCATGGAGGTTTTGA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0269000.1 | 4 | 24397956 | T | G |
| Osa04LNT0269000.1 | 4 | 24397639 | C | T |
| Osa04LNT0269000.1 | 4 | 24397350 | C | T |
| Osa04LNT0269000.1 | 4 | 24397697 | T | G |
| Osa04LNT0269000.1 | 4 | 24398266 | A | C |
| Osa04LNT0269000.1 | 4 | 24398942 | T | C |
| Osa04LNT0269000.1 | 4 | 24400607 | A | G |
| Osa04LNT0269000.1 | 4 | 24400640 | C | T |
| Osa04LNT0269000.1 | 4 | 24401893 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0269000.1 | osa-miR5821 | Translation | 4.5 | 18.7 | 1 | 21 |
| Osa04LNT0269000.1 | osa-miR6254 | Translation | 3.5 | 19.554 | 1 | 21 |
| Osa04LNT0269000.1 | osa-miR171c-5p | Cleavage | 5.0 | 8.427 | 1 | 21 |
| Osa04LNT0269000.1 | osa-miR171c-5p | Cleavage | 5.0 | 13.837 | 1 | 21 |
| Osa04LNT0269000.1 | osa-miR1432-5p | Cleavage | 5.0 | 17.039 | 1 | 21 |
| Osa04LNT0269000.1 | osa-miR1847.1 | Cleavage | 3.5 | 14.781 | 1 | 21 |
| Osa04LNT0269000.1 | osa-miR1847.1 | Translation | 5.0 | 13.75 | 1 | 21 |
| Osa04LNT0269000.1 | osa-miR2095-3p | Cleavage | 4.0 | 15.95 | 1 | 20 |
| Osa04LNT0269000.1 | osa-miR2101-3p | Cleavage | 5.0 | 18.633 | 1 | 22 |
| Osa04LNT0269000.1 | osa-miR812o-5p | Cleavage | 5.0 | 10.225 | 1 | 21 |
| Osa04LNT0269000.1 | osa-miR812o-3p | Cleavage | 5.0 | 16.979 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0269000.1 | 4 | orl1 | Morphological trait | Culm/leaf | S10628 | C377 |
| Osa04LNT0269000.1 | 4 | qChla4-1 | Morphological trait | Shoot/Seedling | C2807 | RM241 |
| Osa04LNT0269000.1 | 4 | qChlab4-1 | Morphological trait | Shoot/Seedling | C2807 | RM241 |
| Osa04LNT0269000.1 | 4 | qPH1-4-1 | Morphological trait | Dwarf | RM241 | C2807 |
| Osa04LNT0269000.1 | 4 | qCCFJ-4 | Physiological trait | Source activity | RM261 | RM3785 |
| Osa04LNT0269000.1 | 4 | nan | Resistance or Tolerance | Other soil stress tolerance | RM5586 | RM3916 |
| Osa04LNT0269000.1 | 4 | gpp4 | Morphological trait | Seed | RZ569 | RZ565 |
| Osa04LNT0269000.1 | 4 | nan | Morphological trait | Culm/leaf | RM3337 | RM3785 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)