© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0270200.1
CAATATCTATATATTTATTCAGATTATTTGGATTGGGCATGAATTATTGTCCCATCTGGCCGTTCAGCATGTCCATTTCAATGGCAACCCACAACAGGTTGGAATTTCAGTTGCCATTCACCTATAGAAACCTGATGCCTAACTATACGCTAACTCTCTCCACGGCAGTCAGTCGGAACAAAAAAAATGACCGTCCTGCCATTTTTGTTACACATGGCACTGCCATGCGCTTACCGGCGGAAAAGAGTGGGCTGGTAACTTCAACAGCCACGGAAGCGACTGTTTATCTACCTATTGCCGTGGGGTTTCTTCTTGTTCGTTGCTTTCTCCCGTTTGTGATGCCAGCTTCACAATGTCTTCAACGAGGATCTTTCCATCTTTGTCTTTAGAAAGATTGCTAATAAGCTCTTGGACGCCTTCCTTCCCTATAGTGTCTTTGAGATAATTTGCTGCAGCTGCTACCTCGTCAGGGGTAACTTTGCCATCACGGTCACTATCAAGCAGCTGCCAGCGGTTGCCTATTCGTGCATCAACATCATCAATCTCTTTCTCTAATTTCTGAAGCATTGCATCAACCCTCTCTATTAATGCTGAAGAGACCTTTTCTCCTGCAGCTATCTCTGCAGCATGGTCTGATTCCTCTCTTGCAGCCTTGTATGCTCTCCTAGCTTCTTCTTCACCTTTTGTACCCTCCTTTTCCAGCATGGTGTTATATAGTTCTATCTCTTTATTGACAAGATTCAGAAACTCTTGACGTTCCTTGGCAACAGAAGAAGCAGATGCAAGCACGGCCAATGCTTGGCTGATATCACAAAGCTGCTCCTTCCTGTCATGCTCAACTTTTGCTTTCTTTAGTTCCTTTTCTTCCCTAGCAGTAGGCTCAGTCATTTCTTTCAAAGCCACATCTTCTTCAGTTGCCTTTGGTACCTCAAGTTTTGCCTTGTCTTCTTTCTCTTGCCTTTTCTCCTCTTCCTTGATAAGTTCTTCCTGCATTTCCAGGAATTCCAATTTCCGCTTCCTGTCGGACACAGAATCTTCTGAAGGAAGAACTGTCCCAACAGTATCTACAACTTCATCTGGAAGAGAAGATAATGTTGCTACAACAGCCTCCTCGGGCTTCATTTTCCCAGACATGGTAAAAGCTCTTGATAGTATTAGAAGAGATGATGGCACAGAATGATTAAGTGACAAATCCAACCAGTCTCTGAGCTGATTTTGCATCTCCTCTGTTGACAACAAACCAAGATGGCCACGTTCTCGACATGCTTGTCGAAGCTCCTCCTCAGAAAGAGACTCCACGCCCTCAGCCTGGATCATCTTATCATCATTCTTAATTTCTTGCAATTTCTTCCGAAGCATGAATGTCAGGTAGTGGTCTGTACCAAAAGGTTGGATCCCCATATATTTACACATATTTACCAACCGTGCTCTGTTCATGTTATCCAAAGTCAGTTCATCATTAAACAGCTTTGCAAAGCTCAAAATTTCTTCATTTGAGACATGTCCACCTTTCCTAACCTTGTTCAAAAATTCATCCAGATCTTCAGCTGTCTGTTTCATTTCTCCACTACGTGACGTCTGCACTTCCTTTGCCATTTCTTTTGCAGTATCTTGTAAAAATCTTGCATATTCCATCCTTGCTTTCAATTTCCTTTTCAATGCCTCCTCTTCCTTCATCTTGTCCTGGAAAGTCGATGGCAACATGTTAGGGAACATCTTGAGGAAGACTGGTAGTAAAAATTCCATGAAGGGAACAATGATGAACACAGCAAAAGGTACAAGCCTAAACAAATCAGCTGTTGTGCGTGTAAGCTGTTGCCTCTCTCTTCTTGTTAGGCTCTTTCCACCAGCAAGTTTCACTAACAATCTAGATGAAATCCTAACATCTGCCCACAGCAGCTTAGTTCCCAACCAATAATGCTGCAGTGTAGAAACAAACTCATCCTTCCAATGCTTCAATTTTGCAGCCCAGTCAGCCCTGCTCATTGAAGCAACAGCACGCAGAGCAGGTCCAATACCTAGAAGTATTGCCCAAAATTTATGTATGATTGACTGGTCAGACTTTTGTACTTCCTGCACCAGCTTAGCTTTAGCTTTAGCTTTTGCAGTGCTTAAGCCTTCCACCGCCTGATCACACTCTTCTGGGGATGCCTCCTTTTTCCCCTGATTCTGGTTCTGGTTCTCGCTCCGCTCGTCCAGAATACCAACTTTAGGCTGCCCAGCAGTGCTTGATGTTGGGCGTACTGACTGTAGGAAATACCTGGCTCCCAAGGGGAAACCAAAAGTCTGTGGTTTAGATTCATAAGAAGCAAGTGAAGCACCACGAGTTGGGTGACACAGGATACTAAGGCCCAAAAGTCCTTGTTTCCTTAAGATGTATTGTGCCTTCTCATGGTTTGATTCTCTTGAGTTTTGAGATGCAGTGCTTTGCTCAATTTCACATCCAAACTTTTCTTGCCCAAAAGTAGAAATAGATGAATGTCGTAATAAAACAGGGATATTAGTATGCTCCAGAGCATACTTCCTTCTCCTAATGATCGCCCTCGAGGCCATTTTTGGTTGCTTCTTCCTTTTCTCAAGAGAATGTCAGGGTTATGCCTTTCCGGGTAGAACCCTCGAGAAGGGACGATGGCGCAGCAGCGGTCAACCAGCCGCCAAGCGGAGAAGGGAGACTGGGGGGGAGGGGACGTGCGCGCTCACCGGGGCTCTGGCGGCGGATCGGCCGCACGGTGGAACCCGTCGCGTCGAGCCGCGTCGTGCGTGCGTGGGATCCGGCGGGGCGAGGGGCTCCGCGGGAGGAGTGGGGGAGCAGAGAGCCGCGGGGCGCTCGCGGTTTTGCAGGAAGGAAGGAAGGAGGCGGAGGCAGAGGCAGCGGGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0270200.1 | 4 | 24847143 | A | G |
| Osa04LNT0270200.1 | 4 | 24848292 | T | G |
| Osa04LNT0270200.1 | 4 | 24848560 | C | T |
| Osa04LNT0270200.1 | 4 | 24849191 | T | G |
| Osa04LNT0270200.1 | 4 | 24850797 | T | C |
| Osa04LNT0270200.1 | 4 | 24851188 | A | G |
| Osa04LNT0270200.1 | 4 | 24851445 | C | T |
| Osa04LNT0270200.1 | 4 | 24853181 | T | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0270200.1 | osa-miR167a-5p | Cleavage | 5.0 | 20.405 | 1 | 21 |
| Osa04LNT0270200.1 | osa-miR167a-5p | Translation | 4.0 | 14.72 | 1 | 21 |
| Osa04LNT0270200.1 | osa-miR167b | Cleavage | 5.0 | 20.405 | 1 | 21 |
| Osa04LNT0270200.1 | osa-miR167b | Translation | 4.0 | 14.72 | 1 | 21 |
| Osa04LNT0270200.1 | osa-miR167c-5p | Cleavage | 5.0 | 20.405 | 1 | 21 |
| Osa04LNT0270200.1 | osa-miR167c-5p | Translation | 4.0 | 14.72 | 1 | 21 |
| Osa04LNT0270200.1 | osa-miR164e | Translation | 4.5 | 12.381 | 1 | 21 |
| Osa04LNT0270200.1 | osa-miR167d-5p | Cleavage | 5.0 | 20.405 | 1 | 21 |
| Osa04LNT0270200.1 | osa-miR167d-5p | Translation | 4.0 | 14.72 | 1 | 21 |
| Osa04LNT0270200.1 | osa-miR167e-5p | Cleavage | 5.0 | 20.405 | 1 | 21 |
| Osa04LNT0270200.1 | osa-miR167e-5p | Translation | 4.0 | 14.72 | 1 | 21 |
| Osa04LNT0270200.1 | osa-miR167f | Cleavage | 5.0 | 20.405 | 1 | 21 |
| Osa04LNT0270200.1 | osa-miR167f | Translation | 4.0 | 14.72 | 1 | 21 |
| Osa04LNT0270200.1 | osa-miR167g | Cleavage | 5.0 | 20.405 | 1 | 21 |
| Osa04LNT0270200.1 | osa-miR167g | Translation | 4.0 | 14.72 | 1 | 21 |
| Osa04LNT0270200.1 | osa-miR167h-5p | Cleavage | 5.0 | 20.405 | 1 | 21 |
| Osa04LNT0270200.1 | osa-miR167h-5p | Translation | 4.0 | 14.72 | 1 | 21 |
| Osa04LNT0270200.1 | osa-miR167i-5p | Cleavage | 5.0 | 20.405 | 1 | 21 |
| Osa04LNT0270200.1 | osa-miR167i-5p | Translation | 4.0 | 14.72 | 1 | 21 |
| Osa04LNT0270200.1 | osa-miR167j | Cleavage | 5.0 | 20.405 | 1 | 21 |
| Osa04LNT0270200.1 | osa-miR167j | Translation | 4.0 | 14.72 | 1 | 21 |
| Osa04LNT0270200.1 | osa-miR529b | Cleavage | 3.0 | 22.412 | 1 | 21 |
| Osa04LNT0270200.1 | osa-miR2097-5p | Translation | 5.0 | 9.768 | 1 | 22 |
| Osa04LNT0270200.1 | osa-miR5157a-3p | Cleavage | 3.5 | 12.202 | 1 | 24 |
| Osa04LNT0270200.1 | osa-miR5157b-3p | Cleavage | 3.5 | 12.202 | 1 | 24 |
| Osa04LNT0270200.1 | osa-miR164c | Translation | 4.0 | 12.381 | 1 | 21 |
| Osa04LNT0270200.1 | osa-miR5080 | Translation | 4.5 | 12.707 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0270200.1 | 4 | qChla4-1 | Morphological trait | Shoot/Seedling | C2807 | RM241 |
| Osa04LNT0270200.1 | 4 | qChlab4-1 | Morphological trait | Shoot/Seedling | C2807 | RM241 |
| Osa04LNT0270200.1 | 4 | qPH1-4-1 | Morphological trait | Dwarf | RM241 | C2807 |
| Osa04LNT0270200.1 | 4 | nan | Resistance or Tolerance | Other soil stress tolerance | RM5586 | RM3916 |
| Osa04LNT0270200.1 | 4 | nan | Morphological trait | Culm/leaf | RM3785 | RM1388 |
| Osa04LNT0270200.1 | 4 | nan | Morphological trait | Culm/leaf | RM3785 | RM1388 |
| Osa04LNT0270200.1 | 4 | nan | Morphological trait | Culm/leaf | RM3785 | RM1388 |
| Osa04LNT0270200.1 | 4 | gpp4 | Morphological trait | Seed | RZ569 | RZ565 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)