© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0271100.1
TCAGGACAAACCATCTGACAGTCAAGAGTGATGTATTCTCTTATGGAGTTTTGCTCCTGGAAATTCTTTCTGGTCGTCGTCCTATTGAGGTCAGGAGAGCTTTGTTCTGGTTATTTTCTTGCCCCCCTGACCCCTCTTGCCCCTGCATACGCTCTTGCTTTTCTTTCTCGAGCAGTTATCTGTGGACCTATTCGCCGAAAGTTGATGGCACTGTCTTACATTGCTGACTATCCCTGACAATAAAAGGCTGTTCTCAGTTCTGGATTTAACAAATTCCCCTGTTTAGTTGACACAAAACTTCCCCCAAACTCCTAACTTTCCATCACATCACATCACATCCGAAACTTTCCTACTTATATAAACTCCCAACTTTTTTTCCAAACTACCAACTTTCCCCAAACTTCTCCCCAATTTCAGAAACTAAACACAGCCGCATTGGACGCCAGATTCTTCCTTCATCCAACAAGCTCTTCCATCCATTCATTCCTCTGAATATTTTAGTTTGCTCAAGGAACCATCTGGCTTAAACGTTCAATTGCATAAAGCTTCGCAAGACATCCTAGTGTACAGACAAAGCTCTCAAGTCTAAAATTTCTCCGAGGGATTCACCCTCATATATATAAACCCTGCTAGCGGTTCATGCTCTAGGGAATTTGTACACCGGAATTTGCCTCCTCTCTAATTCTGTATCCTAAACTACCAAATAAACCTTTGTGTCCCAGGCTCATGTTGCCACTGGAAAGGTCTGAACAGAAACATTGCCAGAGTGAAGAAGTCAACAGCGGCATAAAGAAACCCCAAAGCAAGCAATTTAACATTGCTGATCACTGGAGAATGAAGAACCAGTATGACCAATGGAATTGTATAGTATCTAAATTCAACCAATGGGGCAGGGATGAGAGCAAGGGCAACTGATAGAACAAAGGACAGCACCCAAAGTCTTGTCTGTGACTTCCCTAAGATATTAACAATTGAAAACCATGAGTACACATAAACTGGAGTCAAAATGTATTTCATCATCCAGTGAACTTGGATAACCTTCCTCCAAATATAAAAGGTGTAGTGTCTATTGTCAGCAAGAAGATATGGATGAGCAATGCTGAATAAATGTACAGCAACAAGGCTTAAACCAAGAGCCACCAAAATTGCAAAAGAACTATATGTTTTGTTCTTTCTGCACCAGTGGAATAGGTCTGATGCTCGGGTAGGAGTAAAATGCCATGGCAGGAGGGCAGCAGCTGACACTAGACCAAAGTACAAAAACTGTGCAAAGTGTGGTGAAACAACATGAGCTTCCTTAGCACCTAGCACTATGCCACCATTCCAGACTATGAATGCCACAAACACCAAAAGAACCATTGCAAATGGTATAAAAGCAATTAAAACTTCACACTTTGAATTCCATAACTTGAAGATGGCATCCCATATTTCCTCTGTAAAACTGGAATACATAATGTTTGATTCAGAAACAACTTCTCTCTTGTTTATGGGATTATTGTTTCGCCGCCTTCTCAAACCTGGAGCAGTGGTTTTATTATCCATGTGAGATGCCTCTTTGTTTGACTTATCTGTTAGTTCACTGTTCTCGTAACAAACATTGTCCTTGACATAAAGATATTGTGCATGAGCGATGGCTCCATTGGCAGCAAAAAATATCATCCATATTACATTAGTCTGCCGGAGAAGTATAGAAAAAGCACCAAACGCTGCACTGACCCAAAATTGTTTCTTCAAGCAGAAAAGGTACATCGCAAGAACTGCCGCTAATGATGCAACATCAGTATAATAAAGGAAAGTAAAGAACCAATGAATAGGGTACAAAGCTACTAAAATAGCAAATGCAGTTGCCTTCCTCTTGCCAATTTTTGGCCTGATGCACAAAAGCAGGTCATGGACTAGAACACCACAGATCATCGCCATGATAACATTAGTGGATCTCAGAAGTGCTGTAGTGCAAAGGGCATCAAATGCCTCTGCTATTCTAGTCACCCATGCACCAGGAAACAAGGAAGCAACATATGCTAGTGAAATGTAGTACAGGCCAGGAGGGGTGGTGATCATGGGATCCCATATTAAGAAATCTCCACGGCAATAGCGCTGCACCTGGGGAACATGGAAGATCTCATCCATGTAAGGGTCGGGCACGATGGAGGCGACCAGAGCAGCGAGCGGGATCGCCCATGCGGCCACTGCCGCGGCGACGGTCAGCCTCCCCATCCCCCACCCGTACTGGCTCCTCCCCGCTGCGCTGCGAAACCCCGCTCCAGATCCAGCCCCGCGCGCCCCGGGAGCACAGAGCTTACCACCAAACGAACCCTGAGCTCGTCACGACCTCACCGGAGGCGCTCCGGTAGGCCTTGGCGCTGGGGCTCGGGAGCAGTTTCCCGGAGTCGACTGACGAGGTGCGGTGCAGCGGCGGCGCAGTACAACTCCCTC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0271100.1 | 4 | 25144174 | T | A |
| Osa04LNT0271100.1 | 4 | 25145706 | T | C |
| Osa04LNT0271100.1 | 4 | 25145675 | T | C |
| Osa04LNT0271100.1 | 4 | 25145741 | C | T |
| Osa04LNT0271100.1 | 4 | 25146317 | C | G |
| Osa04LNT0271100.1 | 4 | 25148758 | A | G |
| Osa04LNT0271100.1 | 4 | 25148124 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0271100.1 | osa-miR5543 | Cleavage | 4.5 | 16.512 | 1 | 21 |
| Osa04LNT0271100.1 | osa-miR395c | Cleavage | 4.5 | 14.512 | 1 | 21 |
| Osa04LNT0271100.1 | osa-miR395f | Cleavage | 4.5 | 14.59 | 1 | 21 |
| Osa04LNT0271100.1 | osa-miR395o | Cleavage | 4.5 | 14.512 | 1 | 21 |
| Osa04LNT0271100.1 | osa-miR1428a-3p | Translation | 4.5 | 15.329 | 1 | 21 |
| Osa04LNT0271100.1 | osa-miR1850.1 | Cleavage | 1.5 | 3.801 | 1 | 21 |
| Osa04LNT0271100.1 | osa-miR1850.1 | Cleavage | 3.0 | 0.909 | 1 | 21 |
| Osa04LNT0271100.1 | osa-miR1850.1 | Cleavage | 4.5 | 1.806 | 1 | 21 |
| Osa04LNT0271100.1 | osa-miR1850.2 | Translation | 4.0 | 7.311 | 1 | 21 |
| Osa04LNT0271100.1 | osa-miR1850.2 | Cleavage | 5.0 | 10.62 | 1 | 21 |
| Osa04LNT0271100.1 | osa-miR1428b | Cleavage | 3.0 | 15.329 | 1 | 21 |
| Osa04LNT0271100.1 | osa-miR1428c | Cleavage | 3.0 | 15.329 | 1 | 21 |
| Osa04LNT0271100.1 | osa-miR1428d | Cleavage | 3.0 | 15.329 | 1 | 21 |
| Osa04LNT0271100.1 | osa-miR1428e-3p | Cleavage | 3.0 | 15.329 | 1 | 21 |
| Osa04LNT0271100.1 | osa-miR2873b | Cleavage | 5.0 | 20.833 | 1 | 21 |
| Osa04LNT0271100.1 | osa-miR5079a | Cleavage | 5.0 | 17.579 | 1 | 22 |
| Osa04LNT0271100.1 | osa-miR5503 | Cleavage | 2.5 | 19.679 | 1 | 22 |
| Osa04LNT0271100.1 | osa-miR5079b | Cleavage | 5.0 | 17.579 | 1 | 22 |
| Osa04LNT0271100.1 | osa-miR444a-5p | Translation | 4.5 | 20.116 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0271100.1 | 4 | nan | Resistance or Tolerance | Other soil stress tolerance | RM5586 | RM3916 |
| Osa04LNT0271100.1 | 4 | qPH1-4-1 | Morphological trait | Dwarf | RM241 | C2807 |
| Osa04LNT0271100.1 | 4 | qChla4-1 | Morphological trait | Shoot/Seedling | C2807 | RM241 |
| Osa04LNT0271100.1 | 4 | nan | Morphological trait | Culm/leaf | RM3785 | RM1388 |
| Osa04LNT0271100.1 | 4 | nan | Morphological trait | Culm/leaf | RM3785 | RM1388 |
| Osa04LNT0271100.1 | 4 | nan | Morphological trait | Culm/leaf | RM3785 | RM1388 |
| Osa04LNT0271100.1 | 4 | gpp4 | Morphological trait | Seed | RZ569 | RZ565 |
| Osa04LNT0271100.1 | 4 | qChlab4-1 | Morphological trait | Shoot/Seedling | C2807 | RM241 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)