© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0271300.1
GAGCAAAAGGGCATTGCCCTGACTAGAACATATATAAATACATCATAAGTTATCCTTCTTTGAAGAATGATCAGAAGCAGGCGAGGATGAAGAGCTCATCCTGGCCCTATCTCTAGACTCACTTAACATAACTACAACATTCCGCATCGGTGGTCTGTCATATGGAGACATACTAGTACATAGCAATGCAATTTTCAAGACCTCAATCATATGATCGACAGACGTTTTGTCTTCCAAATTCAGATTCTTATCAAGAATCCCTGGACCCAAAGAATTGTCCCTGATGTAATTCTTTACCCATGTTACCAGATCACCTCCCAGTTCTAATGGTTGTACAGGGGCACGTCCGGTTAGCAGCTCCAGCAGTACGACGCCGTAACTGTATATGTCACTTTTTTCAGTAACCTTCATGGTGTATGCATATTCAGGTGCTATATATCCATATGAACCAGCAATTGCAGACATTGATTTTGAGTATGGCATGTCTATCACCTTTGCCAATCCAAAGTCACCAACATGAGCTTCAAAGTTCTCATCAAGTAAAATGTTATTTGATTTTATATCACGGTGGATGATGCGAGGTTTGCAATCGTGATGCAAGTAAGATAGCCCTTCAGCTGATCCTAGGGCTATCATGAAGCGTGTCTCCCAATCAAGTGAAGACGAAGATTGCCCATGAAGTAACTCCCCAAGGCTTCCTCTTGGCATGTATTCATACAACAGAAGGTTGGAACCCTGGTGATAGATGAACCCATATAACTTCACAATATTACGATGCCTTATCTTTCCTAGAGTAAGGATCTCTGCACGAAAACTATTGTCTGTGTTGCTTCCCTCTCTGTTAGAAGCCAGCTTCTTTACAGCAATTGTCTGTCCAGCTTTCAAGATGGCTCTGTACACTGTTCCACATGCACCTCTTCCAATAACACAACTCTCGTCAAAATTATTTGTGGCAGAAACCAATTCCTGAAATGTATATGCATCCTTGGTAGAAACCTGCATGTTAGACCCAGCAGAAAATATTTGCTTGTCTTGCAAAGGAGCTACTGTTTCTAGTGGTTTTCTCATATGATACACAATTATAACGATAAGAATAAGTGAAATTCCTCCAATAACAGCAGCAACAATTGCTATGACCTTGCCCAAAGGGGGGCTGCCTGAATTGGATGACTGGGAAGAAGATATTGACTCAGACCCACATTTGCCAAGTTGTCCGCCACATAGTCCTTTGTTTCCAAGAAAGCTGGTTGACGCCATGTTATCAAAAAGTGGTATAGTGGGGAGAGCGCCGGTGAGATTATTGTAGGAGACATTGAACTCAAGCAAACTAGACAGATTTGCAAAGGTATCTGGGATTTCACCTGTCAGCTTGTTATTATTGAGAAACAAATTTTCCAATAATGCAAGATTACCAAGCTCTGATGGTATGTTGCCAGAGAGATTGTTATAACTCAAATTCATGGCGATCTGCAAACTTGAGAGTAGTCCAAGCTCCTTCGGTATTCCACCAGAGAATTGATTGCCACCAATCTGTAGAGCTGTCAAATGTGAAAGTTTACCAAGAATAGGTGGTATCTCTCCAGAGAGCCTATTGTCAGCAAATGATAGCAGCTCCAGCTGAGGCAGGCTGCCAACTTCATTTGGCAATGAACCTTCGAAGCTATTTTGGCTGAGATCTAGGCGTTGCAACATAGTGCAATTGAAAATTTCTAATGGTATGCTTCCGCCTAGTCTATTGGATGATATATTGAAGACGACGAGCTTTGACAGATTACCTATTTCTTGAGGCAACTCTGATGTGAAATAGTTATTTGTTAGGTCAAGCCTTTGGAGAGACTTGCAATTGCCTATCTGAGGAGGAATAGGACCATTGAACTTGTTTCGACCCAGCTCAATTGTTGTCAAATTCACCAGATTGCAGAGATCAGTTGGGAAGCTTCCTGTCAGACTGTTATCAGCGAGACGAAGCTGCACCAAGGATTTACAACTGGTGATTCCATGGGGGATGTTCCCAATCAGCTTGTTAGCCCCCAAATTCAACAAAATAAGGTTCGACTGCCTGCAAAGATCTCGAGGTATCTGCCCGGTTATATTATTATTTGAGAAATCCACCACCCAAAGCCGGCTATAGATACCAAATCTTGGAGGTATGTCACCTGACAGCATATTGTTGAATAGTTGCAATTGGATTAGTCTGCTCATGTACTGAAAACAGGCTGGAATTGGGCCACTGAGTGTATTGATCGAAAGATCAAGCTTACTCAAATTCCTCAATACACACAACTCGGTAGGAATAGGGCCAGTGAGTTGGTTTTGGAAGAGATAGAGTAAATACAATCGTGGTATCTTGCCAAATTCCTTTGGTACCCCTCCAGTTAAAACATTCTCTGAAAAGTCAATCTCCTCTGCAAGAGAAAGATTGCCAATTTCTAACGGAATCGTACCATTTAATAAATTCCTGTAGAGGTATAGCCTCTGAAGGTTCTGGATGTTCCCGATTGTTGCAGGAATAGGCCCAACCAGATTATTGTCATAAAGGGCAATTGTCCTAAGATTTATGCAGTTTCCAATCTCTGGGGGAATCACACTAGAAAGCTGATTTCCCCACAATATTAAGTCTGTCATATTTGTCAGTTTCCCAATCTCCTTAGGCAATGGCCCTCCTAACTTGTTTTGTGCAAGACCAAACACCACCAGGTTGAGGCATTCACCTATCTCGACAGGAATGTTACCAGATATTGCATTCTGACCTAACCGGACGGTTTTCAGGTTCTTAAGCCTACCAATAGTATGAGGTATAGAGCCAGAGAGATTATTGCTGTACCCTACCAGGTCCTCGAGTGATGCCATATTACCAATCTCATCAGGTATTGCACCAAAGAGCTTGTTGTTGCACAGGTTGAATGTGATCATCATAGCCAGCTTCCCGAGCTCAGCGGGGATTGTGCCCTGGAACTGGTTGTTGTTCAAGTTGAGCCCCGTCAACTTCGAGCAATTCCCAATCTCTGCAGGGATAGTGCCAGAAAACCCATTGAATGACAGATCAAGGTTAGTCAGCTCAGCCAGGCCACCAATGCTCGGGTCGACGGTGCCCGACAGGTTCATGTTGCTGAGGTTGAGGGACACCACCGCCGGCGTAGACCCCGACGAGCAGTTGACGCCCTTCCACCCGCACGGCGATGGATCCTCGGGGTTCCAGTCGTCAAGGTGGTGGAAGGTGTCAACTATCTGCTTCCTCAGCGTCAGGAGAAGCCAGCCTTCATGGTTCAGGCCATGGCAGGTAGTGGCCAGCAGGAAGGCCAGCGCCACGCCGAGCTGCAGAGCCCAGGGCGTGCGAGCCGCCGCCGCAGAGCCCATCTTCCCTTCACAATGGTCGCAGTGGAACCAGAGCCGAACCCCCCCTCCCTACGACCTCGTGCGCTGCCGCATCTCTACGACCGCTCACCGACGCGTGCTCTCTCGCCGCCGCCGCCGCCGCGGATGGGTCGCCGCTGTCCGCTGGCACGCTGGAGCACCGTTGCGACGGCGAGGTCGGGCCGGGCGCGTCCACCGGCGGGAGCTAGTAGTGGTAGTATTAGGAGGAGGAATGGGCGAGGAAGAGAGAAGAAACCTCGTCGTGGCTCGCCGTGGAGGGAGGGGGGAGAAGAGGTGGCGGAGGTGGGAGATGGAGATGGAGATGGAAGGGGGAGGAAATGGAAGCTGGAAATGGCAGGCAAGCACGCTTTCAAGCTCTTGCGAGGCGTAGCGATCGCGGGCGGTCCCTC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0271300.1 | 4 | 25254368 | T | G |
| Osa04LNT0271300.1 | 4 | 25255268 | C | T |
| Osa04LNT0271300.1 | 4 | 25255785 | A | G |
| Osa04LNT0271300.1 | 4 | 25258248 | G | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0271300.1 | osa-miR5788 | Translation | 4.0 | 16.726 | 1 | 21 |
| Osa04LNT0271300.1 | osa-miR2873c | Cleavage | 5.0 | 23.781 | 1 | 21 |
| Osa04LNT0271300.1 | osa-miR399e | Translation | 4.5 | 14.249 | 1 | 21 |
| Osa04LNT0271300.1 | osa-miR399f | Translation | 4.5 | 14.249 | 1 | 21 |
| Osa04LNT0271300.1 | osa-miR399g | Translation | 4.5 | 14.249 | 1 | 21 |
| Osa04LNT0271300.1 | osa-miR399k | Cleavage | 4.5 | 14.249 | 1 | 21 |
| Osa04LNT0271300.1 | osa-miR399k | Cleavage | 5.0 | 17.491 | 1 | 21 |
| Osa04LNT0271300.1 | osa-miR408-5p | Translation | 4.0 | 11.983 | 1 | 21 |
| Osa04LNT0271300.1 | osa-miR444a-5p | Cleavage | 5.0 | 21.774 | 1 | 21 |
| Osa04LNT0271300.1 | osa-miR1432-5p | Cleavage | 5.0 | 19.567 | 1 | 21 |
| Osa04LNT0271300.1 | osa-miR1428e-5p | Cleavage | 4.0 | 16.967 | 1 | 22 |
| Osa04LNT0271300.1 | osa-miR1873 | Translation | 3.0 | 23.048 | 1 | 24 |
| Osa04LNT0271300.1 | osa-miR1428f-5p | Cleavage | 4.0 | 16.967 | 1 | 22 |
| Osa04LNT0271300.1 | osa-miR1428g-5p | Cleavage | 4.0 | 16.967 | 1 | 22 |
| Osa04LNT0271300.1 | osa-miR2866 | Translation | 4.0 | 22.873 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0271300.1 | 4 | qPH1-4-1 | Morphological trait | Dwarf | RM241 | C2807 |
| Osa04LNT0271300.1 | 4 | nan | Resistance or Tolerance | Other soil stress tolerance | RM5586 | RM3916 |
| Osa04LNT0271300.1 | 4 | nan | Morphological trait | Culm/leaf | RM3785 | RM1388 |
| Osa04LNT0271300.1 | 4 | gpp4 | Morphological trait | Seed | RZ569 | RZ565 |
| Osa04LNT0271300.1 | 4 | nan | Morphological trait | Culm/leaf | RM3785 | RM1388 |
| Osa04LNT0271300.1 | 4 | nan | Morphological trait | Culm/leaf | RM3785 | RM1388 |
| Osa04LNT0271300.1 | 4 | qChlab4-1 | Morphological trait | Shoot/Seedling | C2807 | RM241 |
| Osa04LNT0271300.1 | 4 | qChla4-1 | Morphological trait | Shoot/Seedling | C2807 | RM241 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)