© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0271400.1
TTGGGACATTAAGATGCCCTCGTTTCAATTTTATATTCAGACGTTCAGATTGACGAATTTGACATAGAGCTCAAGACACCAGGATGCTGCCAACTGGCGCCGGAATGCATTATATAATACTCTTTGCAGCATATGGTCATATGGAGCAGTGTTCTGCTGCACCTCAAAGTCAAACACACACGGCCACTAAAAGTTAGTATTTCGCTTCCCAAAAAGCTACAATACTACTGACACCATATGCTATTGTTAGACTTCTGACTAACCCAATTTGACCAGTAGGACATCTACAGAGTAAAGAACTGCACGATTTTGGCCAATCTGAGCTGTAGGTATAAGCAGAAGCAAGAGTAAGCAACTACATGGACTTATATACAATCTATGAAGCTGCTGAGGAATTCTTTCAGCACAACAAAATTCAAGGCAAGTGCTCATATGAAAGAAATTGCTTCCTACAGATTTGCTACTGGCATTGAAATGCCATGCTCTGAACAACAAATTGACAGATGCTCCACAGAATCTGTGACAATGTCCTCCAACACTTCACTGGCAATCTGCTCAGTGATCTCATCTGTTTCCATTGTCAATAGCTTAATCCAACCCTTCCCTTCCACCTCCTCCTGCATAATTCTTTCCAAGATTATTCCAGCATTGTCGTCCTTGTTTGCCGCAAAGCTCCCATCTCCATAAAGCCAATCGCTCACGATGTTCCATACTTCTTCACCCAAGGTTTCAGATAGTTTCTCCCTCCATGTTCTTAAGCATGCTCTACTCCATGGATAGCTGCATAGTAACGTATCCTGGCCAATCTCAACCAAGGCCATATTTACACAATCGAAAATGAGCTTTTGGTGTGACCTTCGCTCCCTCGATTTAGCATCCTCCTCCTTGCGATCCAAGAACTTGTCACACAATGCAGGATCAAGGGGGGATTCAGGCAGGTACCACCCTGTGAAGACCATACTTAACTGCAGATGGCATAATCCAGCAGATGATACTATCTCTTGTACAAGAGAGTAACATTTTAGTTCATCATCATCATAATCGGCATCATCTACATTGGAATGCTTTAGGCCACCTAGCAACGGAGAACCTGAGTTGGTATCTTCCCATGAAAATGAGCGGGCAACAGAATCGATAGCAGGGCATCGTAAGGCAACCCTCTCGGTGCAGGAAGTTCTTCTTGAAGATTCAGGTTCATTACTGTTGCTATCTTCAAAAACCGTGTCAAGAATTGAAGTAGGACTAGTCTCATCGTGGATAGATTTTAGATCACCATTTGATTTTACTTCATCAACATCTCCACTTACACAGTCAGAAGATACAGGTACTTCTATGGAACCAGCATCTTTTGTAGAACAGGGAGCATGATTGGTGGAATTATCAGCTTCATCCTTGCAAAAAGCCATTTGTTCATCAGGACCAAGATTGTGATCAGACTGCGGCACCATGTGCCCGATACATCCAAATATCTCGCCTGAGCTATCAGATGAGAGGGAAGTTTTCTCTTTTGTTGGCCTTTTATTGCCTGGGAAGAAAAAACTTGATATTTTCCCCGTGAAAGATAATTTTGCTCTACCTGACTTTGTAAACACCTTCGGAGTCCCTTCAGAATTTGCAGATTGAGCATTCACTGCTACGTTGTCAAATATAGATGAAGACACTGGGACAGATTTTGATTTTGCTAAATTCCTTGGAGAGCTCTTCCCATTTTCATCGTACTCTCTTAAAGTAGATTTGCATGCATCTTTCATGGCCAACTCATTTTCTGTGCCACTTGACCGGTTGCTTGAAACAGAAATTATCCCAGCAACAGCTTCTTCTTTCTTAGCTACTTGAAGGGAGAGCATCTCACCCAAGGTGGTTGAGCTCCTTCGCAAAGGTACTTGTTCTTGATTGATCTCATTGTATGATACCATTGCCCATCTCTCTGAAAGCCGTTTTTTGGCTTCCCTGATCACAGATGACTCAGGTGAATGTGAATGGGCCCTGCTAAAAGTAGAGGCTGAGTGAGGACTGTTGTGTCTTCTGATGTAATCCCATGAATGTCGCGACATTGGACTGACTGCATCTGAGTCACTTGGGCTACCTCCTTCATCAATGTAGTCAACTTCTGACCCACTGAAAGAGCTTTCATCTCCACCATACCCATTTGAATATGTGGATGATATCAGGGATTCGTCCCGCCGATGACGACTCTCTGGCATGTGCTGAACCGAACCATGCAGTAATTCCCTAGATCCTAGGATGGATGCATCATCTTGTAAACCTCCATGGAAGTCGATCCGCCGAGTTTGTTCAGATGGAGCTGCTCGGGCAGTTAGCCTGGCTCCTGTTCTATTAGGCTTCCCAGGGCTAGGCTTTAGGACCACTATCCTAGTTGACTTGGAGAAGTTGTCATCTGCTGAGTAAGATCTCTGGTGAGTCTTTCCCATCACAAGTTCATTTTCTTCATTAATAACTTGGTGTGTTCTGGTTTCTCTTATTCCATTGTTCTCAACAGATTTGATTGGCTTCAACACTGTAATACGCTTCGTCGGAGGCGGTGCAGGCGTTGTGTCAAGTCCATCGAGCTGCTTCAAGAAAGCAGGGCTTGGTTCTTCAAGAAACTTCAGAAACAACTCCCTGTTTGAACTTAGAACCTCAAGAGCTTCTTGAAACTGCTTTGAATGGATGAGATTCTCATTTGTGGCAAGGCGTTTTGCTTCCATGAACTTCTGTCGAACAGCTTCGATCCTAGTGTCACTCTTGTTCCCAGAAGATCTTTCCCAAGGAAAATTTTGCCCCAGAATATGATGTCTCTTTAATGGATCTTCAGAGACTTCGTACACATCCTTAAATTCAACTGTCTCTTTGGGGCCTATGTGTATGTTTGGTGTTGTCCTGCTGTAATGCTGCTCTTGCTGTTGTTGGGGCCTGTTTGTTGCTGCCAAATTATCAAGTGAATGACTTCTCCGCAAATTTCTTCTAGAAGATTGTAATGCTGGTTCTTTAGCAGGTAGATCATCATCAAGCCCCATTAGTCTGGCAACGACACTAGGTGGCTTCCTCTTTGATTCCACTCCTTTGGACATCTCCATTGCTACTAATCTGTTCATTGGAGATATGGTTGATTTGTTGCTTGAAGAATTCCTAGTACTAGCTACTACTAATTTGTCCTCTACACAACCTATTTTGGGATCAACAGTTCTATTGACATCTTGCCGGCTTTTATGAACTCGAGAGCCATCTCTGTGAGTTCTATCAGTTAGCACATTTTTGCTGGTCATCCCGGTACTCAGGTCAAACAAATTGATCACTGCCTTCTTATTACAAAGGAAGCCTCAGAGGATAACAACATTGATGAATCCTATGGCGATGCGGGCGGATGGCGAGCGTTCGCCCGCCGGCGGCGAGCGCGGGGGTGGGCGGGCGCTACGCGACGGCGGCGGTGTGGGGAGGTTGGTTGGTTGGTTTGGTTGGTGTTGGTGGGATGATTTAACCCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0271400.1 | 4 | 25314536 | A | C |
| Osa04LNT0271400.1 | 4 | 25315715 | G | C |
| Osa04LNT0271400.1 | 4 | 25316548 | A | G |
| Osa04LNT0271400.1 | 4 | 25317085 | A | G |
| Osa04LNT0271400.1 | 4 | 25319208 | T | C |
| Osa04LNT0271400.1 | 4 | 25318525 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0271400.1 | osa-miR5534a | Translation | 5.0 | 10.317 | 1 | 21 |
| Osa04LNT0271400.1 | osa-miR5536 | Cleavage | 5.0 | 15.427 | 1 | 22 |
| Osa04LNT0271400.1 | osa-miR5542 | Cleavage | 4.0 | 14.226 | 1 | 21 |
| Osa04LNT0271400.1 | osa-miR5830 | Cleavage | 4.5 | 13.465 | 1 | 24 |
| Osa04LNT0271400.1 | osa-miR6248 | Cleavage | 5.0 | 16.205 | 1 | 21 |
| Osa04LNT0271400.1 | osa-miR395t | Translation | 3.5 | 19.578 | 1 | 21 |
| Osa04LNT0271400.1 | osa-miR395c | Cleavage | 4.0 | 19.635 | 1 | 21 |
| Osa04LNT0271400.1 | osa-miR395c | Translation | 4.0 | 19.578 | 1 | 21 |
| Osa04LNT0271400.1 | osa-miR535-5p | Cleavage | 5.0 | 23.898 | 1 | 21 |
| Osa04LNT0271400.1 | osa-miR395o | Cleavage | 4.0 | 19.635 | 1 | 21 |
| Osa04LNT0271400.1 | osa-miR395o | Translation | 5.0 | 19.578 | 1 | 21 |
| Osa04LNT0271400.1 | osa-miR395w | Translation | 4.0 | 19.578 | 1 | 22 |
| Osa04LNT0271400.1 | osa-miR1865-5p | Translation | 4.5 | 13.123 | 1 | 24 |
| Osa04LNT0271400.1 | osa-miR1869 | Translation | 4.0 | 18.775 | 1 | 24 |
| Osa04LNT0271400.1 | osa-miR1879 | Cleavage | 4.5 | 18.236 | 1 | 24 |
| Osa04LNT0271400.1 | osa-miR1882e-3p | Cleavage | 4.5 | 7.856 | 1 | 24 |
| Osa04LNT0271400.1 | osa-miR2055 | Cleavage | 4.5 | 17.85 | 1 | 21 |
| Osa04LNT0271400.1 | osa-miR2105 | Translation | 2.5 | 14.652 | 1 | 20 |
| Osa04LNT0271400.1 | osa-miR5519 | Cleavage | 4.5 | 18.801 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0271400.1 | 4 | qPH1-4-1 | Morphological trait | Dwarf | RM241 | C2807 |
| Osa04LNT0271400.1 | 4 | nan | Resistance or Tolerance | Other soil stress tolerance | RM5586 | RM3916 |
| Osa04LNT0271400.1 | 4 | nan | Morphological trait | Culm/leaf | RM3785 | RM1388 |
| Osa04LNT0271400.1 | 4 | nan | Morphological trait | Culm/leaf | RM3785 | RM1388 |
| Osa04LNT0271400.1 | 4 | nan | Morphological trait | Culm/leaf | RM3785 | RM1388 |
| Osa04LNT0271400.1 | 4 | qChla4-1 | Morphological trait | Shoot/Seedling | C2807 | RM241 |
| Osa04LNT0271400.1 | 4 | qChlab4-1 | Morphological trait | Shoot/Seedling | C2807 | RM241 |
| Osa04LNT0271400.1 | 4 | pss4.1 | Physiological trait | Source activity | RZ740 | RZ590 |
| Osa04LNT0271400.1 | 4 | gpp4 | Morphological trait | Seed | RZ569 | RZ565 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)