© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0272000.1
CCACATTTTCATCCTCTTTATCCCCAAATCTTATTAGTTCTTCACACCACCAAATGAGCACGTACACCCATCAGAATGTATTCAGTACTCGTTGCCAACCCTCGGTATAACTTAACCCACTGCGGCTCAAAGCCTCAAATCAAATAATTAAGCAAGAAGAATCGGCAGGTACTATGTACCAACAATCAAGCTAACAACTACGAGAGCTAATTAACACGATGAATGCTTCAGAGTGCTTCACCGTGGTCTCCTCGCCGGAGCTTTTGGAAATTGCCAAGATCAGCCGGCGGTGAGCTACCTCGCCGTCACCGGGGGGCTTGCCCGATCACCGGGGCCGTGGCCTTTGCCGGCCCTGAGGCGAAGGGAGATGGTTCTGGGAGTGCTGTAGCATCTCAACCATGGATGGCGTCTGGTAGGAGTAGATGACGGTGCTGCTGTCCGTCGAGTCACCTCGTGCTGTTGCCCTCTGCCACGAGTGTGAGCTCAGCCCGGACAGCATGTAAGCCCTCCCTGAAGACTCGTAGAGCTGGCGATTTGCCATCCTCTCCTGCATCTCTCGCAGCTCCGCGTCGAGGGACAGCGACAGACGGTCACCGCTCCGGCTTGCGAATGACTGTGACAGTGTCCTCCGGCAATCCTCAAGAATGGCCACGGCCTCAGAGAGAGCACCCTTCTCGGCAGCAGCCCTTGCACACTCTATGGATTCAGCAGCTTGTATGCGGTTCCTCTCGCGGTCAACCTCAATGGACACATGCTCAGATATGTTGGATGTTGTCGGCCGGTTGATCTTCACCTCGTCACCTTGAATCTTGATTGTCTCACCTGTCACCGGATCTCTGTAGGCACAAGAAACCTTCAGTGCTGAGGTCTGATGACGAGATTGTGGGATGTTCACGGACAGTAAGATGTCTCTCTCCTCATCAGCATACAGGTGACCAATGTCGACGGAACCGTTTCGTCCATCTCTTGCCACCTTACTTGGGTAGCTACCAGATTTGATGGAAGAAAGTTGAACACCAGGATGAACACATTCCATGCTAACTCGCATCTCTTGGATGACAATGCTAAGAAGCCCACCAATGCATTGAGCAAATGCATCTTGCATTACACCTTCATCCTCGATAAAGGAAAAGGTGCCACCAGAAGCTTGAGCAATTGAGTGCAAGGAATCCGAGTCATGGTCTGCTCCAAATCCGAAGGCATGAAGAGGCACCGTATGGCGAGCATCATTTATAATGGAAGATGGGACAAGTGACTTGTAATCTGGTGAAGCCCCCTGAACACTTGAGGAAATGTTGTATGTATCTTGGCCGTCCGACAGAAGAATGATGCTGCACACTGAATTCTTGTAACTGCGGTCTTCAATCACCTTCATAGCTTTCTTCAGTGCATCAGCAATGTTTGTACCGCCGCTAGCACCAAGTGAGTTAATTGCCTGCAATGCCTGCTGCCTGCCATGATGTGATATTCGCTGAAGGTGGAACAGTCTTCTGGCACTAGATGAGAAAGCAATAACAGAAAGACGATCGCTTGGTCCAAGGTGCTGAACAACAAAACCCATTGCTCGCTTTAGGAGCGCTAGTTTGGTGCCTGCCATGCTGCCACTAACATCAAGCACAGTAACGAGATCAACCGGAGCACGGTTTCTTGAAGATCCAGCTGAGCTTTCATTCGCCAATTTACCTGTGCCCTGGTCTGGGTTAGCACTAGGAGCCTTCAGATGGATCAGAATAGCAAAATCATCTTTAGATGAGGACTGCGGTATGGTTGAGAATTCTGGATATGTGTTTATCTCTGCAGTCTTAGTAGATCGAACATTAAGATTGTCAAAAACTTCTGGCTGCTGCAAAGGTTCATCATCATTGAAGTCTGCTGGCTCAGAAGTATGTGGGCGACGAACTCGCTGATGATGGTTTGGAACTTGGTGGAGAAGAGCCATATTGGCATCTTGTTGGGTCAATCGAGCTCGGCTAACTCCAATTCTTCCATGCGGAATGTTAGAAGATAGCGATCGATTGAAGGGTATCTCTTTCCACTTTGCCCGACAAATTGGGCAGAAATAATTCCCATGTTTCACATTAGATGAGATGCAGTGAAAATGGAACATATGAGAACATTCAGCTGTGAATAGGGCTTGACCATTCCCATGCCGCATGGAGTCAAAGCATATTGCACATTTCCTCTTAGAGGAGGATCGGCTGCTCCCCGACTTGGACCTCCGCACCACGCCGGGGAGCGGCAGCGGCACCGGAACGTCCGACGGCGCCGGCACCGACTCCGGCCCCACCGTCACCGCGGCCTCGCCCCGGCACCGCGCGCCGCTCGCCGCCGCCGGCAGCCGCCTCCGCCGCTCGCTCGAGCAGTCCTCCCTCTCCCCCTCCTCCGCCTCGGGCACGTGCACGCACAGGCCGAGCCCCAGCGCCCTCTTCGCCTTCCTCCACGCGTCCTCCATCGCCACCGCCGCGCGCCCCTTCTCCCCCTCCTCCCTGTGACGACTCTCCCCTTCCTCTTATACCCACCACCAGAAACGCGCGACGTACGCGGCGAAGCCCTACGACCCGCGCGCGAGGATGAGGGGGAGAGGAGGCGGCGCGGCGTTGGACGGGAGCGGTGGCCGTCGCGGCATTGGAGGTGGAGCGTTTGGCTGCGGCTTCTATCTCCTCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGTTTGACCTCGTG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0272000.1 | 4 | 25424970 | A | G |
| Osa04LNT0272000.1 | 4 | 25427041 | C | T |
| Osa04LNT0272000.1 | 4 | 25427582 | G | C |
| Osa04LNT0272000.1 | 4 | 25427767 | C | T |
| Osa04LNT0272000.1 | 4 | 25428632 | T | C |
| Osa04LNT0272000.1 | 4 | 25424787 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0272000.1 | osa-miR5525 | Translation | 5.0 | 17.526 | 1 | 22 |
| Osa04LNT0272000.1 | osa-miR5536 | Translation | 5.0 | 22.132 | 1 | 22 |
| Osa04LNT0272000.1 | osa-miR408-5p | Translation | 5.0 | 22.382 | 1 | 21 |
| Osa04LNT0272000.1 | osa-miR2098-3p | Translation | 4.0 | 21.556 | 1 | 20 |
| Osa04LNT0272000.1 | osa-miR2867-3p | Cleavage | 5.0 | 14.192 | 1 | 20 |
| Osa04LNT0272000.1 | osa-miR1863c | Translation | 3.5 | 18.523 | 1 | 24 |
| Osa04LNT0272000.1 | osa-miR1863b.2 | Translation | 5.0 | 18.368 | 1 | 23 |
| Osa04LNT0272000.1 | osa-miR5149 | Translation | 4.5 | 3.952 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0272000.1 | 4 | qChla4-1 | Morphological trait | Shoot/Seedling | C2807 | RM241 |
| Osa04LNT0272000.1 | 4 | qChlab4-1 | Morphological trait | Shoot/Seedling | C2807 | RM241 |
| Osa04LNT0272000.1 | 4 | pss4.1 | Physiological trait | Source activity | RZ740 | RZ590 |
| Osa04LNT0272000.1 | 4 | qPH1-4-1 | Morphological trait | Dwarf | RM241 | C2807 |
| Osa04LNT0272000.1 | 4 | nan | Resistance or Tolerance | Other soil stress tolerance | RM5586 | RM3916 |
| Osa04LNT0272000.1 | 4 | nan | Morphological trait | Culm/leaf | RM3785 | RM1388 |
| Osa04LNT0272000.1 | 4 | gpp4 | Morphological trait | Seed | RZ569 | RZ565 |
| Osa04LNT0272000.1 | 4 | nan | Morphological trait | Culm/leaf | RM3785 | RM1388 |
| Osa04LNT0272000.1 | 4 | nan | Morphological trait | Culm/leaf | RM3785 | RM1388 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)