© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0272400.1
GGCTGATAAGCAATCAATCGATAATGACCTTTTATGCCAGTTGATGAATAAAACACATGGATATACAAAATATCGTGCCTAAACCCACAAAACAGAGAATTAGCACCGAAGGCAATTAGAACAAGGCTCTACAAGATTGCGCAACCTCCCGCCGATACCACTGTCGTCTAAAGATAGAAACGCAACCACTGTTGCAGGCGACTTCCTTCTGTTTTCTTGAGTCTAAGGGCAGAATATTCATGGAACCGAATTGTCACCTTTATGTGATCCCAGACTTGCAAACTGGACATAGTTTCTTCCTTCTTAGCCATTCGTCTATGCATTCTTTATGGAACATGTGAAAGCATGGCAAGCGGCGGATCGTATCACCAATAGAGGGATTATCAAGGCAAACTGCACACGGCTCTTCAATATTTGACTGGATTACTGACTGAGGCAAATTATTGATCTGGCTTTCTGAAGCACCAGCATGCTGGTGGTTATTTTCATCTAATGCAAGCAGTGCATCATAATCATTTAGATCAATATTAGGTTGAATATGTGCAGCAGGGTATCTGGAAAGAGCTCTCTGGTAAATTATTCTTCTGTTGTTTGAGTCATATCGAACCCTATTAGCATGCTGAGGAACAGTTGAACGCAATACCCTTGGACCTCTTGTAGTGCTTTGGAACCGCCTCGCAGTTCTAGATGTCGGCTGCGCATTATCTTCATGTTGAAGTGACATTGCTATGATCGCATCAATCTCTTCTGTGGGAACAACATGAGGAGTTTCATTGTAAAGCTGCTCCTGAAGTTGGCGAGCCAATAACTCATCAGACTCCAACTGTTCTCTTATGTTGGGATCCACTGAGGTCCGATTGCTGCTACCAATCCCACTCAAACTAGGCCTTACTTCAGGAGAGCATATGTCATCAATATCTACTACAGGAATATGATGACGGTGAGTGGTATGATTTCTAGCAGCTGTTGAGTCTGATGATGCAACTCTAGGTTGATCAACATCAACAGAGCTAGAGCTTTCACCAGGATGGTAAGAACTTGCGATGCGCTTCCTCTTTCTGCTACTGATCCTTATTGTTCTATTAACAAAACTAGCAGTCTGCAATGTTTTTGCTCCACCAATTGAGTTATTGTTGTCTCCTCCCTCAATTGAGTTATTGCTGTCTCCTGATAGTGGCATGGGTATATTACTAGTATTATTGTGCGTTGTTCTCCAACCTTGCTCAGAACCTATACCGGTGTGATCATTGTTTGCAACGGAAGAAGAATCTCCCATGGATCTTGGACAAACCCTCCTCATATAAGCCTCTCCAGACTGCTTAGCACCCACGACATCATGGGAAATTTCTTTTCCTTTATTCTTGTTACCTTCAGAAAAAATACTGTTCACTTGATTTGCAGCCAGTGGAATTACCGTCTCCCCAGCTCTGCCTATTGCCGACTTTCTCCCTGACCTTTTTTCCATGTCAGTTGCAGTGTTTCCCTGCCTTCTTATTATAGGTGAACTATCAGTAAGATCTATCACATTTCCCTTCCCAGAAGCATCAACCTGAGTATCTGGATAGTGTAAGAGTCCACTTGTAGAGCATATTTCTCGCTTTTCATCAACCTTCAGACTTCTTTTGGCTATGTTGGAGGGAGAAATACAACCATTCCGCACCAGCTTTCTTTGGCCCACATGCCTTTGAGGAACAATGCTTGGTGTAGAGCTTGAAATTCCTGTTGTGCCCTTGTCAGTGATCTCTTCCCCTTTGCCCTCTCTAGGACTCGATACTGAACAGACATTAGCACCTACTACTTCCTTCGGCTTCTTAAAGGTGATAGTCCCCATTCTGTTTCGTGGTTTTCCCACCGTAGTAGTAGGAAGACCTGATCCTAAACAGAGAAAGTCAGCATTGCAGCTATTGGCATCCCGTGCACTAATATCCCCTTTTCTGATTTGGCAACTACGGTCCCTTTCTCCAGAGCCCCTGCAATTTATATTGTTTGAAATATTCATGCTCTGATCCAAACCAGATTTTTTTGGCACCTTTTCATTCTCAACAGATGTCTCTATCGTCCGACCTGATTTTAGCAAGGATGATCTTGCTTCAGGATCTTCTGCCACTGGCAGCAATCGTGCCAACTCGGCTTGTTTAAAAATATCGCCAGCATCTAAAGGTGCAGGCGACACACTACTTGCATTGCCTCTACTTGATTGACCCTGGATGGAGTTATTTGTGATCTTAAATTTAATTCTTCGCGATGGTAATGGAGTTCCAGCTGCTTTTGCAATACCTCTCCTAGCAGCTGGGCTAGATACAGGGCATGTTGACTGCTGTATTCGGTCAGGGGTGTCCGGAACCTCAAAGATGTGATCAGGGTTTATGTCAACCATGGTATCCCACCGAAACTATTTCAGTTACAGATAGCTTGCCTCCTCTCCTTTACATGTCAATTTATGATTAAAATTCTCCAACACTTCCTGGGCGGAGCACGATCTGGAGGCGACGGCGGGTCGCGGTCTCGCGGAGGATGGATGGATGGTGGCGGTCGAGATCGCCTCAAGCTCGTTGCATCTCTCTCTCGCTGGTTCGTCTGTTTTTTTTTTCCCGTCTTTTTCTCCTTTTTTCGGTTCGAAATTATCTACGCCCCTGTCCCCCTCGATTTGTTGTCGCCTGCTTCCAATCCAAATTCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0272400.1 | 4 | 25575131 | A | G |
| Osa04LNT0272400.1 | 4 | 25577265 | A | G |
| Osa04LNT0272400.1 | 4 | 25577278 | G | A |
| Osa04LNT0272400.1 | 4 | 25577844 | C | T |
| Osa04LNT0272400.1 | 4 | 25574082 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0272400.1 | osa-miR5543 | Cleavage | 4.5 | 7.292 | 1 | 21 |
| Osa04LNT0272400.1 | osa-miR5807 | Cleavage | 4.5 | 13.478 | 1 | 24 |
| Osa04LNT0272400.1 | osa-miR1437b-5p | Translation | 4.0 | 15.619 | 1 | 21 |
| Osa04LNT0272400.1 | osa-miR810b.2 | Translation | 5.0 | 18.087 | 1 | 21 |
| Osa04LNT0272400.1 | osa-miR1861b | Cleavage | 4.5 | 23.122 | 1 | 22 |
| Osa04LNT0272400.1 | osa-miR1861f | Cleavage | 4.5 | 23.122 | 1 | 22 |
| Osa04LNT0272400.1 | osa-miR1861i | Cleavage | 4.5 | 23.122 | 1 | 22 |
| Osa04LNT0272400.1 | osa-miR1861l | Cleavage | 4.5 | 23.122 | 1 | 22 |
| Osa04LNT0272400.1 | osa-miR1881 | Translation | 5.0 | 19.275 | 1 | 24 |
| Osa04LNT0272400.1 | osa-miR2866 | Translation | 5.0 | 13.31 | 1 | 20 |
| Osa04LNT0272400.1 | osa-miR2868 | Translation | 3.5 | 13.596 | 1 | 20 |
| Osa04LNT0272400.1 | osa-miR2870 | Cleavage | 4.5 | 11.024 | 1 | 21 |
| Osa04LNT0272400.1 | osa-miR5155 | Cleavage | 5.0 | 19.244 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0272400.1 | 4 | pss4.1 | Physiological trait | Source activity | RZ740 | RZ590 |
| Osa04LNT0272400.1 | 4 | qPH1-4-1 | Morphological trait | Dwarf | RM241 | C2807 |
| Osa04LNT0272400.1 | 4 | nan | Resistance or Tolerance | Other soil stress tolerance | RM5586 | RM3916 |
| Osa04LNT0272400.1 | 4 | nan | Morphological trait | Culm/leaf | RM3785 | RM1388 |
| Osa04LNT0272400.1 | 4 | nan | Morphological trait | Culm/leaf | RM3785 | RM1388 |
| Osa04LNT0272400.1 | 4 | nan | Morphological trait | Culm/leaf | RM3785 | RM1388 |
| Osa04LNT0272400.1 | 4 | gpp4 | Morphological trait | Seed | RZ569 | RZ565 |
| Osa04LNT0272400.1 | 4 | qChlab4-1 | Morphological trait | Shoot/Seedling | C2807 | RM241 |
| Osa04LNT0272400.1 | 4 | qChla4-1 | Morphological trait | Shoot/Seedling | C2807 | RM241 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)