© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0272600.1
CCACACCACCATGTCACCATCTGACCGAGTTTCATTGATAACATTTACTCATGACTCCAGCTTCAAAGGCTTATGAGTCATCCAATCAGCATCTACTATATGTTTAACAACATCATTCAAGAATCTTGTACCACAAGTTGCAACGTAGGATCACACTGTAAACTATTATGTATTGACTTTACAAGCAGTATCCAGGTTTAGCACAAGAAGATTTGACCATCAAGCTGACTTCATAATAGCTAGTCTATGCAAATAATCTCAACCTCCTCTGGCTGGCCTATTTGGACCCAAACCGGTTTGCAGGATACAAGCTCAACAGCTTCATCCTGTCCTATGTGGAATATTACACCATTGCCGATTTCCTCTTCAGAAGAGTGGACATTCGTCTGGCCGAAGGTAAGATCAGTACAAGCAACAACATTACATTCAAGGATTTGCCCGGCACACCTTAAAAATGTCCAAGTTTTCTGACTATCTTGAACAGAGGGATTCTGGAATGGCAACACTTCACAACCTGATACCTTTTGTACTAGTTCTTTTCTCAATCTCAAACTGTGAAATGGGGAAATATGCTGGAGTTTTCTCAGCGATACGAGTTTTTTGTGACACCGAAGTTCTAGCATCTCAAGCTGAGAGAATAGAGGGAGTTGCAACAAATGGTTGACACGGCAGAAACCCTCCATTTTAATGCACTGGAGGGATGGGAAACTTGGCAAGTCGAGTAGACACTCACAATTTTTTATTCGCAGATCTACCAATGCCAGAAGCTTGGGCAACCCCGTTAGTTTGCTACAATTCAAAATGGTAAGGTGTCGGAGACAAGGGAAGTCTGTAGCCTCAGTTTCATCCCAATGCTCCCAAGATTCCATGTCTGTGAATTTCAGTGTCTCCAATGTAGGAAAAGCAATCCTGGACTGAAAATCACCAGAGCTAGTATGATCACCGCTAGATAACATCCGTCTCACGTGCTTGATGCTGGTGAGTGAGTTGATGAAAAGATGTTTCAGACAGGGTAATAGACCAAGAGATGGCAATTCTTTACAATTCCGACAATCTTTCAGCTCTAGGAAGGACAATTTAAACGAGCACTGGCTCCCCATCCATACAGGAAATTTGACACCAAAAAAGCCCATGATAATGAGTTCCTCCAGAGCAGGGTGGGGTTGAAGGCTGTCCAACACAGATGATGCGTCATTAGCAAACATGGAGTCATTGTGTGACCACTGGAGTACCAACTTACGCAATTCACCTTTGTTCTTCATGATAGCTTCTGTAGCAATTTGTTCTTTGCTTACGTTCTCTATGCCTGATATGCACAGCTCACCTCTAAGATTGTCCAAGTTAACCAAGTCAGCAATCCCACAACTTCCTGAATCACTTGTGAACTTGATCGTGTGCATTGTTTGGAGATTAGTTAATTCAGAAATTCCACATGGCATGTACACATTCCAGTTATCTATGCGTGGTAGTTCAAGATGCCTTAAGTTAGCAAGGAATTTTATCCCTTGTGGCAGCTCACTAAGATAGTTGCAACACTTGAGGTTCATCGTGTGCAACTTGAATAGAGAACTTATTGACTCTGGCAGGCACTTGATTTTGGTGTTCTCAAGACTGAGGTACCTAAGGTGTATCAGTTCCCCAATAGAGTTTGGCAGGCCCTCCATGTCAGTATTACTCAAATCCAGAGCCCTTAAACATACAAAAGCTTTGAACAGAACACTTGGTTTTTGTATGCTCGAAGTTTTTCTTCCATCGTCATGTTTGGTTCTCTGGACAACCAGCAAAGTTCGCAGGCCAGGGTATTGGGATTCATTCATATATTTGTTATTGGATGCATGAAATTCTCCTATTTCATGAGAATGAGTCTCGCTTGGAGTCAAGGATAGATGGCGAGCTTCTCCATTTACGTTGCTCAATGTAAATCTCTCTATTCTAGAGTACTCATCGGCTGCTACGTACTCAGCAAGCTCATGGTAGAGATCATGCATGACATACCTTTGCTCGTTATGGTCATAAGATGGAGATTGCTGAAGAAAGAACCTCTCCACGAGGTTATGAAAGTACCTGCAAGCAATATCTTCAGCATCGCTTTCTCCATCTGCTGCAGCAAAGCCTTGTGCCAACCATAGCCTGACCAGCTTGTCTTTTCTAAACACATACTCCTTCGGAAACAGCGAGCAATACGAGAAACAATGTTTCAAAGGCTTCTGTAAGCTATTGTAGCTCACTAGAAGAGCAGGAAGGGTATGATCAATCACTTCATTGTTAGCCCACAAGTCACTTTGCTCAACAGTCTCCCAGTGCTTCCTATCAATTGCAATGGATAGAACACTTCCTGCTGCATTTGCAGCCAATGGCAAGCCTTTGCACTTGGCTGCAACAGATTTACCTATAGAAATCAAGCCGTCATCAATAATACTAGGATCACGGTCTTGCAAGGCAGCATTTCGGCACACAGACCAGCAGGTAGTATCAGTGAGGTACCCCAGTTGGTGTATCTTGAATGCCATCATTCGAGCAACTTTAGCACTTCTAGTCGTCACTACAATTCTACTACCAGGTGCAGCAGATTTTAGAGGAACCAGCAAGCTTGTCCAGCGGAGTAGACTCTCATCCCATACATCATCAAGAACAAGCAAGAATCGCTTTCCCTCCAGCCGTTTAGCAATGATTCGATGTAGTTGATTCATCTCAGCGAAGCCGCAAGGGGACTCCGTTGCTTCTTCAGCGAGCTTCCTTGTGAGCTTCAATACATCAAACTCTTGGCACACCCAGACCCACATTTTCATGTCAAACTTGGATCTCAAGGCCTCATCATTGTAGATGTGTTGAACCAGACTAGTCTTCCCAACACCAGCAGCGCCAACTATAGGCACAACAGAGTAGACACCCTGGCAGTTATATTCATCAGATAGGAGCAGCTTAATGACCTGCTTCTTGTCCCGCTCTCTTCCATGAAGGGAGCATTTCGTCAAACAGCTGGTCGGCGTCAGTGGGCTCGGCTCACGTCGCCTCTCCTCATCACTGCTTCGCAGCCGCAGCGCGTCCCGGTCCCTGGCGAGATCGTTGTAGCGCTCCATGATCTTCCCAATCTTGCGGTTGAGGCGATCCGGGGAGGAGGAGAAGAGCGAGCTGAGCTCGCGCTTCCGCTTGCCGGCGCTGGACCGGAGGAGCTGGAGCTTGAACCGCTCGAGGCGGGACGCGCGGAGCGCCTCGAACTCGAGCTCCTCGAGCACGTCCTCGGCCATGCGCTCCAGGTCCTCCAGCTCCCGCAGCCACAGCCTGACGAAGTCATCGGTGACCACGCGCTCCTCGGCGGCCCGGAGCGCCGCGCGGATGCGCCTGAGCCCGTCGATCTCCGCGCCGTCAAGCGCCACCGCCTCGGAGGCGCGGCCGAACGGCTGCAGCAGCGGCGCGGCCAGCCGCTTGGCCCGGAACGCGAAGTCGTCCAGCACGTCGCGCAGCTCGTCCACCATCCTTTCGCCGCCGCAGCGCGCCATGGACAGGGATCGGAACCGGAGCTCCGATTACTCTGGCAATTCTAATCGAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0272600.1 | 4 | 25632159 | G | C |
| Osa04LNT0272600.1 | 4 | 25635715 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0272600.1 | osa-miR5530 | Translation | 5.0 | 13.66 | 1 | 21 |
| Osa04LNT0272600.1 | osa-miR5821 | Cleavage | 4.5 | 24.049 | 1 | 21 |
| Osa04LNT0272600.1 | osa-miR5822 | Translation | 4.5 | 20.769 | 1 | 21 |
| Osa04LNT0272600.1 | osa-miR5827 | Cleavage | 4.0 | 17.481 | 1 | 21 |
| Osa04LNT0272600.1 | osa-miR7695-3p | Translation | 5.0 | 17.054 | 1 | 21 |
| Osa04LNT0272600.1 | osa-miR166a-5p | Cleavage | 4.5 | 14.599 | 1 | 21 |
| Osa04LNT0272600.1 | osa-miR166e-5p | Cleavage | 4.5 | 14.599 | 1 | 21 |
| Osa04LNT0272600.1 | osa-miR169d | Cleavage | 5.0 | 14.633 | 1 | 21 |
| Osa04LNT0272600.1 | osa-miR169p | Cleavage | 5.0 | 14.633 | 1 | 22 |
| Osa04LNT0272600.1 | osa-miR171g | Cleavage | 4.0 | 23.84 | 1 | 21 |
| Osa04LNT0272600.1 | osa-miR171g | Cleavage | 5.0 | 16.816 | 1 | 21 |
| Osa04LNT0272600.1 | osa-miR1850.1 | Cleavage | 5.0 | 17.849 | 1 | 21 |
| Osa04LNT0272600.1 | osa-miR5081 | Cleavage | 4.5 | 19.62 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0272600.1 | 4 | nan | Resistance or Tolerance | Other soil stress tolerance | RM5586 | RM3916 |
| Osa04LNT0272600.1 | 4 | qChla4-1 | Morphological trait | Shoot/Seedling | C2807 | RM241 |
| Osa04LNT0272600.1 | 4 | rfw4a | Resistance or Tolerance | Drought tolerance | RM349 | RM1136 |
| Osa04LNT0272600.1 | 4 | gpp4 | Morphological trait | Seed | RZ569 | RZ565 |
| Osa04LNT0272600.1 | 4 | qChlab4-1 | Morphological trait | Shoot/Seedling | C2807 | RM241 |
| Osa04LNT0272600.1 | 4 | qPH1-4-1 | Morphological trait | Dwarf | RM241 | C2807 |
| Osa04LNT0272600.1 | 4 | pss4.1 | Physiological trait | Source activity | RZ740 | RZ590 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)