© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0273500.1
CATAAGCAATGAAGTTCCCCAGATAAGAAGGGACTGAAATATTATTGAGTTGTGAAACATGGTTGTAAGTCGCTGTGGATATACTACCATGTACTTGCCCAGAATGTCGAAAAAAACAGCTTTGGTCTTCTCTGCACCCTCTTGCTTTGCTTGTATTGCATCTTTCATAAATTTTGGTGATGCGGCAGCATGAAGTAGGAAAGCAAGCATATTTTCTCCAATATGCTGAAGGGATCCTGGTTTCAGATGCTTCATTTTGTCATTCTTCGTGTGATAGACTGATGTCCTATCTGTATAAGCAAAATCAAGACCAGGAAGACCACCAACTTCCTGATATATTTGAAAATCAGTAGCAGATTTTATTGCTCCAGACTGAAAAACGTCCTGTGAAGCTATCTGAGCAGATGGATATTTGGCTACAGAAGCAAAGCTTTCCAGAGCCCAATGATCTGTACCCTGGAAGAGAGTAGATTTCCCGCTGATACCCATAGCTTCCAAATCGATTGCAAAACGTACTGAATTTCTCCAGCGGTGCTGAGTTATAAAACTATGGGCACCATCAAGACCTTCTTCTTCCCCTGTGTTGAATAGAAACAGGACACCACTCTTAAACCCATGAGCCCACTGAGCCACTCCTCGTGCAAGCTCTAACATGACTCCCACACATGAACTACAATCTCCAGCACCTTCGGTCGTGGAAACTGTATCGATATGAGAAGAAACAAGAATCAAATTGTCCTCGGCTTCTGGTAAATACTTGGGAACAACTCTCAGTATCACATGCTTAAGGTTTGAATACAGCATAGTTTTTCCATTGAAAAGGCCACCAGCCATACGATTTGCACCAATATCTGTGTGGAACAGCTCCAGTTGGACATCAACATCCCAATGAGCTGTCTTCTTTATTTTATCTGCTACTGCATATACATACTGAACAGCAAGATCGATGGAATCTGAACCAACTGGATGAGGACCCAAGGCTGCAAGGTACTTAACATGCTCCAGAGCAGATGCCTCTGAGAACCCACGCTTGCCAGCCTGTTCAGCATCAAGGGGCAAAGGAAGATTTGCAAACTGAAAACGATAAACAGACCAGGATCCATGAAGGAAGACCATCAACAATCCCAGCAATAAAAAAGGTGTCCTCCTGCGCCTGCCATAATCTTCATTTGTACTGACTGCTTCATCAACTTTGGGTTTCTCATGGGTTGTGACAGAAGAGCCTCGCCCTCGAGGCATTCTGCATGTATAGATGTGAAGGACAAAACACTTGGGTTTTCGCTGCTCGAGAGGCGGAGACCCAGAGGAAGGGAGGAGGCGGCGACGACGACGACGACGACGACTCCGCTGCTCAAGGCGCGGAGATGGAGGATATGAGGAGGAAGGGGTGGTGCCGCCCGTGCCGCTGGACGACGTGGTGGTGGGTGGGTGCTGGCGGTGGGACGGAGTGAGAGTATGGGGCGCGGCTCTGGTCCCCGGACGAGGCGGCCTGGAGGGAAGACCGGGAGACTGTGGCCTGTGAGAGAGTTTACGAGGGACGGGATGGGGCGCCGCCGAATCCTTGATTGGGATGCCGGGCTGTGGCCCGTGCAAGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0273500.1 | 4 | 26029884 | A | G |
| Osa04LNT0273500.1 | 4 | 26030473 | G | A |
| Osa04LNT0273500.1 | 4 | 26030479 | T | C |
| Osa04LNT0273500.1 | 4 | 26030822 | T | C |
| Osa04LNT0273500.1 | 4 | 26028311 | A | G |
| Transcript ID | Transposon ID | Chromosome | Strand | Start | End | Counts |
|---|---|---|---|---|---|---|
| Osa04LNT0273500.1 | DTM_#DNAt_MULE_japo_Os0229 | Chr4 | - | 26028149 | 26028665 | 516 |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0273500.1 | osa-miR171c-5p | Cleavage | 4.5 | 18.772 | 1 | 21 |
| Osa04LNT0273500.1 | osa-miR172d-5p | Cleavage | 5.0 | 20.285 | 1 | 20 |
| Osa04LNT0273500.1 | osa-miR439a | Translation | 4.5 | 15.589 | 1 | 21 |
| Osa04LNT0273500.1 | osa-miR439b | Translation | 4.5 | 15.589 | 1 | 21 |
| Osa04LNT0273500.1 | osa-miR439c | Translation | 4.5 | 15.589 | 1 | 21 |
| Osa04LNT0273500.1 | osa-miR439d | Translation | 4.5 | 15.589 | 1 | 21 |
| Osa04LNT0273500.1 | osa-miR439e | Translation | 4.5 | 15.589 | 1 | 21 |
| Osa04LNT0273500.1 | osa-miR439f | Translation | 4.5 | 15.589 | 1 | 21 |
| Osa04LNT0273500.1 | osa-miR439g | Translation | 4.5 | 15.589 | 1 | 21 |
| Osa04LNT0273500.1 | osa-miR439h | Translation | 4.5 | 15.589 | 1 | 21 |
| Osa04LNT0273500.1 | osa-miR439i | Translation | 4.5 | 15.589 | 1 | 21 |
| Osa04LNT0273500.1 | osa-miR2092-3p | Cleavage | 5.0 | 21.33 | 1 | 22 |
| Osa04LNT0273500.1 | osa-miR2866 | Translation | 4.5 | 10.841 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0273500.1 | 4 | qChla4-1 | Morphological trait | Shoot/Seedling | C2807 | RM241 |
| Osa04LNT0273500.1 | 4 | qChlab4-1 | Morphological trait | Shoot/Seedling | C2807 | RM241 |
| Osa04LNT0273500.1 | 4 | pss4.1 | Physiological trait | Source activity | RZ740 | RZ590 |
| Osa04LNT0273500.1 | 4 | qPH1-4-1 | Morphological trait | Dwarf | RM241 | C2807 |
| Osa04LNT0273500.1 | 4 | nan | Resistance or Tolerance | Other soil stress tolerance | RM5586 | RM3916 |
| Osa04LNT0273500.1 | 4 | gpp4 | Morphological trait | Seed | RZ569 | RZ565 |
| Osa04LNT0273500.1 | 4 | rfw4a | Resistance or Tolerance | Drought tolerance | RM349 | RM1136 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)