© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0274200.1
GGCTACTTCTGAATGCTGAGTGGCTGTTAACATTCGGAAGTCTTTCGTGTTAGTTGAACATACATTTTAACCTTGCAATTCAGGTGATATAGAACTCCTTTTGTATAAGATCGACCCTACTGATCGTCCAATAAAAAATAGCAAATGAGTTACATCTATCATACAGAAGTGCATGACAAAGGACCTAAAAGCAAAACAAAACAAAATGGGAAAACTGGAAAGCCCCCTTCCGTCAGTAGCATCTTGTAGGTTCAATCAGTTCAGAGAAGAGCGCCCATATCTCCAGCTATTGTAGGATCTCCGAGTGAACTGCTGCGGCGCAAAACTTAACCCAAACATCTCTCTCAGGGCCTTCCCTGGCTCAAGGAGTCCGATCAGTCTGGCAACAAGGGATGCACTCTCCCTGACATGCTCCAGGTCTTTGGTTTCGGTCCAAAGGCAACGAGCAACCTGTAGCCTTCTCCTCTTGGAGGCAAGTGAAACCCCCCATTTGGTGTACATGCTCTCTCGTTCCTCGATTGAGAGCCGTCTTTGCATCTGCCTGCAGAGCATCTCCCTTTCGCGCTGCAACTTCTTCGCACTTGAAACTAGAGAAGTATTCGGGATACTAGCTATCGCTCCATTGGAGTAGGTATCTTTAAGAAATGATAGCCTCCTAAGTTCCACTTCCATGTAAATGGAATCAGCTGGGTCTCCTTTGAATAGCAAGAAAAAATAGGTCCTATGGACCAAAGAAACATTGCATGCATGCCAAAAGTCAATAATCTCTTGTTGCTTCTTCTCGAATTCCAGGGGCCACCGTGAAGGTGACTGTAGGGCATCTGTAATCGGATCCAGTCCTACACTCCTGATGGTTCCTTCTGCCAAGTCTCCATTTCCACTATGACCAAGTTGCTTCTGATACTGAACCTGTGCCATTTCTTTCAGTTCAGCAACAAATTCACCTATGCCAGTAAATTCTGTGTCGCCTGCAACAGAACTGTTAGCCTTCAGTCCATCCCTCGTGGTAGTAATTTCAGAAAGCATTGACCCTGCCCTTGATAGGGTCTCGCTCTCTGCATCATAGTTCAGTGCAGATCCCCTTCTTTGACAATTTTGAGGTCTCCCAGCGAAATCTATGAAACTTCTGTTTGGTGGGGTGCAATCGTCCTTCTCCAAATCTTCAAACAAACTAGATCCAGTAAGAGACCTACAGCTCCTGCTCCTACCAAGTACTTTAGAGCTTGACGAATTACGTGTTGAAGATCCCAGATCTTTTACAATATTGGCAAAAGGTTTTCTGACATTTTCCAAATGCTGCTCAAGGGTAACTGGAGATTCATCACGAAGCCTAGAATTCATAGATGAATTTGAATCATTGTTGATATGCATACTAGAACCTGCATTTGGGTCTTGCAAACTATTGCTCCCCACAGCCGACGATTCCAAACATTCATTTCCTCCTGTTTCATTGGTTTCTATACACCGTACTTCTTTGCAGATATCATCTGAATCTTCATTAGAGATCTGTGAGAGATGATCACTTCTGTTAGTTGGGAGCATCCCACTGAACGGAGGACTGCTGACTGAGTACCTAGATGGGGTAGTAAACTGCACATTATTTTCAGCCTGCTGAGGCTTATGTTCCCTCTGTGCCACTCGCCGGCCTTGAAACCTAAAATTTTGGACACTGTCAACAACTTCTGATGACTCAGTTGTTGATTGCTCATCTTCACACGTCTGTGGAACATCGAAGGTAAAGTTCCTCCCAGAAACCGAGGACTGCTTTGAAACATGGACATGGTTATCTCCAACAACCTGAAGCAAATCCTGAAGCCTGGACTGAGCTAAATCACGCTGTAACTTCAATTCCTTAATTTCTTTCTCCATCTTCCGGATTTGGTTATCCTTTTCCTTCACCAATGATTCAAGACTAGAATAGGAAGCTGGACATCGCAATTCACTCTCCAACCTAGCAAGCTCTTTTTGCAATTGCTTAACTAGTGCTTTATCGGACATGACTACATTAACCTGGGCATTTGTAACTACTTCCTTTGCACAACTTGCAAATAGCAGAGTGTTTCTCGATTGTTCCATATGGCTACGGGCAGGACTCATTGTACAAATAATTGCAGTTCTTGCATTACCACCCAGAGAAGGTTGCAGTATGCGTGTGAGCTTTGAATCTCTGTATGGTATGTGCCCATTTCTTACTTTGCTTAGTTTCCGAATGACAGTTCCTAGGGTAAGTAAACTTCTATTAATATGACAGCCTTCTTTCAGCCTAGCACCAGCTGATAATGCCTGAGATGCACGTTCACTTCCTGCTAAATCAACAAAATTCACACTAGCCACAAGTGTAGTTGATTTATCCTTACCCAAGAACTCACGAGCAGAACTTTCTATTGTCAGTTTAAGTATTTGATGCGATCTGGAGCTGTTTTCATTTAAGTATGTCTCCCCGGTTTTCCTTCACATACAGAAATAAGCTCCTTGAGATGGTTCCAGTCCCTCAATACAACCTCTGTGAGGTTTTCTACATAGGTTCCTTTCTCTGCATCATCCCAAAGTCTAAGAGGAGTGTTTTCTGCACTTAGCAGATCCCTTACAACTTCATTATATATTTCTATTGCTGAAAATTTCAAGACAAATGCTCTCTCCTCATGCTTGCCAATGTAATCATAAATATCTGCTACCGTATATTCAGTTATGCCAGTCATGGTGTATGTCTTTCCACTACTTGTTTGACCATATGCAAAAATACTCGAGTTAATGCCACTAACTACAGAGAGGGCAACCTCCTTGGCCCCTTGCTTGTATACTTCGTTCGTATCGCAGTCAGAGCGGAATACCCTATCGAAGGAGTATGCAGTCGGAGCCGATGGCCTGTCAGGGAAGGTGCTCCGGGAGATTATGGTAGTGTCATTGATGCACTCCCACTCCGACGGATCCCCTCTCGCAATCTCCTTGTCGCTGAGAGGCCTCAGCCTCACTGACACCAGTATCCTCTCCAGCTTCCCCACACCGCCGCCGCCGCCGCCATTGACCACCTCACCTCCGTCCATCTTGTCCCACTGCACCACCTCATCCCCGCCAATCGCCCCCATTTCACCCCTCTACACACACACACACACACACACACACTCCCCCTCTCCCCTGGCCCCTACACCATTCGTTGGGCGGGGAGGGGAGCCACGGGGTGTTGAGTTGTTGCTCCTGCAGGTGGAGGAGAAGGCAAGGCAAGCACCTCTCGTGGACCCCCAATCGTCGTGGAGACGATTAAGATGGTGGTTAGAGCGTCGTCCGCAACAGTAGAATCGCACACTAACTAGGCCTAAATCTAGCAACCGCCCCGCAAGCAGAGCAGCTACTCTACTCATTCCAATGTTGACTATCGCGGCTACTTCCCGAGAACGCCTAAGCATATCCCGCAGGGGGCAGCATCGCGAGCTACTGCCAGATCACAATATCACATCAGTGAGCTAGGCACTAGCAGCCAAGTAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0274200.1 | 4 | 26966776 | T | C |
| Osa04LNT0274200.1 | 4 | 26964147 | T | C |
| Osa04LNT0274200.1 | 4 | 26964252 | T | A |
| Osa04LNT0274200.1 | 4 | 26966163 | G | C |
| Osa04LNT0274200.1 | 4 | 26966723 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0274200.1 | osa-miR5806 | Translation | 5.0 | 20.213 | 1 | 21 |
| Osa04LNT0274200.1 | osa-miR5813 | Cleavage | 5.0 | 16.821 | 1 | 22 |
| Osa04LNT0274200.1 | osa-miR6255 | Cleavage | 4.5 | 23.527 | 1 | 22 |
| Osa04LNT0274200.1 | osa-miR396c-3p | Cleavage | 4.0 | 11.142 | 1 | 21 |
| Osa04LNT0274200.1 | osa-miR397b | Translation | 4.5 | 20.484 | 1 | 21 |
| Osa04LNT0274200.1 | osa-miR159a.2 | Translation | 4.0 | 11.977 | 1 | 21 |
| Osa04LNT0274200.1 | osa-miR408-5p | Translation | 5.0 | 9.957 | 1 | 21 |
| Osa04LNT0274200.1 | osa-miR2104 | Cleavage | 4.5 | 20.354 | 1 | 22 |
| Osa04LNT0274200.1 | osa-miR2880 | Cleavage | 5.0 | 19.401 | 1 | 24 |
| Osa04LNT0274200.1 | osa-miR1863b | Cleavage | 5.0 | 24.024 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0274200.1 | 4 | qChla4-1 | Morphological trait | Shoot/Seedling | C2807 | RM241 |
| Osa04LNT0274200.1 | 4 | qChlab4-1 | Morphological trait | Shoot/Seedling | C2807 | RM241 |
| Osa04LNT0274200.1 | 4 | pss4.1 | Physiological trait | Source activity | RZ740 | RZ590 |
| Osa04LNT0274200.1 | 4 | qPH1-4-1 | Morphological trait | Dwarf | RM241 | C2807 |
| Osa04LNT0274200.1 | 4 | nan | Resistance or Tolerance | Other soil stress tolerance | RM5586 | RM3916 |
| Osa04LNT0274200.1 | 4 | rfw4a | Resistance or Tolerance | Drought tolerance | RM349 | RM1136 |
| Osa04LNT0274200.1 | 4 | gpp4 | Morphological trait | Seed | RZ569 | RZ565 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)