© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0274400.1
GGCAAAGTAAGAATTGGATCAGCTGATCTTGAAAGAGACCTGTTACAATATTCGGTCTTCGGGTCCAACTTATCACCAAATATATACATGTATACACTAAACATTTCTCTACTATACAAAATTTCTTCTATTAGCGCCTACAGGCTAAAACCATAAATCACATTGGTAAGAGATGAGGCAATAAAAATACGCCATTGTTATGAGATGAATTATCTTGAATCTGTTGTCTTACTTCATTGACATGGAAATGGTAACAATGTTTGGTACCTTTCCAATATTTACTGCACAGGTACCTCCAGGAATCCCATATAATACTTCATTATTGCATTGCTGCATCTTTCCTGTAGTAGATGGAACTGCCATGTAATTATAATCCCTGCTACTCCTCTAGTTTGTAGACCTAAATGCCATGCACATTGGTGGGCTGATCTTGGCCAAAGCAAGCAAGGACGCAGGGAAGATCCAAAGACCATCCCCGCATATCAAACCAGATGCAACTGCTGGCACCATTAGTGCTGCTTTGCTTTTGTCAATTATATGCCAGGTGAAGACTATCAGGCTCCCGATACACATGTCGATGGCAAAGCTTGCACCAACCAGGAAAGGAACCCCCATTGCCATCGGTAGGGGAACCCATCTCCCATACTTCGGTGGGCAAAGGTCCCTCGTAAGGTTAGCTGCCACTGCAAAGCCAAAAAACCCATAGCAGAGCTGCAAGCAATGCTGGGGCAGAGCAGAGAAGCCCTCAACACCAAGAATCGCCATGTTTCGGTAGACTAGAGCATATGGTGCTTTCCAGTACCCTTCTGGGTTGCCAATGTCAAAGGCACTGTAGAACAAGAAGAAAGTTAGTGGTGAAATTACACAACCCATGACAGTTCCAATGGCCTGAGCAATAATCATCGATCTCGGTGATGTTAATGTTAGATGTCCCGTCTTGAAATCATGCATCAGATCAGCAGATATGGACACCAGCGATTTCACCAAACCACAGCCTACTAGGCCAGCAACTACACCAGAGTCTTTCCCAGCCCAGGCTGCAAGAATGAAGAGGGCAATCTTTCCATAATTGTAGGCCATATTGATGTCAGTTAGGCCTGCTCCATAGGCATTGCAGAAACCAAGGGCAGGCGCCAATAAGTATGCTATGACAACATAATACCACTTCATCTCATGGAACATCATGGGAATGGCAATTACTGCAATAAAAGTTAATCCAAGATAACCAGAGAAGGCTAGCCAGGAAGGAATATTGTCTGTTGTAAAAACTTCATTACGATGAAGTTCATCGAGCACTGGCATGTCTTCCCCCTTCTTTGCATTCTTCAGTTTTGAGCTATCAAACAGATTCTTAATAGTGAGTGCAACTATCTTCACAAAATTGTATAGGCCATCACCTAGGATGAGAGCTACACAGATGAAGGCCTTGTACCCTTGCAGGCTTTTCATGCTGCTTTCAGGTATATCTGCTGAATACCAATCCCCTTTCAAATCACTGATCAGTGGCCACATTACTCCCCATGAGAGAATGGCGCCGAGTAGGAGAGACAGATTAACAAGGTGGGAGCAAATCATCCCTGCCCCAACATATGTGAGACTGAAATCGAAGAAGAATGTTTGTTGCCAAGCTTTTAGTCCAAAAGTTGGAAACTGCGAGAACCCACAATTGTCTCCACCAGAGTAAAACCACTGGAAGAAGCTCCAAAAGAAACTCATAGCAAAATATTTGGTGAATCCATTTACTTGCTGCTTTGCCATTGCATCCCCATGAGGTGTGTGGAATCCATTTATAAGCACAGCTGTTGCAGTCCCACTTGGGTAAGTTAATTTGTAGTCAATTATCATGACCTTCCTAAGAGGGACGAGAGCGAGAAGTCCGACGAAGCTGACGGCGAGAAGGAATCCAGTCATCCACGCAATGCCGGGCTCCTTGTAGCTCCCCGGCACGTTGCCCTCCGTGTCCTCGCCCGCCATCTCGTAAGTCCTCTTGTTGAGCCCAAGCAAGTAAGAACCAAACCCACCTCCAACTGCGATGCTGTAGCAGGCGACGGCGCAGGTCTGGACGACGGTGTTCTCCTGCCGCGTGAACGGGCGGGCGGCGAAGCCGAGGCGGGCGAGCGCCTGCGTCCAGCCGCGGAGGACGACGAAGGCGATGAGCGCGGCTGAGACGTTGAGCGTGGGGACGAGGCCCGTGGTAAGGTTCAGCTTCATCACGATGACGCTGTACATGGCGCCCACGGCCAGGCTCGCCACCAGCCCGCGCGCCGTCAGCTGCTCCCGCCACGGCGGCGGCGCGCCGCCGCCGCCGCGGGCATGCGTGGCCCCCTCCTCGGCGTCGCCGCCGCCGTCGAGCCCGGCCATCTCCTCCTCCCGCGGGTGCGCTACCACCAGCTCGAGGCGCGGCGGCCCGGGCTGCCGCTTCCTCCGCCTCTCCTGCTTCATGGCGGAAAGAATTTTCCGGCGTCAGATTCACCCCCGTGTCCGAGTTCCAGCGGAGGCATGTGAATGAGAGAATGAAGGGTCGGTGAAACAAAAAGATCTTTTTTTTTTCAGTACGAGGATGAGTTAGCACGAATATGATGCTAGCTAGTGAGCTCCTCACTTGTGTTCTTCTACATCCGTTGTGCTAAGCAACGAAGCTATGAACAAGTGCGCTCTCTCGCCAAGGATCAGTGCAAGAAATCCATAGGGGCAAAGAAAAAGATGAAATTTTTATGGGTGATTCTCCAAAGAAAATCACTGCCTTTTATCTTCAGTGTGGTATCGAGGATTCCAGAAAGATAATGTAAAAAAGACCCACCTGAATTAGCCTGGATTCTCTCTTGCTCTTGCTCCAACTGAAAAGACAAGAACAGCGAGCCAAACGAAACTGAAGGTGAGAAAGAGAACTGAATAGCACGTCACAAAAGAAAGGGGAAGTGATTGGCAAAGAGAAATAGCGTATACTTGGTTTTGTTTCGTCAGAAAAGGAAGCAAGGAGGTTTGGTAATGTTTTTATCTACCAATATAATCACTAGTAGAAGAAATAGAATTTATCTC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0274400.1 | 4 | 27158479 | G | T |
| Osa04LNT0274400.1 | 4 | 27158907 | T | C |
| Osa04LNT0274400.1 | 4 | 27157067 | T | C |
| Osa04LNT0274400.1 | 4 | 27154633 | C | T |
| Osa04LNT0274400.1 | 4 | 27157540 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0274400.1 | osa-miR5817 | Translation | 5.0 | 21.299 | 1 | 24 |
| Osa04LNT0274400.1 | osa-miR7695-5p | Translation | 4.5 | 18.904 | 1 | 24 |
| Osa04LNT0274400.1 | osa-miR156a | Translation | 4.5 | 19.369 | 1 | 20 |
| Osa04LNT0274400.1 | osa-miR156b-5p | Translation | 4.5 | 19.369 | 1 | 20 |
| Osa04LNT0274400.1 | osa-miR156c-5p | Translation | 4.5 | 19.369 | 1 | 20 |
| Osa04LNT0274400.1 | osa-miR156d | Translation | 4.5 | 19.369 | 1 | 20 |
| Osa04LNT0274400.1 | osa-miR156e | Translation | 4.5 | 19.369 | 1 | 20 |
| Osa04LNT0274400.1 | osa-miR156f-5p | Translation | 4.5 | 19.369 | 1 | 20 |
| Osa04LNT0274400.1 | osa-miR156g-5p | Translation | 4.5 | 19.369 | 1 | 20 |
| Osa04LNT0274400.1 | osa-miR156h-5p | Translation | 4.5 | 19.369 | 1 | 20 |
| Osa04LNT0274400.1 | osa-miR156i | Translation | 4.5 | 19.369 | 1 | 20 |
| Osa04LNT0274400.1 | osa-miR156j-5p | Translation | 4.5 | 19.369 | 1 | 20 |
| Osa04LNT0274400.1 | osa-miR418 | Cleavage | 4.5 | 11.671 | 1 | 21 |
| Osa04LNT0274400.1 | osa-miR395w | Translation | 4.5 | 14.388 | 1 | 22 |
| Osa04LNT0274400.1 | osa-miR1430 | Cleavage | 5.0 | 20.013 | 1 | 21 |
| Osa04LNT0274400.1 | osa-miR1441 | Translation | 4.0 | 17.124 | 1 | 21 |
| Osa04LNT0274400.1 | osa-miR2867-3p | Cleavage | 5.0 | 19.673 | 1 | 20 |
| Osa04LNT0274400.1 | osa-miR2868 | Cleavage | 5.0 | 11.607 | 1 | 20 |
| Osa04LNT0274400.1 | osa-miR2876-5p | Cleavage | 3.5 | 17.626 | 1 | 21 |
| Osa04LNT0274400.1 | osa-miR5160 | Cleavage | 3.5 | 16.387 | 1 | 22 |
| Osa04LNT0274400.1 | osa-miR5493 | Cleavage | 5.0 | 20.928 | 1 | 21 |
| Osa04LNT0274400.1 | osa-miR5515 | Cleavage | 4.5 | 17.875 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0274400.1 | 4 | nan | Resistance or Tolerance | Other soil stress tolerance | RM5586 | RM3916 |
| Osa04LNT0274400.1 | 4 | rfw4a | Resistance or Tolerance | Drought tolerance | RM349 | RM1136 |
| Osa04LNT0274400.1 | 4 | qChla4-1 | Morphological trait | Shoot/Seedling | C2807 | RM241 |
| Osa04LNT0274400.1 | 4 | gpp4 | Morphological trait | Seed | RZ569 | RZ565 |
| Osa04LNT0274400.1 | 4 | pss4.1 | Physiological trait | Source activity | RZ740 | RZ590 |
| Osa04LNT0274400.1 | 4 | qChlab4-1 | Morphological trait | Shoot/Seedling | C2807 | RM241 |
| Osa04LNT0274400.1 | 4 | qPH1-4-1 | Morphological trait | Dwarf | RM241 | C2807 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)