© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0275300.1
CGTAATGCTTGTGAATTTTCACTGGTAGAACTGAAAGATTGTTCACTTCATAAAAAAAAAACTACTAGAACTCTGCCTCTGATGATAAATATTAGAAGAAACGGAATAGCATCGACTGGTTCTTTGCAACTATGGGAGCTAAACTATCTAGCTACTATCCAGCTCCACGTCCGGGCACTGTAAAATTGTCGCCCAGGGAATGCTTAAACGCTAGCGTCAGCTAGCTATCCCAACTAAAACTGATTGGCTAAGCTGTCAATCTTCAAATGTTGATTGTTCCTTCCATCTCACCAAGGAACTGAGAAATTCCATCACCTACATGGCAATTGTTAAGTGAAATGACCAAAGCAATTTTGAATTAACTAGGCATAATCAGAAGGGCAGCAAAAAAGTTAAGCATGACAGGAAGGATCACTACTTCTGATGGGCCTCTCAGCATGAAAAAGGCTTCAGACTTCTTGGGCACCTGCGAAACAAGAATCCCACATCCATTCTTTCGCTCGCGAAGCACCTTGAATGCATCTTCATCCGTTTTATCATCCCCAATATAGATAGGAAGAACAGTTTCAGAATCATCTAGCTCAAGCGATCGAAGCAAAAACTCGACGGCTTTTCCCTTGTCCCAGTTGATCATTGGACGAACCTCTAAAACCTTCCGTCCAGTGGATACTTTAAGACTAGGAAAATCTTTTAGAACATTGTTGACAACCTGTGCGACCAACTTCCAGTTCTTCTTGTCGACATTACGATAATGAACAGATACGCAAAACTTGTTGTTCTCAACTGTTGCACCCTTAATCGCTTTAGTGACCTCTATCAGGGATTTGGAAACCTCAGTTATCATAGTCAGAAACTCATTTGCAGGTTGAAAAAGCTTGGTTTCTTTGGTCTTTTCTATGGTACTGTCTGAATCTGCAAAAGATGCTAGTATGTCCATACCATGACTCCCTGCATAGTATATCTCAGTCAGCTTGACAAAATCAAACACCTTGTCGCGGGATCTCCCACTAACTATTGCTGTAGGGAAGTGCTTTGCAACACTTTTCACAGTAGCACGCATCTCAGAGGACATGAATGCTTTCTCTGGATCATTCACAATAGGAGAAAGTGTGCCATCATAGTCTAGAAACAACACAACCTTCTTGTCTTGCGCACTAGCTACGATTTGGTCGAAGAAACATAAGGCAGAAGGACAAATTTCTGCACGAGAATTCTCAGTGGAATCTTCATCAGACGAACCGTCGTAACCAGATTCAATGTCTGGCTTTTCACGGTTCGATGATGTCATCATTACCCCGACAAGTCCATCAACGACTTCAACAAGTTCACGCTTACTGATGTATGTCACACACAATGAAGAACATGGATGCTTCTTGGATGTAACCAAACATGGCATTAGATTTGAAGGCAGTGCCAACACTGGCTGGCTTTTGATCATGGGATTGGTCATGAGTGGCAAACCGTTGCTCATATCCACTACCAAAATGAGGTGGAATAGGCCTTCTTCAACTAGATTTAACCCAGGGTCTTGTCAATGAAAAACCACTTCTTGAGTGTTTTCTTCTTGGTGTAGGTGCGTGCACAGTTGTTCAACAGAAAGTTAGCAGAGATCTTCATGTACTCTCCAGTTCAAGAAGGTATGTGCATCAGAAAAATGACAGCCAGATAGAAAAGGCCATGTAATCCGCCCTACGCATATACCTGTGAAGAATTTGAGATCGATGTGTTGCACCAGGAAGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0275300.1 | 4 | 27727175 | T | C |
| Osa04LNT0275300.1 | 4 | 27728359 | G | C |
| Osa04LNT0275300.1 | 4 | 27728699 | G | T |
| Osa04LNT0275300.1 | 4 | 27726232 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0275300.1 | osa-miR5543 | Cleavage | 4.5 | 15.732 | 1 | 21 |
| Osa04LNT0275300.1 | osa-miR426 | Cleavage | 5.0 | 19.677 | 1 | 21 |
| Osa04LNT0275300.1 | osa-miR426 | Cleavage | 5.0 | 18.962 | 1 | 21 |
| Osa04LNT0275300.1 | osa-miR396e-5p | Cleavage | 4.0 | 16.121 | 1 | 21 |
| Osa04LNT0275300.1 | osa-miR535-3p | Cleavage | 4.0 | 21.471 | 1 | 21 |
| Osa04LNT0275300.1 | osa-miR1430 | Cleavage | 5.0 | 18.964 | 1 | 21 |
| Osa04LNT0275300.1 | osa-miR1856 | Translation | 4.0 | 16.012 | 1 | 21 |
| Osa04LNT0275300.1 | osa-miR1863a | Translation | 4.5 | 22.805 | 1 | 24 |
| Osa04LNT0275300.1 | osa-miR2095-5p | Cleavage | 5.0 | 16.45 | 1 | 22 |
| Osa04LNT0275300.1 | osa-miR2105 | Cleavage | 4.5 | 20.668 | 1 | 20 |
| Osa04LNT0275300.1 | osa-miR2871a-3p | Cleavage | 4.5 | 13.851 | 1 | 21 |
| Osa04LNT0275300.1 | osa-miR2871b | Cleavage | 4.5 | 13.851 | 1 | 21 |
| Osa04LNT0275300.1 | osa-miR396g | Cleavage | 4.0 | 16.121 | 1 | 21 |
| Osa04LNT0275300.1 | osa-miR396h | Cleavage | 4.0 | 16.121 | 1 | 21 |
| Osa04LNT0275300.1 | osa-miR396d | Cleavage | 4.0 | 16.121 | 1 | 21 |
| Osa04LNT0275300.1 | osa-miR5073 | Translation | 4.5 | 16.251 | 1 | 23 |
| Osa04LNT0275300.1 | osa-miR5158 | Cleavage | 5.0 | 18.853 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0275300.1 | 4 | pss4.1 | Physiological trait | Source activity | RZ740 | RZ590 |
| Osa04LNT0275300.1 | 4 | qCTS4-3 | Resistance or Tolerance | Cold tolerance | RM241 | RM317 |
| Osa04LNT0275300.1 | 4 | nan | Resistance or Tolerance | Other soil stress tolerance | RM5586 | RM3916 |
| Osa04LNT0275300.1 | 4 | gpp4 | Morphological trait | Seed | RZ569 | RZ565 |
| Osa04LNT0275300.1 | 4 | rfw4a | Resistance or Tolerance | Drought tolerance | RM349 | RM1136 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)