© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0025200.1
CTGCTATAAATTCTAAAAATTGTGCTTTGGACATAATGTACAAGTCATGACTGACAACAATGAATGGTCACAAAGAAGATTGACAGGTAAGGACGGAAAACAAGCAGAACTGCAAAACTAAGTGTCACCTTACATTAGTTTTCAGCAGATGGATCAGACACATGAGATGTAGCACTCAATCCCTCTGTTTAGCTTTCTATACATGTATGGCATTCAAGGAACTGTGCAGTCATGCATATGCTGAATCATTTCAGTGTATTTTTCCAAAGGAAATCTACCAGTGTAATCTCCATGTACCCAACCTCTCAGCTTTGGGGCTTGTTCCGATCTGGAAAGACAAAATGGTTCTCAACTCGAATGGGGTGTGGACCCGAAAAGCGATATGAATCATACCCAAAAAGTTCAACGGGACAGAAATTCGAGTGAAAACCTGAAAAATTTCACAAGTGATATATAGCAATTTCCTTAAATTTATAGCAAAATCAGACCTTACTTGAACAACACACCTCCAAGCTTTCCTCTCAACCACCTTTTTATCAGTAGCCTTTGGATGGATCCAAAGAGATGACCAGTCAACCGCCAAGAAAAATAGGATTCTTGCTGCAAGAGAGATACTCTATTCTGATCCAGAGCATATAAAACAGCTGAGGCAAAACATATGCATATCATTGCAGAACTAAAGCTTGATAAGATGCTATCCAGCTGCAGTTTTAAAACTTTATGTACAACAGGCAGCTTCGAATCAAGTATCAATGATTGCTAGTATCACACTCAATACCATCAATCTCATCATCTTCGTCGTCTTCTACAACATGCGCAAGGGGATTTGCTTGCATCTTCTTGAAATGGCTTATAAAGTCTGTTGCTTCTGTGATGAGAGCATTCCTTGCAGCCTTCACACCACCTGCCTGTTGAGTCTTGACAGAATCCAGAGCTTTGGACCCTGCAGCTTTTTTACGAGGCCTTGTTGTGCCTTCTCTGCGGGACAATCGGTCAACATATTTCTCATGTAAGATAACATTTTTTATAGGCTTCAGAACTGCTGGGCTCGGTTCAGCGGGGTTTATGCCAACATTCTTTACAGTTTCCAACCTTGCTAACAGTTTTTTCCCTGAACTGTTAGGAGTCCCAGGAGAATCCTCAAAAGAGAATTCCACCGGTAGAACAGTTGGTGATGTCTCGAAAATTGAGAAGTGATCAGCCTCTTGAGTTTGGTCAGTGAGGCACTGCTTCTTCAGTAAATGTCTCACTGTCTTCTGTGCTGCTAGGCTCTTCTGCTTGGCAGTCCGTCTTCTGAAGGAAGGTTCCAGGACGTTTGGATGTTTTGGATCAGACAATGTGAAATGTCCAAGAGGAGAAAATTTCATTTTACTTGTTCTAGGACGAGGAGCAATTGGAGTCGGTGTTGAAAGATCAGCATGAACTCTGCTCAAGCACTCTTCAGCAGATTTTCCAGGAACCATTTTTGAAACTTTCTTCCAGAAATTTGGGGATGGTCGAGCAGTGAAGTAAGCTTTGCGCAATGCCATGTCCTGCTCTTCTGTCCAGTTATTTAAACCACATTGTGTTTCTCGTCTTTCACTCCCATTTAGCTCTTTATTGTTTCTCTCAGCATTCATCAACCTTCCATCACAAAATTTAGGCTGTGGCATTGAAGAAGAGTTATTTTCACCCTTTTTGTGACTGGTGTTTCTAGGCTTATTGGTAGGTGTACTTTCTTGGCATTTTAGGGACAATGATTTGGGATCCTTATGACTCTGCCTCTTTGATGAGGACATTCTTTCTTCTGTTCCTCTCTTCCTCTTTCTTGCCAGCTTCTCACAACAATTGGAATTCAGCTCTTCCTTCTGAGTCTTTTTGCATGATAGATCTGGAACCCTTATCCTGGGAGGAATGCCCTGGGAATCTTGACAAAATATTTTTTGTGAATCCTTGTGGCTTACCATCCTCATAGAAAGCTTTACCACGGTATTTTTCTGGCTCCTTCTTGATGAACTCTCATGATTCTGGTCCATACTAAAAGCATTTTGACTGTTTTGATTATGACGGAGCCGTAGGGATCTTCGGAAAGGCACAATTGCTGACTGCTTTCCCCTTACCATAGATTCCTTGCACACCCCGTCGACCAAAGCCGGGGGATTGCCAGCGAGGCGTGGGGACCGACGGGGAGGAGCAGGCAACAGGGGCTTCTCTGCAGCGTCCTGACTCCGGCTGCCGCATTTACCCGTATCCTTGGCTTTCTTCGGGGCAGCTCGCCTCTTGAACGATTGGGCCTCCTGCTCCCTCTTCTTCTTCTGGTTCTTGGCTGAGGAAGAGGGTAGCAATGAGGGCGAGGTGGGAAGCGCCGGGTGGTGAGAACGTAGCCGCCCCTTCCACGGAGTACCTCTGGCGTCCGGGGTGCAGGATTCGCGTTTCTTGGCCATATGTTTCTTGGATTTATTCCCCCTCAAAGTGTTTATCTGTCAAGAAGCTAGCGCATTGGATTTGGGCAGTGAAAGAAAATAATGCTCATGTTCTTAAAATCTGAAATTTCTCACACATAACGGACAAGTTTTCAGACACGGGCGGATCTAACATGGGACATGGGGGGTTCAAAAAAAAATTTTAGGAACAAACCAAGAAAACTGTTAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0025200.1 | 1 | 22557065 | A | G |
| Osa01LNT0025200.1 | 1 | 22557545 | G | A |
| Osa01LNT0025200.1 | 1 | 22558694 | T | C |
| Osa01LNT0025200.1 | 1 | 22559127 | T | C |
| Osa01LNT0025200.1 | 1 | 22560092 | C | T |
| Osa01LNT0025200.1 | 1 | 22560746 | A | G |
| Osa01LNT0025200.1 | 1 | 22560889 | C | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0025200.1 | osa-miR5790 | Translation | 5.0 | 17.821 | 1 | 24 |
| Osa01LNT0025200.1 | osa-miR5512b | Cleavage | 4.5 | 18.272 | 1 | 21 |
| Osa01LNT0025200.1 | osa-miR160f-5p | Cleavage | 4.5 | 16.86 | 1 | 21 |
| Osa01LNT0025200.1 | osa-miR166l-5p | Cleavage | 5.0 | 18.586 | 1 | 21 |
| Osa01LNT0025200.1 | osa-miR390-5p | Cleavage | 5.0 | 13.585 | 1 | 21 |
| Osa01LNT0025200.1 | osa-miR2863a | Cleavage | 4.5 | 22.236 | 1 | 21 |
| Osa01LNT0025200.1 | osa-miR5150-3p | Cleavage | 5.0 | 18.833 | 1 | 24 |
| Osa01LNT0025200.1 | osa-miR5161 | Cleavage | 3.0 | 13.745 | 1 | 20 |
| Osa01LNT0025200.1 | osa-miR5337a | Translation | 4.5 | 20.203 | 1 | 21 |
| Osa01LNT0025200.1 | osa-miR5500 | Cleavage | 4.5 | 13.478 | 1 | 22 |
| Osa01LNT0025200.1 | osa-miR5503 | Translation | 4.0 | 15.149 | 1 | 22 |
| Osa01LNT0025200.1 | osa-miR5512a | Cleavage | 4.5 | 18.272 | 1 | 21 |
| Osa01LNT0025200.1 | osa-miR5519 | Cleavage | 4.5 | 18.519 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0025200.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0025200.1 | 1 | qVB-1 | Morphological trait | Culm/leaf | RZ776 | RZ744 |
| Osa01LNT0025200.1 | 1 | qVB-1 | Morphological trait | Culm/leaf | RZ776 | RZ744 |
| Osa01LNT0025200.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0025200.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0025200.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RM129 | RM5 |
| Osa01LNT0025200.1 | 1 | nan | Morphological trait | Root | RM23 | RM306 |
| Osa01LNT0025200.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0025200.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0025200.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0025200.1 | 1 | qNVB-1-1 | Morphological trait | Culm/leaf | R2159 | C178 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)