© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0025300.1
CCAATAAAAAAAAAGACCACTGCAACTTAATAAGGGCATTATGAACCTCTAAGTTTAAAACAATTGTTATTTACAGTTTGATTGACAATGATACAAATGTTAATGTTAAAAGCACTAGTCTACAGGTGGTCCCTCTACCATGAACCACAACATAGCGAAACGCAGTGTACAGTTACAACACCATCAAAACTGCAGTAGTGGCACTGTTATGATATGAGGTAATCTTTTGCACGGTGCACCTCTCAAGCAGCTTATGCGGTCAGGTCAGAGATCTGCCTGCCCATTCACGTTCTCTCCGCTTAAGCTTTGCTTGCATCTTGTTGAATTTTTGTTTTCCTTTCTCAAGGAGAGGATCAACCACTACATAGTCATCTGGATCATCTTTCCTCGTCATTCCATCCTTAGAAGAATCAGGTTCAAAAGTCAGCCGGTTGCTGTGCCACCCTGTGTAATCCTCTTCATCAGTCTTCTTTTCTGTGTTACCAGTTGCAGGGTTCTTACTGAGAAACGATGCCTTGAACTTCTGTAGCTTCGCTAACGTCTCATCTTCACGGCCTTGAAGACGGCGCCTTTTCTGTTTTTGCAAATGCTTCTCTTGCTCAGCTGGATTCAATAGCTGCAAATTAGCATCGCCTTTGGACATCCTTTCAGCACTGGCTTCTGAGCCAATGCCTTTTTTCTTCATAGAAAATTTTCTAGACTTGGTTAGCTGGTGGTCTTCATTGTCGTCATCATTGTCATCGTCACTCCTGTGAACTGGTAACTCCTTGTCTTTACGGTGTGCTTTATCTGTTTTTTTGGAGGTTTCACTAGAGCGGATGTCCCCAAGCTCCCTGCGTTTTCTTAGAATTTGAGAGCGCATTCTGTTATCAAAATCCTCCTCGTTTTCATCGTCAGGATAATCATCTGTTTCTGAATCATGCTCTAGCTCTCTGAAGTCAGATTTTTTTGATACTAAAGCCTCCCTGACAGATTGAACAGTCTCCTTTTTTTTGTCCTCTTGCTCCTTGGTCAGTTGCTCATCCGGTGCCTCTCCTTTAAGAAACCGAGGATCATCCAACACATCGTGAATACTTTTTATTTTGTCCTTCACAGAGGATGCTGCCTCATTCTCCTCCTCTTCTACTTCATCTCCAAATGAAAGCACATTAAGTTGCTTAACGGCTTTCTTCTTTGATTTCCCCTCGATATCACCCTTGGCAGTAGGCTCAGTCTTCTTAAGTTGCCTTGGAACAATATCATCAAATGGGTTCCAGAGTACCTCAACTGAAAGAATTTTCTGCGGATACACAGGTCGATCATCCTTATCAGTCTCGATATCAGCCAAGGCTAGAAGGTTGAAAATAGAATCGCCAGTGACCTTCCCAAAGATGGTATTCTTCTTATCGAGCCAATCACAACGGTCAAGGCTGATAAAGAATTGACTCCCATTCGAGTGAGGCGTGCCGGCATTGGCACACGCCACTAAACCCCTGTGGTTAAACCTCAAGCGCGTATGGAACTCATCTGCAAATGGGGCCCCATATATGCTCTCACCCCCGGTGCCGGAGCCGGTGGGGTCGCCGCCCTGGACGAGGAAGGACTTGATGACGCGGTGGAAGAGCGTGCCGTCGTAGTAGCCCTCGAGGCAGAGCTGCACGAAGTTGCGCACCGCCTTGGGGGCCTCCTTCGGCCACAGCTCGATGTCGAGCGGGCCGGCCGTCGTCTGCACTACCACCTTGCCCTTCGTCGGCGGCTCCAGCACGTACACCGACGACATCTCGCCGGCCTCCCGTTCGCCTCCGGCCTCCGCCTCCGCCGCTCTGCCCTAGGGCTCGCTCTCCGGCCGGTCGGGATGGCTCGGGTGCTCGGGTTCGTAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0025300.1 | 1 | 22591495 | T | A |
| Osa01LNT0025300.1 | 1 | 22591696 | C | A |
| Osa01LNT0025300.1 | 1 | 22591875 | T | C |
| Osa01LNT0025300.1 | 1 | 22591924 | C | G |
| Osa01LNT0025300.1 | 1 | 22592076 | G | A |
| Osa01LNT0025300.1 | 1 | 22593155 | C | T |
| Osa01LNT0025300.1 | 1 | 22593421 | G | A |
| Osa01LNT0025300.1 | 1 | 22593558 | C | T |
| Osa01LNT0025300.1 | 1 | 22593704 | C | A |
| Osa01LNT0025300.1 | 1 | 22593942 | A | T |
| Osa01LNT0025300.1 | 1 | 22594675 | G | C |
| Osa01LNT0025300.1 | 1 | 22594728 | T | C |
| Osa01LNT0025300.1 | 1 | 22595120 | C | T |
| Osa01LNT0025300.1 | 1 | 22595624 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0025300.1 | osa-miR5816 | Cleavage | 4.5 | 17.599 | 1 | 24 |
| Osa01LNT0025300.1 | osa-miR171d-5p | Translation | 4.0 | 22.855 | 1 | 21 |
| Osa01LNT0025300.1 | osa-miR171e-5p | Translation | 4.0 | 22.855 | 1 | 21 |
| Osa01LNT0025300.1 | osa-miR171f-5p | Translation | 5.0 | 22.855 | 1 | 21 |
| Osa01LNT0025300.1 | osa-miR437 | Cleavage | 4.5 | 11.761 | 1 | 21 |
| Osa01LNT0025300.1 | osa-miR444b.2 | Cleavage | 4.0 | 17.26 | 1 | 21 |
| Osa01LNT0025300.1 | osa-miR444c.2 | Cleavage | 4.0 | 17.26 | 1 | 21 |
| Osa01LNT0025300.1 | osa-miR444f | Cleavage | 4.0 | 17.26 | 1 | 21 |
| Osa01LNT0025300.1 | osa-miR2096-3p | Translation | 5.0 | 24.23 | 1 | 21 |
| Osa01LNT0025300.1 | osa-miR5513 | Translation | 5.0 | 12.851 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0025300.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0025300.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0025300.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0025300.1 | 1 | qNVB-1-1 | Morphological trait | Culm/leaf | R2159 | C178 |
| Osa01LNT0025300.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0025300.1 | 1 | qVB-1 | Morphological trait | Culm/leaf | RZ776 | RZ744 |
| Osa01LNT0025300.1 | 1 | qVB-1 | Morphological trait | Culm/leaf | RZ776 | RZ744 |
| Osa01LNT0025300.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0025300.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0025300.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RM129 | RM5 |
| Osa01LNT0025300.1 | 1 | nan | Morphological trait | Root | RM23 | RM306 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)