© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0276100.1
TGGAGACAATAGTAACAGACTACGTAACACAGTTCTCCACCCATTGGTGTTTGGTTGGGATGGACCAATGCAACAAGTTTTTACACCACAGTACCATACAGCTACAGAATGTGTGAATCCACAAAAGGCTCAAACATTGTCAACTCATTCGCCGTTCTCTTGTTCTCGTTACATGAAAGCAGAGCGTCATGCTAGAATAAAGCGTCGTCACAAATGCACCGCACGAACCAACTCAAACTACTAATGCGAATAAGCCACCCCGCTGCTACCCTTTTCCGTGTGGAGACGCTATCTAATCTAGTTTTGTAAACTGAGCTTTAACTAATGCACAACCCTTTTTCCTATGAATCTAAGTATAGAATAAAATGGCTTGCACCTCTAGAAATACTGTACACTGCACTGCTACTTCGCACCAGGAGAGATGGATGACCACAGGGATGCTCTGCGAGTTTCAGAATGGCTGATTTCCATGTATCCCTATCTGGTGTACTGATGTTCAATTGGGTGAATTCTCCCGTTGTCAACTTTAATCGGACGAAGCTGAAGGTTGACTCTGTTCGAGAGGTTTCATCACCTTTGAAGGGGGGCCACACAAACTCAGAACAACCGGTAAGAAGATAAGGCCATGCAGAAAGCCTATGATGACAAGTGCTAAGTACATTTGGAAATAGTATACCACAAAAACTTCAGATTTTGCAAAACGTAGGACAATAACTCCAACAAGTTTGGTCAAGGTGATTCCGCTGAATACAGAAGCCCCCATCGTCGATAGAGCTTGCCTTGCACGGCTTTCTCTATTTCCAATGCCTATCATGAAGGCATGTGTGATATGAACACAGAATTCAACAGCAATTCCTATTGACATAACAAGGTTTACAATAGAAATTGCATTGAGCTGAATGCCAAGGATAGCCATCATTCCCATCAAATCCAGTACTATCATGGCCAGCACTATTAAAATGATTATTGAAGCCCACAAACTGCTTGTGACTACGAAGCAAACGACAAACACTGTACCAAGGCAAACACATATGTTCATGATAGCCGTCTTCCATACTCCCAGGTATTGCTCAAAGAATATGTAAAATACTGAATATGGGAACATTTGCATCTGTAATTCTTTGGACATTTTAGAGCTGAAGTCCCGTGCAGCTTTCATAGAATTAACATAATCACTCTGTTTATTGAGAGGAGTATGGTATGTTCGAAATGCTGACGCTTGTATAATGCCATTTTCATAACCGTTAAGGTCCAAACTTGTAGAATAAGCTCCTTTGCCACCCTTAGAACAATCACTTGACGGAAGTGCGTCAAGAAACCATGGAAGTTTCTCTTTGAATTGAGTTGTGGATGGGCGTCCATTATGCAAGTCTGATCGTAAGAAGCACGTTGTACAATTATTGCATGCTCCACTTGCACTACATGAGCTTGAGTCTTGATCATGTTGACAGCATGGAGGCTGGTCATCTGGTGGGCAATAACTTCCATTAACAAATTTCCGACAGCATCCAAACGCTTCAGGAGACATCCATATTAGGAAATCATCAAGCCATGAGGCAGCAGGTTTAGCAATGTAACTTGTCTCGGGAGATAATGATTGTTTTGCTATCTCGTTTAAAAGAGAATTTGAATCACACTGGTTGATTGAACATATCTTATTTGTATGTTCTGATGCTGAGCTATAATTGAAGTTCTTTATGACAAAATATAGTGGTGGGCCAACTTTCATGTATGTTGCAAGATCATCAAAATAATCCTGTAAGTAGGAATCTCGTGGTAGAACAATTTTCTGCTCCAATCCTGGTTGCAGTCTAGTGGACAATGCTATGCTTGCAAATGAAAATCCTACAAACACAGCAATCACAACAAACTTCACTGCCCGATAACCGAGAATTGGTGCATGGACATTCTTCATGTATCGTGCAAGCAAAGGAAGCCCCTGGTGGTTACCACCATCAGAAGCAACAACACTCGATTTTACTCTCGCACAAGGCATACAATCAATCCTTCCATCTTGAGCCCTCCTGAAATCAAGTACAATAAGGGCCACAAAAGCTGAAACTTGGAGAAGGAAATCCAGAAGCACCGCCAATGCAGCGAACATGGAAAATACTCTGGTCGCAGGCATTGGATTGATTGCACTCACAGCAAAAGCTAAAACTTCAGCCAAACTGGCCAATGTAATGGATGGTCCAACTTCCACCAATGCAGTACTTATCCGTTCTTCCAAATCCAAGCCATCTGGTTGGCGTTTGACAGCGTGCACAAGGATACACATGTTGTCCACACCGACAGCCAATACTAGAAACGGGATTACTTCCATTATGATTAGAGTTGATTTCACTCCGATTGCACTGAAGAATCCCATTGATCCTAGAACTGAAAGCATCACCAGGACAACCCCAGACAAGCCAAGAAGGACCTTTGATGAAACAAATAGTGACAGCAAATGAGAAGGACGGTCTCCGAGAGTGAATGATATGTAGGCAAACATCACAATATAGCTAATCACTATTGTAATTGCATCAGCTGTACTCTCTCTGTTTAATTCATCTTGGATAGAACTCTCGGATGAGAAGGACATTGTAAGATTGTGTGCTAATACCATTGGCAATATTTCTTCCTTGACAAGATTAACATATGCCCTTTCCCAAGCCACAGCTTTTCCATTCTCCTGTCCTGTTGTCTCAACCTTGTTGTTCACAGGATATGTTATTACAAATGCAGAAGCCTCAGTAAAATTGTTTCCTGGAAAACCACCTAATATGGTACTAGGATCAATAGGTGACTGAAAAGTACTCAAACATGTCTCTTCAGTAGTGTAATGCTGAAAACAAAACTTAGCATGGTCTATACCCGAATCATCATACTTTTTAGGATCCAGTTGGAAATACTGTAGAACACTTTGTGTAGCACATTCTGTACCAAGCGGCTTTAAGCAGATGTCAGCAAGAGATACTGTTGACCCAGAATAATTTGCACGCAGATCATCAATCTTTTTCTGAATCTGAAATAGTAATTTCATATTGTTGTCATTGACTATTGTAGGAGCTTCAGAACCACCAAATGCAGAAGTGGCTAATACAAGCTGCTCAATCCTATAGAATGGTGCAAGATGACTATCAAAATATTGCTTCTCATCAGCAGCCCGACTTCCAGAACTAACCCAAAGCTTCTCTGGTCGTATTTCAACCTTGAAACGAATTAGACCAATGCATAATAGGGTAGGGACAAGCAAGGATACAAATAACACAAGAAGAGGATGTTTAGCAACAAATGTCCCATGCTTCCTAAAGAAAGTTGACATGTAAGTTTGAATAACAGAAGGATGGGCTGATTGGACAGGAGCGGATGCAGCTTCAGACACCTGAGCAGAGCTATCAGGAACCTTGCCATTGTTGCTTGAGTGGATCTTATCTTCTGCATTTTTCAATGGTTTTGTGTGTGAGAAGATGCCAGATCTTCGTGTTCTGTGTAAGAATGCCCCAAATAAAAATATACACAATAACACAAGGTATACAACCACCAGTGAGAAGTCCAAGCATTTGGCCTTCAGAGAACCCATTTTAACTGAACAGGAGGTTTCTGTGTTCAACTGAGGCAACAAGGATCCCGTGCAAACAGAAGAAGAAGGACAATCACCACATGAACAGCCCAAAGATGGATCTCCACAAGAATAAATTGTAGCATTCAGCGGCTTCACCGCAGTCGAACCACTAATATCGGATGGAAATGTTATCAAATAAGGTGAACCAATCTGATTAAGGTCGGCCTGTCGCCCAATAAATGCCATCCACTCTTTGTAATTTTTAGCGCCTCCACCTAGGAAATCCATTGCACGTGTGTTCAGTGTGCCAAATTTAACATCCTTGCAGGAGTTGTATAGCTCTTCACCATAGGTACTTGTTACATAGTAATCTATGCCATTAACAGTCATAGTATTATTAACCTGTTTTACTGAAGTCACGTTAATGAAGAGGCTTTGGTTTGGGGAACAAGACATTTCACAAAAGAGATTCAAGAAATTCCTCAGGCATGCTGGGCATCCAACAAGAAATGGAATAGCCTGTTGCACCTGTTGATGTAATGTGTCAAACTGATCTACCGTACAACAGACATCGCCAGTGATAGTTGGGCACAAACTCTGAATCCTCGCAGAAAACAAAGTGTCTGGCTTAACAGCTTTGGTTGCATTCACGCAGTTCAAGACCTTCCCATCACTTCGCTGTGCACAAATACCGTACATGGAACAGTATCCTTCTGCAGGTACAACCCTTGAAGTACCATTAGATTGCTGGGCTCTTGTAGGAGGCACGAGAAAAACAAGCTGCATCAGAGCCACCGCCACGGCGGCGAGGGCCGGGCCGCCGCCGCCGGCGACGCCTCGCCGGCGCCGGACGAGCGCCATCCCCTCTCTCGATCTCGAACTCGAACTCGAACTCTCTCTCCCAATCTCGTCGAGCGTGGGCGCGGAATGCCGCAGTGGGAGGAGGTGGAAGACTAGGCGAATGGGGTCCACAGGCGCTCTGGCGCCGGGATGGAAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0276100.1 | 4 | 28230606 | C | T |
| Osa04LNT0276100.1 | 4 | 28231732 | G | C |
| Osa04LNT0276100.1 | 4 | 28232876 | T | G |
| Osa04LNT0276100.1 | 4 | 28234329 | A | G |
| Osa04LNT0276100.1 | 4 | 28234567 | A | G |
| Osa04LNT0276100.1 | 4 | 28235872 | A | T |
| Osa04LNT0276100.1 | 4 | 28236895 | A | G |
| Osa04LNT0276100.1 | 4 | 28237034 | G | A |
| Osa04LNT0276100.1 | 4 | 28237906 | T | A |
| Osa04LNT0276100.1 | 4 | 28238249 | C | T |
| Osa04LNT0276100.1 | 4 | 28229318 | G | A |
| Osa04LNT0276100.1 | 4 | 28240781 | T | C |
| Osa04LNT0276100.1 | 4 | 28226297 | A | T |
| Osa04LNT0276100.1 | 4 | 28228430 | A | C |
| Osa04LNT0276100.1 | 4 | 28227510 | G | A |
| Osa04LNT0276100.1 | 4 | 28239026 | T | C |
| Osa04LNT0276100.1 | 4 | 28228137 | C | T |
| Osa04LNT0276100.1 | 4 | 28238824 | T | G |
| Osa04LNT0276100.1 | 4 | 28239241 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0276100.1 | osa-miR818f | Translation | 4.5 | 13.947 | 1 | 21 |
| Osa04LNT0276100.1 | osa-miR7694-5p | Cleavage | 4.5 | 18.795 | 1 | 24 |
| Osa04LNT0276100.1 | osa-miR393b-3p | Cleavage | 4.5 | 18.187 | 1 | 21 |
| Osa04LNT0276100.1 | osa-miR393b-3p | Cleavage | 5.0 | 12.659 | 1 | 21 |
| Osa04LNT0276100.1 | osa-miR172d-5p | Cleavage | 4.5 | 20.672 | 1 | 20 |
| Osa04LNT0276100.1 | osa-miR416 | Translation | 4.5 | 12.013 | 1 | 21 |
| Osa04LNT0276100.1 | osa-miR435 | Translation | 4.5 | 11.362 | 1 | 20 |
| Osa04LNT0276100.1 | osa-miR435 | Cleavage | 5.0 | 17.34 | 1 | 20 |
| Osa04LNT0276100.1 | osa-miR535-5p | Translation | 3.5 | 17.935 | 1 | 21 |
| Osa04LNT0276100.1 | osa-miR529b | Cleavage | 3.0 | 16.702 | 1 | 21 |
| Osa04LNT0276100.1 | osa-miR1428a-5p | Cleavage | 4.0 | 22.2 | 1 | 21 |
| Osa04LNT0276100.1 | osa-miR1428a-5p | Cleavage | 3.5 | 8.437 | 1 | 21 |
| Osa04LNT0276100.1 | osa-miR1435 | Cleavage | 5.0 | 18.905 | 1 | 20 |
| Osa04LNT0276100.1 | osa-miR5076 | Translation | 5.0 | 15.243 | 1 | 22 |
| Osa04LNT0276100.1 | osa-miR5144-5p | Translation | 5.0 | 16.908 | 1 | 21 |
| Osa04LNT0276100.1 | osa-miR1862f | Cleavage | 4.0 | 19.481 | 1 | 20 |
| Osa04LNT0276100.1 | osa-miR1862g | Cleavage | 4.0 | 19.481 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0276100.1 | 4 | pss4.1 | Physiological trait | Source activity | RZ740 | RZ590 |
| Osa04LNT0276100.1 | 4 | qCTS4-3 | Resistance or Tolerance | Cold tolerance | RM241 | RM317 |
| Osa04LNT0276100.1 | 4 | nan | Resistance or Tolerance | Other soil stress tolerance | RM5586 | RM3916 |
| Osa04LNT0276100.1 | 4 | nan | Morphological trait | Root | RM3288 | RM5503 |
| Osa04LNT0276100.1 | 4 | rfw4a | Resistance or Tolerance | Drought tolerance | RM349 | RM1136 |
| Osa04LNT0276100.1 | 4 | gpp4 | Morphological trait | Seed | RZ569 | RZ565 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)