© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0276200.1
GAAAGAAATTCACCAGTAAATTCTTGCTGTGATTCTCAATCATTATTTACAACAGAATTATTTCATGCGGTAGAAGAACTGCACTGAATGAACAGGAACACTCAAAACTGAGAGGGGAAGGTACATGTATGTGCCATTTCTACGATGTGGCCTTCTCGTTCTTTGTGTTTCGCAGCAGTTCTTTTGCCATTGCCGAGAAGGATTGAGCACCGTTGGCCATATCTCCAGCGCGAATATTAATGCCCTCCAACTTTTTTATATTCTCTTGCAGCTTGTTCCCAATCATTTTTGGTAGGCTAGTGGGGTCATCATTTGTTGCATATCCATATTTCATCTTTATCTGGTCAACTTGACTGACTGATGTGTCGTCTTCAGGTTTTCTATTCCCTGAATTCACCTTTTCTTCTGTCCTGGGCTTCAACTTTTCTCTTAGGCTTTGGAATCCCTTGCTGATTTTCTGTTTGCTTAGACCTGGGAAGTGTGGTCCTTTCTGCTTTTGCGGGTTATCATCAATGTTGATATCATCTATATCTAGTTCAATGTTCTCGTCATCTTTTATTGAACTGTTCCTCTTCTCAGATACTGGAGCAAAATTAGCACATGAAAATATTGAAGACAGCTCTTCGGAAGTTGTTGCAGTAAATTGTTCATCTCCATTTGCATCGCTCTGTTTTCCCTTGCTTGCTTTAGTATCTTTCATAATCATTCCGAATATGCCCTTTTTCTTTTCTCTGGGGGACTTCACTACATAAGAAGATTCTTCCCTGGGCGAGTTGTCTTTTCTGTATATTGTATTAATGCTGTCTACATGCCTGTAGATGTCATTCTGACAGAGAGTAGAGAAAAAAAATGTCTCCTCTCCATTAACCAAGATGATTTCTCCATCAGATGAACATGCTATGGAGCTAGAAGAATTCAAGTTTCTTGTATATGAAAAACCTCTTAAAGAGGCTTCCTTCAATATAGATAAATCTGGGAGGGATCTTATCTCTATTTTGCCATTGGAGAAGACAAGTAGAAGTCCAATTTCAGAAGAAACACTGTGGATAAGAGATGCAAAACAGCAACTACCATTTGGTTTCTTCTTATTGATTATATTCTTTGTTCCCTGAATTGCATGGCTCAAGGAAAATAAGCGGATTGCATTTTCAGTGCAAAGCAATAACAGTGATTCTTTCGATACTGTATCGTGGGTATCTGACAACGATGGATCATCTGGTGATAATTCAAGTGTCTGCATCAATAGGGCTCGGGAGGGTTTGTTTGTCTGAACTGGGTTGGTATTCAAAAGTTTTCCAGTTTCTTCCTCAAGAATATATATAGTTGAATCTTCCATTCCTACTAGCAAAAGATCCTTGTCGTAGCCATTATGGCTGTACATTTCAAATTGCAAAGATGCGATTCCACCAGATACCCGACACTCAAGCTGTTTTTGATACAAGATCGATGCATCTTCAATGCTGACAACTGATACAATCCCTTTTTCTGTTCCAACAGCAACACGCTTTGAGTTCGAGATCAAAGAGATTGAGGTTACAGCGCCTTTAAGCTTTATACATCTGACATTATAGCTCTCCCCTTGCTTCGCATGTAAAAAGGAGAATATGTTATCGCTGGAGTCCTTTCTGAATGTGATTATACGGACCGTTCCACTCCTATCCCCACAGATTAGAATGCTGGATGACATATCAAACTGTAATGATGTAATAGGGGTGCCACTTGGACTATTCTCTTCATTCTGGTGCTTTATCATTAAATTCTGCAGTAAAAGAGGACATGATGCATCCCAAAACCTTATGGTTCCATCAAGATGTCCAGTTACATAGAGATTTCTGGTCTTATGAATGTCGGCAGAACCTGTGGAAGTCTGATGTTTATCTTTCATTGAAAGGAACCATGGGTATTTGGTGGCCAATGATGAAAAATAGTCCTCATCCAAAGAAGTCGCAGCTGTAGGGCTACTGGTATAAAACTTTGCAGCGGTGATGCTTGGATCACCATAAGGTAGCTTCACAGATGAATAGTTTGGAAGTGCTAGTGGCGATCTTGACTGAGCATGAAGAAGGTAGCGCTCAATCTCTGAATCATCATATAAGCAAATTTGACCAGATTTCAACAAGAGAACAAGAGCACTTTGTTTGTGCTTATTTGGGTCACTAAGCCCTGAAACAAGTTCCATTCCTTGGCAGGCTTCTGTGAGAGGCAAAACCATCTTTACAATTCGTGATTCGCTCTCTTCGTTCAGAATCAGGACCTGTGTTTAAGGAACATCAAATGAAAGGTTGAATGTTCTTGCTGAATGTCAACCAGTGTCGGTTAACACAACATTATTTAGAAAAGAAATAGTAGTTTCAGCCATGTTCAAATATTGTTTCGAGCAAGAATTTCTTAGCCTTTCTAGGATTCTAGCTGAGCATTTATTTTAAATAATATATCATATTCCAAATCAGCTAGTCTTAGAACAGGTAACGAACCAGTCTAGATCAATCTTAAGAAAAAGGGAGTAACTGGGAGGAGAAAAAACAGGAAGAGTCAAACCCAAGGAGAAAAAAGGCCTGGAGTTGAACCTGGCTGGGCAGGAGAGTAGCTTCACAACTAACCTACCAAGTAACAGTTGGCTCTGAAAACAGTGTTACAGACTCCTAAACAAAGAAACTGTTACACTATGTGGTAGTGTTGCAAAAGCATGTTAGCGTTCAGATGCACTGAACATGAAAACATAGAATCAGTATCATCTTAATTGCTTGAATTTATTTCACTGATATTCTTGGTAGGCACACATGATGAATTGCACTAATCAAGTTGGTTGCAATAAGCTAAAGTCATAACTGGTCTACAAGTTCAAGAACTAAAAAAACATGTGACATTTACAAAAACGGCTAAGACTGAAAAGTCAAAACGGCATGGCAGTCCAAACTTGTGGGGGGGATAACATAAAATGCACTAATTTAGTGTTTCACCTGAAATAGGTATGCATGATCACTGAATCCATTAACATACAAACGCCCTGCCTTTCCGTCACTATTGACCCATCGCAAAGAGACTATAGACACCCTGTCTAGCTTGTATCCAAGGTTAAGCCTCTGAAGAGGTAGGTTTTGATTGCCCATCGATGAGAGATTTTGTGCATTTAAAATATCAGGAATAGACCAAAGATATATATCACCACTATCAAATCCAATAGCAATTTTGCTTCCCTTGGCACAAGCCCAGCATGCCGATGTTACAGCTTTAGCCTCCTGATGTGACTGTTGTTGCATAGATTTGCCGGATAAAGATACCACTTTGCTCGTCTTAATATCCCACAAAGACATAATCCCATCTCTGAAGATAATGAGCACTCTGTTATTTTCAGCCAAAGGCTGTGGCGATACAAATGCAACTTCAACCTCATTACCAACATTTGCTCCAGAACCATAAGATTCAGAGAAAGGAATCCAATATGGCATGTCAACTAGACATGTCTGACCCAAGTCAAGCTTCAACAGGGACACATTCCCAAAACTATCACCCACATAGATGTAGAAGCTATTCTGCAGAACGGAAAATGCCGTGATTTCCTTCTCGAACGGATGCACATAACACAACTTCTTTGTGTCGATGTCCCAAATCTCGATCTGGTTCTTGGCGTTCACGTTCAGGAGAACCCTTTGCCCCTCGGCAAACCGCAGGAACTTGGAGGGGACGGGGGACGGGGATTGGAGCAGCGCCTGCGTGTTGTCGCGGCCGAACAGCTTGATCTGCCCATTCCTGATGGCGACGGCGAGGACGTGGAGGGCGGGGTCGTAGGCGAGGAGCGCGGCGTCGGCGGGGACGCCGTAGTGGAACGCCAGCCGCGGGCTCACGTCCTCGGCGCGGAGGCCGCTGATACCTCCGATGCGATGCTTCTTGGAGGCCTTCTCCACAAGCTTCCTGACGAACATGGCCGATCCACCACCACCACCACCACCAGACGAAGAACACCAACCAAAGAATCCACGGACAGACGAACCAACACTCCGGCAACAACTTCTCTCGCAGTTGCCAACCTCTTGTTCAGGAATCAGGACGGAACAGGCTCGAGGAAACCAAGAACGAAACCGACCAACACAGGGTCCGTGAGAGAGAGGAAGAAAACGAGAGGTGGCAATGGAAGCGTTTGTGCCTGGAGAGCAGTCAAGGATTAGGTTGGTAGGGGCTTCTCTTCTTCTGCTTCTCCCTCCTAATGCTGCACACTGTCTGAGACTGAGTACTCCTATTTGTGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0276200.1 | 4 | 28300628 | C | T |
| Osa04LNT0276200.1 | 4 | 28297929 | A | C |
| Osa04LNT0276200.1 | 4 | 28298498 | G | A |
| Osa04LNT0276200.1 | 4 | 28296875 | G | A |
| Osa04LNT0276200.1 | 4 | 28298305 | T | A |
| Osa04LNT0276200.1 | 4 | 28298607 | C | T |
| Osa04LNT0276200.1 | 4 | 28299360 | T | A |
| Osa04LNT0276200.1 | 4 | 28300118 | G | A |
| Osa04LNT0276200.1 | 4 | 28302795 | A | G |
| Osa04LNT0276200.1 | 4 | 28302966 | A | G |
| Osa04LNT0276200.1 | 4 | 28303270 | A | T |
| Osa04LNT0276200.1 | 4 | 28303381 | C | A |
| Osa04LNT0276200.1 | 4 | 28304125 | C | T |
| Osa04LNT0276200.1 | 4 | 28304458 | T | A |
| Osa04LNT0276200.1 | 4 | 28299394 | G | A |
| Osa04LNT0276200.1 | 4 | 28298428 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0276200.1 | osa-miR7694-5p | Translation | 5.0 | 21.899 | 1 | 24 |
| Osa04LNT0276200.1 | osa-miR1861o | Cleavage | 3.0 | 12.19 | 1 | 22 |
| Osa04LNT0276200.1 | osa-miR1861o | Cleavage | 5.0 | 22.114 | 1 | 22 |
| Osa04LNT0276200.1 | osa-miR159a.1 | Cleavage | 4.5 | 18.5 | 1 | 21 |
| Osa04LNT0276200.1 | osa-miR159b | Cleavage | 4.5 | 18.5 | 1 | 21 |
| Osa04LNT0276200.1 | osa-miR426 | Translation | 4.5 | 12.487 | 1 | 21 |
| Osa04LNT0276200.1 | osa-miR444a-5p | Cleavage | 5.0 | 16.392 | 1 | 21 |
| Osa04LNT0276200.1 | osa-miR1423-3p | Translation | 5.0 | 20.293 | 1 | 21 |
| Osa04LNT0276200.1 | osa-miR1442 | Translation | 4.5 | 17.705 | 1 | 20 |
| Osa04LNT0276200.1 | osa-miR1861a | Cleavage | 3.0 | 12.19 | 1 | 22 |
| Osa04LNT0276200.1 | osa-miR1861a | Cleavage | 5.0 | 22.114 | 1 | 22 |
| Osa04LNT0276200.1 | osa-miR1861c | Translation | 2.5 | 13.913 | 1 | 22 |
| Osa04LNT0276200.1 | osa-miR1861d | Cleavage | 3.5 | 12.19 | 1 | 22 |
| Osa04LNT0276200.1 | osa-miR1861e | Translation | 3.5 | 13.913 | 1 | 22 |
| Osa04LNT0276200.1 | osa-miR1861f | Translation | 4.5 | 13.913 | 1 | 22 |
| Osa04LNT0276200.1 | osa-miR1861i | Translation | 4.5 | 13.913 | 1 | 22 |
| Osa04LNT0276200.1 | osa-miR1861k | Translation | 3.5 | 13.913 | 1 | 22 |
| Osa04LNT0276200.1 | osa-miR1861l | Translation | 4.5 | 13.913 | 1 | 22 |
| Osa04LNT0276200.1 | osa-miR1861m | Translation | 3.5 | 13.913 | 1 | 22 |
| Osa04LNT0276200.1 | osa-miR1862d | Cleavage | 4.0 | 22.592 | 1 | 24 |
| Osa04LNT0276200.1 | osa-miR1862d | Translation | 4.0 | 17.559 | 1 | 24 |
| Osa04LNT0276200.1 | osa-miR1862e | Cleavage | 3.0 | 22.316 | 1 | 24 |
| Osa04LNT0276200.1 | osa-miR1862e | Translation | 4.5 | 17.623 | 1 | 24 |
| Osa04LNT0276200.1 | osa-miR2094-3p | Cleavage | 5.0 | 18.502 | 1 | 22 |
| Osa04LNT0276200.1 | osa-miR2121a | Cleavage | 5.0 | 19.901 | 1 | 24 |
| Osa04LNT0276200.1 | osa-miR2121b | Cleavage | 5.0 | 19.901 | 1 | 24 |
| Osa04LNT0276200.1 | osa-miR2864.2 | Cleavage | 4.0 | 19.963 | 1 | 21 |
| Osa04LNT0276200.1 | osa-miR2870 | Translation | 5.0 | 17.462 | 1 | 21 |
| Osa04LNT0276200.1 | osa-miR2929 | Cleavage | 4.5 | 13.368 | 1 | 21 |
| Osa04LNT0276200.1 | osa-miR5158 | Cleavage | 4.5 | 14.201 | 1 | 24 |
| Osa04LNT0276200.1 | osa-miR2275d | Translation | 4.0 | 18.081 | 1 | 22 |
| Osa04LNT0276200.1 | osa-miR2275d | Translation | 5.0 | 20.835 | 1 | 22 |
| Osa04LNT0276200.1 | osa-miR1861a | Translation | 4.5 | 13.913 | 1 | 22 |
| Osa04LNT0276200.1 | osa-miR1861b | Translation | 4.5 | 13.913 | 1 | 22 |
| Osa04LNT0276200.1 | osa-miR1861h | Translation | 5.0 | 13.913 | 1 | 22 |
| Osa04LNT0276200.1 | osa-miR1861j | Translation | 5.0 | 13.913 | 1 | 22 |
| Osa04LNT0276200.1 | osa-miR1861n | Translation | 4.0 | 13.913 | 1 | 22 |
| Osa04LNT0276200.1 | osa-miR1861o | Translation | 4.5 | 13.913 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0276200.1 | 4 | nan | Resistance or Tolerance | Other soil stress tolerance | RM5586 | RM3916 |
| Osa04LNT0276200.1 | 4 | qCTS4-3 | Resistance or Tolerance | Cold tolerance | RM241 | RM317 |
| Osa04LNT0276200.1 | 4 | nan | Morphological trait | Root | RM3288 | RM5503 |
| Osa04LNT0276200.1 | 4 | gpp4 | Morphological trait | Seed | RZ569 | RZ565 |
| Osa04LNT0276200.1 | 4 | pss4.1 | Physiological trait | Source activity | RZ740 | RZ590 |
| Osa04LNT0276200.1 | 4 | rfw4a | Resistance or Tolerance | Drought tolerance | RM349 | RM1136 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)